Array 1 88118-88685 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNS010000004.1 Acinetobacter bereziniae strain ACIN00231 ACIN00231_c0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 88118 28 100.0 32 ............................ AGTACATTTTGAATATCAAAAGGGGTAGGGAG 88178 28 100.0 32 ............................ TCATCACGTGCAATCTTTTCTTGTGACCAAAC 88238 28 100.0 32 ............................ ACTTAATTTCTTTACGTATTACAGCTTCGTAC 88298 28 100.0 32 ............................ TTGATGAAAAATTATTAGTTCTTGAAGCTGAA 88358 28 100.0 32 ............................ ATTCACATCAGTTTTAATAAACTCTTGTGCAT 88418 28 100.0 32 ............................ ATCTGGATATTCAATCAATGCACAATTAATGC 88478 28 96.4 32 ...........C................ CCAAACCTCAGAAACATCAATATTTTGAAATA 88538 28 92.9 32 ........T..C................ AACCACAAATTATTCCTCGGTTTCTTTCAGTT 88598 28 96.4 32 ...........C................ TACCAATATTTGGGATGATGGTACATTTACTT 88658 28 92.9 0 ...........C.........C...... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 97.9 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : CCTGAAGAATATCTGCTTTAAGGCGTTCGTCAGCATACATACGTTTCAGACGAGCATTTTCAGCCTCTAATTCTTTAAGTCGTGTCATCATTGAAATATCCATACCTCCATATTTCGCTTTCCATTTATAAAATGTAGCGGAACTCATACCATGTTCACGGCATAAGTTAGGCACGGGTGTTCCTGATTCAGCTTGTTTTAAAATGCTTATGATTAAGCTGTCTGAATATTTAGATGTTTTCATAAAAAATCTCCTTTACAGGATTATTCGATTTTCTACTTTTGAGTTCAATTATTTTGAGGGGGGATTACCGGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCGAATATTTTAACCCAATATTTTTTTACTCTTTAGCAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTTTATCCTGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 6242-6509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNS010000020.1 Acinetobacter bereziniae strain ACIN00231 ACIN00231_c0020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6242 28 96.4 32 ...........C................ ATATGATTCGCAATCTTGGCTTCTGTTTTACT 6302 28 100.0 32 ............................ CTGTTCTATCCAGTCCGAACCATACACATTGT 6362 28 100.0 32 ............................ CTACGGTAGACAAAGCTGTCGCCCCACCTATT 6422 28 100.0 32 ............................ ATTCACGGCATCGGTTGAAGTTTCAGATACAT 6482 28 92.9 0 .....T.......G.............. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.9 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : CGAGTCTGGATATACCTACCAAGATTTTTAAAGGGTTTACGAGTATTTTCAAAGACTTGTAAGCCTTTTTTTTATGGTTAGAATTTTGTTGTTTTGACTAGATTTATCAAAAAATCATAGAAATAATTACTAGACTTCACCAAGAATGCACCAAGATGAGGATGAATGAAGTTACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAACGAAATATAAGATTTCTTCATTCTCTAATGATAAAGTAAATGAATGACATTAAAAATATGTGTGAATATTGGAAAATCTTTTACTGATAAGATAAAAGTAGTTGATTTTGAATATAGGCTTAGTTAATCAAACAAATATTCTAAAAATTTACCCCAATATTTTTTAGTTCTTTAACAACTTAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTTTTTGTTTTAAAATTACA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGGTAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACGGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCACGATCGTTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAACCTTACCAAAGCGATA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 6965-7352 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNS010000020.1 Acinetobacter bereziniae strain ACIN00231 ACIN00231_c0020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6965 28 92.9 32 A..........T................ CCTTACCAAAGCGATATAAGCCATCGCACCGA 7025 28 100.0 32 ............................ AATACAACTCGGTTTTGACTTGATCACGACTA 7085 28 100.0 32 ............................ TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 7145 28 100.0 32 ............................ ACATTCTGAGCCATCGTAGCCACATTAACGAT 7205 28 100.0 32 ............................ TGCAGAAGACTATATAGACAAAACTGTCGATA 7265 28 100.0 32 ............................ TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 7325 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 95.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TGAAGTTTCAGATACATGTTCATTACCGTAGAGGTAGCTTAGAAAAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGGTAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACGGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCACGATCGTTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGC # Right flank : ATATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //