Array 1 189765-188541 **** Predicted by CRISPRDetect 2.4 *** >NZ_VISR01000011.1 Streptomyces sp. BK340 Ga0307703_111, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================ ================== 189764 29 100.0 32 ............................. TCCGGCGACCTGTCCAAGACGCTGATCACGCA 189703 29 100.0 32 ............................. TTGCAGGCCGCTGTCCCGGCCGAGGCCTCGGT 189642 29 100.0 32 ............................. TACTCGGCCGTGTTGATCGGCCTCTACCTGCT 189581 29 100.0 32 ............................. ATTACCCGCGATTGGGAGCGCCGCATCCAGCG 189520 29 100.0 32 ............................. TGGCCGCGTAAACCGGCGGCGCTCGACGCCGA 189459 29 100.0 32 ............................. CACTGCGTCGCCCCGGGACACGTCGAGGACGC 189398 29 100.0 32 ............................. TACTTGCCGATGATCATCCGGAACCTGCGGGA 189337 29 96.6 32 .........................A... AAGGGGATCCGGGCTGCCCGTCAGTTCGCTAA 189276 29 93.1 32 ...G.....................A... GTAGAGGCCAACGCGATGCTGATCCGTCACGA 189215 29 93.1 32 ...G...................A..... GAACTGACCATGAGCGAATGGCGGACGGCGCG 189154 29 86.2 32 ...........TT......G.....A... TGATAGAAGCCGAGCGCCAGGCCCGCGGTTCT 189093 28 86.2 32 .....G......-.....C......A... GTGTCGATGTGGGCCCAGTCCTTGCGGCGCAT G [189078] 189032 29 89.7 32 ...C...T...A................. TCACGGGTGATCGGGCGGGTAGGCCGGTACTC 188971 29 89.7 33 .C...........AG.............. AAGTGGGGAAGACACCCGGCACGACGTCGGCTC 188909 29 82.8 128 ...C.AA.....TA............... CAGAGCCGGACTGCTTTCCGCTGGACCAGGCCGGGCCGCTGCGGCCTCGCTACCGCCAGGAGCTGCCTCTAAAATGCAAGATGAGTAAAGGACCTGCTAAGTGCCCGCAGAGCCGCAGGTCATGAAGT 188752 29 86.2 32 ...C.........AG..........A... CACGTCTGACCGTCCCGCAAGCCGCCGGGCTG 188691 29 82.8 32 ...C.......A.AG..........A... CCGGGACGGAAGCGCCGAACCCCCGGGGTGCG 188630 29 86.2 32 ...C.........AG..........A... CCGACCGTCACCGGTTCCCGGGGCGGTAACGC 188569 29 86.2 0 ...C.........AG..........A... | ========== ====== ====== ====== ============================= ================================================================================================================================ ================== 19 29 92.6 37 GTCTTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CTCCCGGCGCGAACATGTACCCCGGCTCATCGCACAAAGAGCGGAACAGCTCGGCGTGCTGGGCCTGGAAACCTGGGGTGATCTTTCCGAGGTCGTGCAGCCCGGCCCACAGCGACAAGACCGCCCGGCATTTGTCCACCGGCAGGCCCATCTGTTGGGAGACCCGGCGACGTGTGCGGTCATGCAGCAGCTCGTCCCACAGGACTGCGAACACCGCAGCTACATCTGATAAGTGACACATAACCGGATATGGGCGGTCGAGACCCCGCTCCTTGCCCCACAACCGGGGGTCCGGGGAACCGCCGGTGAACCACGCGTCATGAGGGCCTGTCATGACTCACTTGCTATCAGCAGCCACTGACAATGGCGCTGAACTGCAGGAACGCCGAACATGCCAGACACGAGGGCCTACAGTGGGACCTTGGGAGCGGCAGATGACACCAATCAGCCGCCACAGTAAAGAAACTGCAATTCCCTCATGACGGCGCAGGTCAGGAAGT # Right flank : TCACCTGGGCGGGGCCGCGCCGTCCCTCCCGGTCTCCCCACGGGAGGGCCGACGGCTGCGCAGACCCCGCGCCGTGGGCGCCCTCTACACGCTTGCCGCGCCGATGCGGCGTCTGGCCCGCTCGACCTGGCGCAGCAGCAGGTCCGCGAACTGGATGATCTCTGCTGCCTCGATCGGGTCGTCGAAATCGACGGTGTGGTGGCTGGCGGGGTTCTTGTTATGCGCCCATGGCGCCGGCGAACAGGTTGGCGGTGGCCGCCTGCTCCCCGCCCTCGGCTTCAGCGTCGGCCAGCGCGCCAGCGCTAGCTGGCCCTGCTGGCACCTTCAACTGAGCGGGGCTGGTGACCGGCCTTCTCCGCTCGTGCCCGGCGCAGGGCGGCGGCCTCGGTCGCTGCGGCCTGACGGCGGCGCTGTGCGCGGGCCCGCTCGATCATGGCTGGCGCATCGTCTGCGACGGTGTCGGGCTCGGGAAACGCGCGGCGGGACAGCTCCCGCATCGC # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:-0.46, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 199553-201594 **** Predicted by CRISPRDetect 2.4 *** >NZ_VISR01000011.1 Streptomyces sp. BK340 Ga0307703_111, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 199553 29 100.0 32 ............................. TCGGGTCCAGCTTGTGCACGGCGCCCCCGTAC 199614 29 100.0 32 ............................. AGAGGTCCCCGTGACCACTGAGATTACCTTCC 199675 29 100.0 32 ............................. GTCGACGGCCTGTTCAACAGCAGCGGCGAACT 199736 29 100.0 32 ............................. CGAGCGAAGCTCTCCATGAACTTCGAGAATCC 199797 29 100.0 32 ............................. CGGCTCCCCAGCCCCATGACCGTGAAGACCGC 199858 29 100.0 32 ............................. TTCCCGGACGTCTCCTCCGCCGTCTGCGAAAC 199919 29 100.0 32 ............................. GAGACGAGGCTGTCCTGCATCAGCTCGGATGG 199980 29 100.0 32 ............................. CTGGTAGGCGAGAGCGAGGTTCCGCCACACGT 200041 29 96.6 32 ............................T CCCCTTCCCCCTCCGAAGGGGAGACTGTGTTC 200102 29 100.0 32 ............................. GCGATCAGGGTGCTGCCCAGGACGTTGAGCCC 200163 29 100.0 32 ............................. TGAGGTAGACCCCCATGGTTGCAACACGAGTC 200224 29 100.0 32 ............................. TCATGGAGGACACGGCGTCGACGATGTACACG 200285 29 100.0 32 ............................. CATGCAATTTCAGGATGACTTGGCCGCGGGCA 200346 29 100.0 32 ............................. GCAGGGTGCTGCCGTCGGCGAACGTGCCGTCC 200407 29 100.0 32 ............................. GGCATGTCCCAGGCCCGCCCCTGCCACAACAC 200468 29 100.0 32 ............................. ATGCAGGATTTGGCCTCGGCGTTCGGGTCCGG 200529 29 96.6 32 ............................A TTTCCGGCTCGGCCTCGTCGGGCTGCGCCTGC 200590 29 100.0 32 ............................. CCGAAGGTCAGCCTCGCGCACGTCGTGTACGC 200651 29 100.0 32 ............................. AAGCTCGGCGAGCGGCACGGCTTCAGTGTCGT 200712 29 100.0 32 ............................. CCCACCACCAGGCCCGCGGTGCGGGCGGTGGC 200773 29 100.0 32 ............................. AACCTCGACAAGGTCGGCAAGCGGGGCGGCAC 200834 29 96.6 32 ............................A CGTTCTCAGAGACGACTGCCTCCATGAACGTC 200895 29 100.0 32 ............................. CCACCCGAGTCGGGGGAGGAATCGCCGGAACC 200956 29 100.0 32 ............................. CCGTTCACCTACCACCCGCATCCGAAGACGAA 201017 29 100.0 32 ............................. CCCGCCACCAGGGCTGGCTCACCGCCCACAAC 201078 29 100.0 32 ............................. CATGTCGTTAGGCATGGGTGGTCCCCTCTCAG 201139 29 100.0 32 ............................. GAGCACCCCGAGCCGTGACCGATATCCCCCAG 201200 29 100.0 32 ............................. GTCCCGTAGTCCTCGCCGTTCTCACCGGTGAT 201261 29 100.0 32 ............................. GCCGCCGTCGACTTCGCCAAGCAGATCTGCCG 201322 29 100.0 32 ............................. GCCTGGGGATTCCCTCGGCTATCGGCGGCCGC 201383 29 96.6 32 .....G....................... GGGTACATCAGGCACCGCCCTTGGGGGCCTGG 201444 29 100.0 32 ............................. ATGCCCCGGACCGTGATGGCCCGGGGCGATCG 201505 29 100.0 32 ............................. CCGATGGGGGGCACGGTCGACGACGCCAACCG 201566 29 79.3 0 ............T.........GCTAT.. | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.0 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCGCATCGTCCACGACATCCAGGAACTCCTCGATCCCGGTGGCAACAGGGAAGCCCCCGACCCCGAGGAGCAACTGATCGACCTCTGGGACCCTGTAGCCGGACCTCTGCCTGGCGGAGCCAACCACGGAGGTGGGCCATGAGCCCTGCACGAGTTGAGGTGCACCCAACATGGCCGCGATGATCGTCCTCTCCGCCTCCGCCGTCCCCGACCACCTCAGAGGTGCCCTCACCCGCTGGCTCCTCGAAGTCACGCCCCAGCTATACATCGGCACGGTCTCGGCTCGCATCCGCGATGAGCTCTGGGAGGCCGTCACTGCCTGCGCCGGCGACGGCACCGCCGTGTTGGCCTACCCCAGTAACAACGAACAGGGATTTGAGGTACGCACCGCTGGCACCCAACGCCGAACACCAGTCGATTTCGACGGGCTTACGCTCATGTCGTTCGCGAGAGATACTAAAGAACTAGCAAACCGGCTCTAACAGCGCAGGTCAGGAAGT # Right flank : GGGTGCGGGACATCTGTGGCGAACGGCGTATGGCATTCCGGGCTCGAGAGGGTTCTCGAGCTGGACAGGGAAGACCTGGGCCTCGTTGACGCAGCCTCCAGCCTCAGCGTGCCCGACCTGATGGAAGAGTTCATCCGCCCCGTGGCCGAGCGGGACCGGGACCTGCTGCTCTGCGTGGAGATCAGCCATGGGCGCCCCTTTACGTGCGCAAGCACCGCGGCCCCGGCGGCGCCCTCCGCCTACGTGCCGCTCACCTCCCGACGACCTGCCGTGTACGGAGAGTCTCCTTCCCGCCTGCCGATCCGACGAGCTGACGCAGCACCGCAGGTGGGCCGAGGAGGAAGCCCGCGCAGCAGCCAGTGCCCGTCTTGCCCGCCGCCAAGACAACGCGGGCGGCGTGCTCCGACACGCCGAATGGATGGCCTTCAGCAGATTCCAAACCCCCTGGCAAGACGGGCATCTGGCCACTGAACTCCCTTGTAAATAGGGCTTGTTCGCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 52029-51638 **** Predicted by CRISPRDetect 2.4 *** >NZ_VISR01000020.1 Streptomyces sp. BK340 Ga0307703_120, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52028 29 100.0 32 ............................. CAGATGGAGGAAGCAGCATGAGCGGCGAAACG 51967 29 100.0 32 ............................. GATCCGGTTGAGGTAGAAGCGCTCAGCCTGCG 51906 29 100.0 32 ............................. ATGCCCTACATCACCGTGCTCTTGAACCAGAA 51845 29 100.0 32 ............................. CAAATCATGCTGTTCGTCGGCAGGAAGGGCAG 51784 29 100.0 28 ............................. AGGTCTTCGGAGCGTAGGCGCGGGAGCG 51727 29 96.6 32 ........T.................... AGGATCCGAGACCCCTGGCGATGCCTCAACAC 51666 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGCGGTTTTCCCGCTGAGGCGGTGAGTTCACGTAGCGCCTGGCGGAGTGCGAGCCCGCGCCGCGGGTTGTCGTCGATAGCCTGCGCGGCTTCCTCACTCGCTGGTTGCTCGAAATCTTGCCCGGCGTCTTCATCGGCAGCCCCTCCGCCTGTGTCCGCGACGTACTGTGGGATGAGGTCCGCCAGTATTCTGGCCAGGGTCGCGCTCTGCTTGCCCACATCACCAACAACGAGCAAGGCTTTACCTTCTGTACCCATAAGCACGCCTGGCACCCCGTCGACCACGAGGGCCTCACCCTGATCCGCCGCCCCAACGACCGAGCCTCCTCCTCCTCGGTGACCCCACCCCAGTCGGGTTGGAGCAAGGCGGCCAAGCGCCGCCGCTTCGGTAAACGCTGACCCGCTGGACGCCTGATGTGCCCTTATTTACAGCAGATGTCGGATTACATGGAAGTGCTCAATTTCCGTGACCTGCGGTCATAAACCCGCAGGTCACTGAGT # Right flank : GAAGCGCTCACCTGCAGAAGCTCGACCTGGTACGCCCACGCCTTGATGTCTCCATGTGCTTGTCGGCGGTGATGTCGGCGATGCGGCCGATCGCGTGCCGGGCCGCCTCGACGGCGATGACGAACAGGATCGGGATCACCGCGTGCATGCCCACGCCCAGCGGGTTGGGCCAGGCTGCGGCGCCGTTGAAGGCGACGGTCGCCGCCGTCAGGAGCCAGGCCGTCTGGCGCAGCAGCGGGAGGGGGGTGCGGATCCAGGTCAGCAGCAGGTCGAGGGCGAGCAGGACACAGATGCCCGCGTCGATACCGACCGGGAAGACGTAGGAGAAGTTCCCGAAGCCCTTTTTGATGGCCAGCTCACGGACGGCCGCGTACGAACCGGCGAAGCCGATGCCGGCGATGATCAACGCACCGGAAACGACCACGCCGATGAGATGCGGTGCATCCGAGTCAGCTGCAATGGCGCGGCCACTCGTACTCCCCTTCTGCATCAGGTGATGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //