Array 1 45729-46820 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYXO01000015.1 Dorea longicatena strain 2789STDY5834961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45729 36 100.0 30 .................................... CAGTCCGGCGAAAGTTCACGACTTATTAAT 45795 36 100.0 30 .................................... ACAGGAGATGACATAGACATACATTTTAGC 45861 36 100.0 30 .................................... TCATTTCATTCACCTACCACAATGCTCTCT 45927 36 100.0 30 .................................... AATGGTGTTTATTATCATCACAGTTTGCCG 45993 36 100.0 30 .................................... AGCCTGCTGCCCGTACGATTCTATCATCCA 46059 36 100.0 30 .................................... TACTAGCCTGTATGCTTTTATTTGTTCTTC 46125 36 100.0 30 .................................... TGTGTCTTTTTGTTATATCCCCATATTGCT 46191 36 100.0 30 .................................... TACTAGCCTGTATGCTTTTATTTGTTCTTC 46257 36 100.0 30 .................................... GGATACGGAAAAATAAAAATGGAAACTAAT 46323 36 100.0 30 .................................... ATAACCACCAAGTGTCAGAGTTCCAGAATG 46389 36 100.0 30 .................................... TGACTTCGCAACTCTGGCAGTTGTTCTTGT 46455 36 100.0 30 .................................... GAAACATCTGGTTATACTGGTTCTGTAAAT A [46469] 46522 36 100.0 30 .................................... ATACTCTGTTCTCCAAAATAAAAAGGCAAG 46588 36 100.0 29 .................................... AGAAGAGGATAAGCAGAAAGCCAAAGGTG 46653 36 100.0 30 .................................... GAAGCTGTTGGAAAACCAGACGGCCAACAT 46719 36 100.0 30 .................................... TAGACATTAGCGTCAATTTATTTTTTATTT 46785 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GCTTGTGTACCATACATTTTTACATCATTCTCAAAC # Left flank : TTGTAATTCTAACACCCGGACTTTTTGATTTCAACACTGTCCCGGTTTATGGTGCATCTGATCGTATTTTATTTTATGTTCTAAATTTGTTAACAATTTCTTCCTAATTCCATCACAGTTTTATCACAATTCAATTCTATACTAGGAATTGTTCAAGAGAACAAACACTTTAAATCTTTTTCATAACTTTTTCCTCAGGGCTGCACTCCTCCCTAATAATGCAGTCCTTTTTTAATGTTCTAAATTGTTAATTAAATTAAAATCATCTTTATTAGTATATTTTGAAATATCTAACAAAAAGTTGTGACATTATCACAACTTTTTGTTTTAATACCATATTTTTACATCACTCTCAAACATACATCTCTTGTTACTGTTTATCGTATCCAGATTAAATTTCACGTTTTTGTATTATTTTTTATGAGTACAACAAAAAAATTATATATCATACCATTACATCATTCTCAAACACTGCATTCCGTTGCTCTTTGAAATCTCCG # Right flank : CCTCAAATTCAAAAATGAAATGCCATCACCTGCATAAAATCAGATACTCAAACCATATATTTTAATAAATTTCACATTTATCTTTATCTATAATATACCGTTCCATCCCCTCCACGCAAGTTTTCTCGCTGTTTTCTATAAACAATCCTTTTATTTCCATATATTTTATTTCTTCACATAACCTCCTTATCCGTTCATCATTCAAAAAACATCTTGCATTAATAAATACAACTAATTTTACAGATAATAAATCTACAAGTACTTTTATATATTTTACAAGTCTTTCAAAAAAATCTTCTCCGCTGTCTTCACATTTTAAATCAACTGCTTTAAACAAAGCATTCATTTCAACTTCATTATTAAATTCAAGTATATAATTCGTTTCTTGTTCCAAATCTAACAAATATTCCTGTATTAATTTTGTCAGTTCAAGTGTTTTCATATATAACACTTCATTGGAAGACAACTTGTGCAATTCTTCATATAATTTATTTAAAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTGTGTACCATACATTTTTACATCATTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 145854-145422 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYXO01000002.1 Dorea longicatena strain 2789STDY5834961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 145853 36 100.0 30 .................................... GAAAGATGCGGAAGAAATGAAAATGAGCAA 145787 36 100.0 31 .................................... GCTCTGGGGCTTGCATGTCGGCAAAAAGAAC 145720 36 97.2 31 ...........A........................ AACACCCCCGATGGCAAGAGCCCTTGGACTG 145653 36 88.9 30 ...........A...T......G.C........... ACAGTGGCGGCAACAGCTACTACACCATTG 145587 36 88.9 30 ...........A.........GG.C........... CCAGGTGGTTGCGGGTAATACCTATTGGTA 145521 36 88.9 29 ...........A.......C..G.C........... TTGCTGTCCAGGGTTGAAGCGATCGCGCC 145456 35 75.0 0 ...................AT.T.CC...-.G..CT | ========== ====== ====== ====== ==================================== =============================== ================== 7 36 91.3 30 GTTCAGCAACCGTGGCAGATCAAGTGGTTCTCAAAC # Left flank : TGTTTTTGGAGGTGTTTACATATGGCAAAGACCGTTGCCGACATCGAAAGGCAGATTGCGGCGCTTCACGCCGAGAAAAAGCAGCTGGAGGCTGCGGAGAGGAAGGCCGACAAGGAGGCGCTGGAAGCCGCCGAGTCGATTCTCGGCAAGATCGTCCTGCGTGCCGTTGAAGCTGATTGGAAGCGGATCGATCCCGCACTGCTTGAGAAGTGGCTCGATGAGAGGCGCGACAAGATCCAGGAAGCGGTGCTTGGAGACGAGCTGGAGCGTGCCGATGCGCTCCGGAGGATCAAGAAGTTCAAGTAGCTTTCCGCCTCCGCCTTTATGCGTTGCGCATAGAAAAGCCCCCAGGCACCGATGGCGCTTGGGGGCTTTTGTGTTGCGATGTTAAGGCAAGGTCATCATGGCCGGGTTGCCACACGAGTTCCCAGACGGTTCAGAGCAGCTGCGTTTCGCCCGGTTTCAAAACCGAAAGCAAGATCAGGGATCGAAGATGAAGC # Right flank : GGGCATTCCTATTTCAAAGAACTGCAAAATCTGCCAGGTCTTCTTGTTTCTGCGACCCGCCCGGTCATTTTTCGATCAGGCTCTCGGATCTCCGCAAGCATATATTCCCGCCCTGACGGCGGTATGGATCCATTATAGCAATGTATTCGGGAAGAATCATCATGACTATCGCACAATCCATCAAGCAGGGCGCAGCACGCTACGCAGCATCCGCCCTCATCGCAGCCGGTCTCATCGCCGGCGGTGCAGCCGCAGTGGCAGCAAACCCTGCCGATGCTTTCGCACTGAGCCCTTCCACCGTCGCTGGTCAGATGTCCGACGGTTCCGGCAACACCGCTTCCACTGCCGTTTGGCTGCAGGCTGACACCGACAAGCTGATTGTCGCCGCCCCCACCCAGATCAACATGATCGTGCAGGCAGACGGCACGATGACCGGCCCTTCCGCTGCTGCAACCCAGATCAAGAACGGATCTGCCTTCGGCATCCACGTTTCCAAGATC # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAGCAACCGTGGCAGATCAAGTGGTTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.30,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //