Array 1 378085-379637 **** Predicted by CRISPRDetect 2.4 *** >NC_022584.1 Streptococcus ilei, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 378085 36 100.0 29 .................................... TTTGTCATATTTCCCAGTTTAGAACCTGT 378150 36 100.0 30 .................................... CCTTGCGACTGTAGGAGACGACCAGCCTTT 378216 36 100.0 30 .................................... TAAAAATCAATTCTTTTAGATCATCACTCA 378282 36 100.0 30 .................................... CGTAGCGGACAGCTTCCGATTATTGGAATT 378348 36 100.0 30 .................................... TGAATTTATCGGTGACCGTGTGTTGATATA 378414 36 100.0 30 .................................... ATGAGGAAAGATGAATGAAAATCACACAAG 378480 36 100.0 30 .................................... TATGCTTGAACTTGCTAAGGCCTACAAGCT 378546 36 100.0 30 .................................... AGAGGGTATTTTTGGCAGAATTATAAATCT 378612 36 100.0 30 .................................... CGAAAGGGCAAAGAATGAATTGATGCGATT 378678 36 100.0 30 .................................... GGGTCTTTATGATAGTATCCATGGTCTGGA 378744 36 100.0 30 .................................... GAACCTGGACGATGGTGTCTTTGTTGATAA 378810 36 100.0 29 .................................... ATATCGTCCATGTCTGGGATAGGCCCGCT 378875 36 100.0 30 .................................... CAACACTGACGTACTGTCCAGCCGATATCT 378941 36 100.0 31 .................................... TCATAAATTATCAAATTGAACTTCTCTTACT 379008 36 100.0 30 .................................... ACGTTGTTTCTCACCACGTTTCGAACCTTT 379074 36 100.0 30 .................................... AAGCTACTGCGATATTAAAGACTGGAATGT 379140 36 100.0 30 .................................... GAAAGCGTCTCAGGACGCTTAAACGACTTG 379206 36 100.0 29 .................................... TAACGTATAGCGGAGGTTGAAGGCAAGCT 379271 36 100.0 30 .................................... TTTAACGTAGCTGAAAGCGGATGGGAAAGC 379337 36 100.0 31 .................................... CTAAAGGCTTCGGAGACTTTGAAGCATCACT 379404 36 100.0 30 .................................... AGGACGCAAGCTACACGTATCTCCAGAGTT 379470 36 100.0 30 .................................... TTTACAGCCGGACAAGAAATTAAGGCCGGA 379536 36 100.0 30 .................................... TCGCATAGACAATATAACGAGTACTGTCGA 379602 36 94.4 0 ....C......................G........ | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GATGATTATTTATCTTATAAGGAATTTGTTGAGTGTTGTGAACAATTAGAGAGATTAACTAATTATTGTAACATGTTATACACTATTTCATTTCCTTCAAATGAAGGTTATCTTCATGTCACGAAAGAAGTATTAGAGGAGATTAATATTGTCTCTGATTACATTGATCATTTTTATTCATTAGAATTTATGTATGAACGTTTTACTGATCAATATCCAATAAATCAAATACCTAGTAAACAAGAGTTTTTATCATCTTTAAGGAAGATTGGGCCTTATTTATTTAGTTCTGATATTCTTCATATGAGCTTATCAATTGAGGATCAAGTAGCATTGAGAATATTAAACAATTTGTACCAGTATGAAATGAAAATAAAATTCCATATTGAACCAGTCAACCCAATGTTATTGAAGTATTTAGAAGAATAGTATTGACGAGTTATGTCTAAGACTTTATAATGGTTTTTGAGAGGACAAAAATCAAAATTGACGAATTTGAG # Right flank : CTGAATGCGAGGGAATGGAAGTTGAGGAGGTTGAGTTAGTTTTAGAGCTGTGTTGTTTCGAATGGTCCCAAAACTATTATTTGTATGATATAACAGAATATTTAAAAAAATGAAGGGGTTTTCTATGGAGAGTGATGTGTTTTTTGATTATTTTTTAAGATCACTTAGGTTTTATTTTCGTGATAGGTGTAAGGATATTGGATTTATAAAGTTTTTTAAAGATGAAAATAATTGTTTTATTACTATAGAGGATTATGTTTTGGAATCATTTGTAGTATTGTCAAATATTTTGAGTAAGGATAGGATTGTGTTTACTTGTGGAATTATTTATAGTAAGGGGGTAGTTACTGGAGTAGAAGTATATATGAATGTATTAGAGTTAGAAAGATTAAATAAATTGTATAAGATATAGTTTTGATGAATATTAAAAAACATAAGGGTATTTATCTACGTGGGATGTGTGGAGTGATAGGATTAATGTTTCCTAGTTATAGAACTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //