Array 1 5063-3837 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABZED010000059.1 Salinispora sp. H7-4 sequence59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 5062 30 100.0 37 .............................. ATAATCACAGGACTCCATTTCCATTACTAGGTCCCAC 4995 30 100.0 38 .............................. GTGTCGGGTCGGGTGGTGGCCCGGCGCTCGGCGTCGCC 4927 30 100.0 37 .............................. ATGAGGGGGCGGTGTTGCCCGGGTGCTTCTTGGACGC 4860 30 100.0 36 .............................. ACTGGATGTCGTGCTCGGGGTGCTGCTCGCTAGCAG 4794 30 100.0 37 .............................. CGGCGAGCCTGCGACTCGCTCTCCCCGGCCGGCGGGG 4727 30 100.0 37 .............................. GCAGGAGGTCGACCGCGATGATCGCTACTGGGGAGCG 4660 30 100.0 36 .............................. GTGCACTGGGCGCGGCCGGTACCGCGTGGCTGATCG 4594 30 100.0 38 .............................. TGGATCAGAGCGCGACCTTCCAGGCCGTGGCGTTCCTG 4526 30 100.0 37 .............................. AGTCTGCCGACCAGCTGCACCGAGTCGACCACCTCCG 4459 30 100.0 35 .............................. ATGGCCGGCACGCTCCAGCGCACCGGCACGCGGGG 4394 30 100.0 36 .............................. AGGCTGCACGTCAACGGCTTCGGCGCGCCTGACCCT 4328 30 100.0 36 .............................. CGGTTGTGTACGTCGTTGGCGATGGCGTAGGCGGCG 4262 30 100.0 38 .............................. GGCTCCTCGACGGAGATAGCGACCTCGCGACCAGGGTC 4194 30 100.0 34 .............................. GGTAGCGACGATTGTGTCCGTTGGGCGAACCCTC 4130 30 100.0 36 .............................. GCGCCTGGATCACCGACGGACCCATCACCCGTTCCA 4064 30 100.0 34 .............................. ATCTGCTACCCAGCAGTTTTGACCTGGAGAACCG 4000 30 100.0 38 .............................. ATGGCAGTGCGATCCTTCGCAGACAACGGCGAGCTCTC 3932 30 100.0 36 .............................. ACGAACAGCAGCACCACTGCGAGGGCGCTCCACACG 3866 30 96.7 0 .............T................ | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 99.8 36 GTCCTCATCGCCCCTACCAGGGATCGCAAC # Left flank : CCAGCACCGCAGCCTCGGCCGGAAGGTCGCCTACGACGAACTGCTGTACCTGGAAGCGCTGCGCCTGGCCCGCTACTGCCTGGAACGCGAGCCGTACAAGCCGTTTCGGATCTGGTGGTGACCCGTGTACGTGATCGTCGTCTACGACACCGCCGCGAACCGCAACCCCAAGATTTTGCGTACCTGCCGCCAGTACCTGCACCACGTCCAACGCAGCGTGTTCGAAGGCAACCTCAGCGACGCACAACTCCGCCGCTTCCGGAGCGCCGTCGACAAGGCGATCGACGCGTCGTACGACAGCGTGCTCGTCTACACGTTCCCTCCCGGCACGACTGGCCAGCGGCAGGAGTGGGGGCGGTCTCAACCCAGCCCTTCAGATATCTTGTGATCTTGGCCGGTTCAGCGACATGCCGAGGTAGATTGCACTACCGGAGGTTCGCTGCAAATTGAGCACGCAACTGGCCAGTCAGAGGGCCCATGACCAGGGACTTAACGTTGGG # Right flank : TAGGGCGGAGTGGCGCACTGTTCTGGTCCAACGTCTCTCCTTTTCTGGACACTTCCGCGATCTTGGCGGACGGGCGCTTACTCGTAGAAGCAAGCGGCCCGGAGCATGTCGGCGATCAGGCCCCAGGTCATTTGCTCCGGCACGGGCTCGCCACGGTTACGGAAGTAGTCGTCCATGCCGTCGATCCAGGCGCTGAGGGCTTCGAGGTAGCGGTCCACCGTCGGGTTCTCCCAGTCTGCGGGCCCGGCTGCGGCCTCCTGGCTGAGTCGTTCAACGAAGGTGACGAGGTCTGCGCGGCTGCGTACCCAGCGTGTGTCGTCCATCGAGCTCATGCGGTCAAGCCTCGCTTGGAGCTACCTGGCCGCCAGCGGCGGGCTCGTAGACGACGGAGTTGGCCGGTTCTCCGAGTTCGGTGAGCAGGTCGTGGATGCGGGAGAGCGCGGCGGTATGTCGTTCGACTTCGCGTGGCCAGCCTCGCTCGGTGGTGTCCCGGAAATGAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACCAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.50,-4.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 13569-14871 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABZED010000059.1 Salinispora sp. H7-4 sequence59, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================== ================== 13569 28 100.0 38 ............................ CTGCTAGTCGGGCTGGCCGCACTGCGGACCGGACAGGC 13635 28 100.0 38 ............................ TCAGCGCCTCCCGGGGCTGCCTTGTTTTCCTCCTCTGC 13701 28 100.0 39 ............................ ACCTTAGAGAGCCGGAGCTGGAGAAGGCGGCGCACAAGC 13768 28 100.0 37 ............................ ATGGCCTGCTGATAGGTGAAGGTGGTGGTGTGTGGGC 13833 28 100.0 37 ............................ CGGATGAGGCTGATGGTTCGTTGTTGCCGGTGCGCGC 13898 28 100.0 40 ............................ GAGTAGTACCCGACGCGGCGTGGCAGGCCCGTCACCAGGT 13966 28 96.4 38 ......................T..... ATCTGCGCCGCGGCCGCATCCGGGTCGGCCGCGATGGT 14032 28 100.0 42 ............................ GCTGTCTCCGGCGCGTACGCCGCGACCCGGTAGGCGCCCCGT 14102 28 96.4 38 ...T........................ GTCGGGAACGTACCCGGAGTTCCAACTCGGCGCCAGGT 14168 28 100.0 39 ............................ AGCATCACGCCAAAGTGTCCGCCAAGCGCGGCAGCCTGC 14235 28 100.0 38 ............................ ACCCGACCCGCCGCACCATCACCGCCAGCCAGGTTCGC 14301 28 100.0 41 ............................ TCGGTGCGGCCGTCGATGGGCTGATCGTTGATGCGCGAGGC 14370 28 100.0 41 ............................ ATCGAGATGCGGATGGCCAGCGGTGGACGCGCTCGGCAGGC 14439 28 100.0 41 ............................ CGTGACACACCCAACCCGGCCACACCGCCGGCCGCGCAGGC 14508 28 100.0 40 ............................ AACAAACCGAGCAGGAACGCCGTACCCGCACAGCCGATGT 14576 28 100.0 37 ............................ ATGACCAGTGCCGCGGGCCTGCCGGCCGTACGCGAGC 14641 28 100.0 40 ............................ AGGCTCGGGCCCGTGAGGCGTCCTTCGCGGAAACCCTGGC 14709 28 100.0 40 ............................ AGGTGCCGTCGCCGCCGGGCTGGCCGCCCTACTGGTCGGT 14777 28 100.0 39 ............................ ACCTTCGGACTGCCGGCGTAGGCGAGCAGAACATCACGT T [14792] 14845 27 89.3 0 ..C.....-...........G....... | ========== ====== ====== ====== ============================ ========================================== ================== 20 28 99.1 39 CCTCATCGCCCCTACCAGGGATCGCAAC # Left flank : TGCCAAACTCCACCACACCCCGAGCACCGGCCGCATACCGGCCGCGCTGACGTCGCGCACCAGGAAACACCGGAGCACTGTGCGCGATCGGAGTCATGCCGTAGGGCCCTACACCCTTTTCATGTAGCCGCTCTCCGAGATCAGGCTGCGCCACCGCAAGCAACTGGTACGCGATCCCGCGCCCGGGAGCCAGCACCATCGGCCACGGAATCTCCGACGCCCGCGTCGCCACGTGCACCCGCAACCGCACCAGCACCTCCCTGCTCTCCGGTCAACGACGCGGTCACCCTAGACAGACCCACCGACAAGAGAAGCGATCTGTCACATGAACGACGCTCCGCGCCAACGCCAGATCCAGCACCTGACGGGACCGAGACTTTGATCATCTAAGCCGATTGCAGCGACACTCCGGGGTAAGCTGCAGCACCGGAGGTTCACCGCAAAATGAGCCAGCAACTCACCCAACACGAGCCCCCTGATCAGGGACTTAAGTTTGGGGC # Right flank : CGCGGTTTCCGCCAACCCAGTACGAACCATCTACCCGGCAGTCCTCACGATGCCTTCGCCTGGCGACGCCCAGATATGACTGTTGGCCGGCACCCGGTTCGGGTGCCGGCCAACAGTTTCTTTCCCCCTTGTGTGGGTCAGGTCTGTGGGTGGGGGTTTGTGCGGTGGGGGTCAGCTGGTCCAGTGCTCGGCCACGAGGTCGGCGGCCTGGGTTTCCCACTGGGCGTAGTGGAACGGGTACGCCGATACCTGGACCTTCTGGGCGGCTTCGGTCAGGGGCAGTTCCTGCCAGCCCTCGACCTGCTTGAGGCCCTTGAGGAAGGCGGTGGTGGAGTACTCGGGGTCGGTGATCTGCTCCACGCTGCCCCAACCGCTCGAGGGGCGCTGCTGGAACAGTCCCTGCGAGTCGTGGTCGTTGCGGTCGCCCAGGTGTCCCAGGTTTTCCAGCTTCGACTCCTGCAGGCTGGTGCCGATGGCCACGACGGCGGCGCGCTCGTCCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCATCGCCCCTACCAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.30,-4.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //