Array 1 229694-229237 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FTMR01000009.1 Rhizobium sp. RU35A, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    229693	    29	 100.0	    32	.............................	CCGAAATATGACGAACAGCAATGGCGCGCAAA	
    229632	    29	 100.0	    32	.............................	ACCACGCCGATTTCTATCGCGCGGTCCGTGCG	
    229571	    29	  96.6	    32	.............A...............	GGATCGAGGCCTTTTGCCTTCGCTACCTCCAT	
    229510	    29	 100.0	    32	.............................	CTCGAATGGTGCCTCTTCCTCGGGCAGCCACT	
    229449	    29	 100.0	    32	.............................	GGGGCGTGCGTCGTGGGAGGCCCGATCTCGTC	
    229388	    29	  96.6	    32	.....A.......................	GCCTTGGCAACCGGCGGGCACACGCTGTTGCC	
    229327	    29	 100.0	    32	.............................	CACACGAAGGCGGCTGACGTCATGATCTGCGC	
    229266	    29	  93.1	     0	.............G..G............	|                               	T [229240]
==========	======	======	======	=============================	================================	==================
         8	    29	  98.3	    32	GGTTCCTCCGCACCTGCGGAGATAGACCC	                                	       

# Left flank :   TGGAACGGCTGACCCGACAGCGTGCTGCCAGGCTGTTTCGCCAGCGCGACGTCATTCCCACGATGATTGACCGGATCAAGCTTCTGGTGGGTCCGGACGCGCCCCGGACCGAAACGGCAAACGAGGACGAAGACTGATGCCGATGGTGGTGATCATGACCCGCGATGTGGAGGCCCGTTATCGCGGGTTTCTCGGTTCGGTCATGCTGGAACTCTCTGCCGGCGTCTATGCCCATCCCCGCATGAGCGCAGGCGTTCGAACCCGCATCTGGGATGTCATGGTGGACTGGCATGGCCAGCTGCGGCAGGGCAGCATCGTCATGACCTGGGCCGACAGCGCCGCCCATGGCGGCCTTGGCTTGTCCACGCTTGGCGAACCTCCCAAGCAGATCGTGGCGCATGATGCGATGCTGCTGGTGAGGCGGCCTCTCGCAAACGTCAACCCTTGATCGTTGACTGTTCTTTGACATTGTACAGGTTTTCAGGCACTTAGAGGCCAGA
# Right flank :  GTTTGAGAAGCTTCGATTGAAAATTGGAAACGCTCGTGATGATGCGGTGGCGGTCCTGCCTCAGGCGGGTTCGGCGGTACGCTGTTCGCCAAGGGACTGGACGAGCAGTTCCGACAGATGCCGGCGCATCAGGGTAAAGCCCTCGCTCATGCGATCGCGCGGCCGAGGCAGATCGATCGGGACTTCAGCGAGAATGCGCCCCGGGAACGGACGCATCACGACCACCCTGTCCGCCATGAAGATCGCTTCCTCGATATCGTGCGTCACCAGCACCATGGTGGAGCCGAAATCCCGCCAGAGATCCACCAGATGGGATTGCAGGTCTTCCCGGGTCATGGCGTCGAGCGCGGAGAAGGGCTCGTCCAGCAGCAGGACCGAGGGCATTGTCACGATCGCTCTTGCGAGCGCCACCCGCTGCGCCTGACCGCCGGACAATTCCTTGGTCCAGCGCCCCTCAAAACCCGAGAGCCCCAGCCTTTTGAGAACCTGTGCAACGGCCG

# Questionable array : NO	 Score: 3.17
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGTTCCTCCGCACCTGCGGAGATAGACCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-10.00,-10.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//