Array 1 214779-217449 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERWI010000017.1 Bifidobacterium longum subsp. longum strain 20B Contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 214779 36 100.0 28 .................................... GAACCTTATCGCGGGCACCACGGCCACG 214843 36 100.0 28 .................................... ACAGCGGAGATATTGCGTTGAATCAGGT 214907 36 100.0 29 .................................... ACCGTCGTTGTCGATGAATTCCCGGTTGC 214972 36 100.0 29 .................................... CGCGGAACAGCGCAAGTGCTTCATCGACT 215037 36 100.0 28 .................................... AAAACGAGTGGGACATTCTTACAAATAT 215101 36 100.0 28 .................................... CCGCTGTTGGTGACTGCTGTGAAGTAGC 215165 36 100.0 28 .................................... ATGACCTTAACCGTGTTCAGGTTGTCTT 215229 36 100.0 28 .................................... TCGTATTCGAGACATAACCATTTGAACC 215293 36 100.0 28 .................................... ATGCTATTGTGGATTGTCTTGTTGTTCT 215357 36 100.0 28 .................................... TCTACCGACGTGATGGGCAACTACAGGA 215421 36 100.0 29 .................................... ACTGGACAATGGAGATGATACAGATGATA 215486 36 100.0 29 .................................... CGGTGACGTCAAGACGAAAAACAGCAATG 215551 36 100.0 28 .................................... TTGTCACGGCCGTGGTTATCGCTATCAC 215615 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 215679 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 215743 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 215808 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 215872 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 215936 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 216000 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 216064 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 216128 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 216192 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 216256 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 216320 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 216384 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 216449 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 216513 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 216577 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 216642 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 216706 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 216770 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 216834 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 216899 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 216964 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 217029 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 217093 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 217158 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 217222 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 217286 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 217350 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 217414 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 42 36 99.7 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //