Array 1 33370-34492 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCSU01000003.1 Pseudoflavitalea rhizosphaerae strain KACC 18655 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 33370 47 100.0 30 ............................................... CAAAGATTACAACCTTGAAAACCTGCGCGC 33447 47 100.0 29 ............................................... TGCAACAGCATCAATATTTGCGGGCACAA 33523 47 100.0 30 ............................................... AGCTTTTAGTAATGCCAGGAGCACCGAAAC 33600 47 100.0 30 ............................................... ATGTTGGTATCCCATGTCTTTGAAGAAGAG 33677 47 100.0 30 ............................................... CGGTATCGGAAATATGTTTTGCGTGCTAAT 33754 47 100.0 30 ............................................... TCAATGCACTGGTTGGCGCAGATCCTGACT 33831 47 100.0 30 ............................................... ACCGGGTCGTATTACCGGTAATATGCGGTC 33908 47 100.0 30 ............................................... CTGCGTTACATTGCGCGTTACTTCTGTGTG 33985 47 100.0 30 ............................................... CCTCGACAGCATGCGGAACAGAATTCCAAC 34062 47 100.0 29 ............................................... GCTGTGATGTAATCATTGGTATCAACAAT 34138 47 100.0 30 ............................................... CGCACCCGGAAATGAACAGAGAAAGCAATA 34215 47 100.0 30 ............................................... GGCGCCCTTACTGGCGTGAACCGTGTAATT 34292 47 100.0 30 ............................................... TGAATTCTATCATCTCGATAAGAGGCTTGA 34369 47 100.0 30 ............................................... TCACACAACAAAAGCTGTTCGTATGAAATC 34446 47 80.9 0 ..............................CA..T..C.AG...CGG | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 98.7 30 GTTGTGTCTGACCTAAGATAAACTAAATTTTGAAAGCTTGATACAAC # Left flank : AAATAGTTTATCCTGTATTGAGTTGACATTTTATACATGGCCTCTACCAATACATCATTTGAACGACTAAATGCTTACAGGATCATGTGGGTACTGGTTTTTTTCGATCTACCAACCGAAACGAAAAAAGACAGGAAAATCTATGCCAGGTTCCGAAAGGAGATCCTGGCAGATGGTTTTCAGATGTTTCAATTCAGTATTTACCTGAGGCATTGTAGCAGCCGGGAAAACGCAGAAGTGCATATTCAAAGGGTGAAAAAAATATTACCACCGAAAGGCCATGTAGGAATTATGTGTGTAACTGATAAACAGTTTGGGATGATGGAGATATTTCAGGGAAAGGAACCTGCTAAAACACCGGATACAGCTCAGCAGCTTGAATTATTCTGACAGGATGGGAAAAATGAATTGATTGAGGTGAAAAATACCAGAAATTGCTCGAAATTATTATCGATCAAACAGGCCAGAACACACAACAGGAAAGGGTTTCAACCATTCCT # Right flank : GATTTTATCCAAAAATCATTCAAGCCCGTCGAGCCAAAGGGGTTAGCATGCTCACTATACTATCAATCTTCTTTACCCTCTCCATCAAGATTTCAACTTGCTCCATGGAAATATAATATTCCTTATACCGGCTATGAATATACGCTTGTTGAAGCAGCTTAAACAACTCCTTATCTGACTCCTCAACTCGAGGAAAAACCTGATTCAGTTCTGGGGATATCAAAGTTGAATAACGCAAGAGCTTATCAATATTATGAGTATTCGACCTCAGACCCATATTTCTAAGCAGAAACGAAATACAAGCGTGCTCGGCAGCCTGGTGAAGATTGAAAGCGCAGATCGCAAGATCTTTCCGCAACTGGAATAATTCGGCTGCAGCCAGAAAAGATGTGCTTCTCTGGAAGGCATTTCGAGATTCATCTAAATGAGTTGTGAACACCTGATCACGCAAACTCCAATCCGGCTGCGGAATAGAAGTTATTCCGGAATCATACAAAAGT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTCTGACCTAAGATAAACTAAATTTTGAAAGCTTGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //