Array 1 19736-21524 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOBS01000032.1 Syntrophus gentianae strain DSM 8423, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19736 29 100.0 32 ............................. CTCTTGCCAATTTTCTGGATCAACAAATCCAT 19797 29 100.0 32 ............................. GCCTGGGCTCCATTCGAGCGGGTTATTTCCCT 19858 29 100.0 32 ............................. TTTGTGAAGATCTTCGTAGTCTTTAATCTTCT 19919 29 100.0 23 ............................. NNNNNNNNNNTATTCTTCAAGTA Deletion [19971] 19971 29 100.0 32 ............................. TCAGGAGGTGTTGAACGCATTGACCTGTATCG 20032 29 100.0 32 ............................. TGCGGTGCTCTTTGCAATTCTAGTTAAAAGTG 20093 29 100.0 32 ............................. GCAGAGAAAACATATTTAGCCGTTGTAAAAGA 20154 29 100.0 32 ............................. GATAGATTGGCGGCGTTTAAATATATGGATAC 20215 29 100.0 32 ............................. TCACAGAGACAAAAACCGCCCCGGCGTCAGAA 20276 29 100.0 32 ............................. CCATGCTGGATGAAATGATCAAAAATTTGAGA 20337 29 100.0 32 ............................. AAGAAAACCCGGACGCTATCTTTGATGATTAC 20398 29 100.0 32 ............................. GAATAATGGAAACACCGTTATGGGATGCGAGC 20459 29 100.0 32 ............................. TCAAAGAGGAAATCCCCCCATACCCTGACCGT 20520 29 100.0 32 ............................. CGACATTACGGTTACACAAAATGGCGTCACAA 20581 29 100.0 32 ............................. ACTTAAACGGGTCTGCCGAGGACTGCATTTCC 20642 29 100.0 32 ............................. GAGGATTGAAAAATGGCATTTGTACCGCGTGC 20703 29 100.0 32 ............................. CGTACGTGTCGGTCTGGTATTTGCTCTCAGCG 20764 29 100.0 32 ............................. CGTACGTGTCGGTCTGGTATTTGCTCTCAGCG 20825 29 100.0 32 ............................. GCTTTGAACAAGTCGGGCAAACACCAGCTTTC 20886 29 96.6 32 ............................A GCGCTTGTTGGCACTAGGGATGGAATTGCCCC 20947 29 100.0 32 ............................. AGCAATCTTCAAACGATTCAAACCGACAAATT 21008 29 100.0 32 ............................. ACGGGCCTGAGTCTACATCAACATCATACAGT 21069 29 100.0 32 ............................. CCATTCCTGCCAGGCGGACCGAACACGGTTTA 21130 29 100.0 32 ............................. TCACCGGATCGTTTTCCGGGGTCTTGTTCGGG 21191 29 96.6 32 ..........A.................. GCGACCGCCTCGTCCAGGACGAGAAGACAAGC 21252 29 100.0 32 ............................. GTGTATTCTCCCCCTAGCAACTGTGTGTAGAA 21313 29 100.0 32 ............................. GCTTTCCAGCTCCGCCGCCGCATCGTCAAGGG 21374 29 100.0 32 ............................. CATCGGACTGGTGTAGTAAATTTAGGCGGATA 21435 29 100.0 32 ............................. TTTGGGAAAATGTTGTCCAGGATGAGGCTAAG 21496 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.7 32 ATGTTCCCCACATGCGTGGGGATGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TTTTATCTGATTAACGAGGATCAATTTCGATGTTGTCTCCTGTACGGAGGCATGGATTGAAAAAAAGCAGGCAGGGCCATTTATGACCCTGCCTGCTTCGTCCCTTTGGCTGTCGTCTCACTCGTATGTTCCCGAACAGACGATGTACTTCTTGTCGCCGTACTTGAATAGCTTTCCATAGGTATTTTTTTTGTACTTGGTCTGGTATAAGACCTCCCCCTCCGCCGATTCAATCGGCTTCTGATAACTGTATTCTGTCCAGCCGCTGCCCTTTGTCAAAGCCTTTCCGACAATTTCATCCCGAAACATTCGACCCTGATCATCGGGTTTTCCCTTCAGGCACTGTCCGATCAGTTCATGCAGATAGGGGTGAGCCACGACGACGATATTCTCGTCATAAACAAAGACATAAAGTGCTTTTTTCCTGTTGATGAATTCGCCCTTGGGGTCGCTGATTGCCGCAAGGGCAGCATCGCCCTTCTCTTCAATCAGTTTGCCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //