Array 1 2608662-2612526 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE124774.1 Methylocystis sp. ATCC 49242 strain Rockwell Met49242_MAH.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2608662 36 94.4 30 TG.................................. GGCTTTCCCCGCTGGAGCTTGGCGGGTCCA 2608728 36 100.0 30 .................................... TGGCGAACAGCGACAGCCACTGGAGGTAAG 2608794 36 100.0 30 .................................... AGACATGCACGAGCGCGACGGCCTATGCCA 2608860 36 97.2 30 ................T................... ACCTGCGGCAGATCGGGTGTGCGCGTTCCT 2608926 36 100.0 30 .................................... CAACCCATTGCACCATACCCGGACGGCGCA 2608992 36 100.0 30 .................................... GCCGCGGTCTCCGGACCCTTCGCGATCGCC 2609058 36 100.0 30 .................................... TGGCAGAACATGGTCAACGCCATCAACAAT 2609124 36 100.0 30 .................................... CAACGTGGTTAGGCGGTTCACCGTATGGGG 2609190 36 100.0 30 .................................... CGCATGAAGACGATGCTGACCGTCGTTGAG 2609256 36 100.0 30 .................................... TTGCTGACATCGCAGTGAGAGCGAGGCCGC 2609322 36 100.0 30 .................................... CCGACCGCGGCGCCAGCGTCCGCCGTGAGC 2609388 36 100.0 30 .................................... GCTGGAAAAGACGAGGCCCTCAAGGAACTT 2609454 36 100.0 30 .................................... CGAAGGTTCGACGGACACATCGCCGATAGC 2609520 36 100.0 30 .................................... ACATCGGCCGGACCAGAGACTCGGAAAAGA 2609586 36 100.0 30 .................................... GTTCGCCGCGCCCTTCAAAGAGGCGGCGAG 2609652 36 100.0 30 .................................... CCCCGTTCGTCGATGGCGACGGGTTCAAGT 2609718 36 100.0 30 .................................... CATGGAGCCGAAGTCGAGCACGTCGAAACT 2609784 36 100.0 30 .................................... TGCGCGCGTGGCGACGACAAGGGCAACAAG 2609850 36 100.0 30 .................................... CCGGCCGCCGTGCGCGACATTATCGCCGCT 2609916 36 100.0 30 .................................... GACGGAAGTTTCGAGGACGCGGCCAAGGAA 2609982 36 100.0 30 .................................... GCTTCGTTGTGAGACAGGTCGCCGTCTGGC 2610048 36 100.0 30 .................................... CGCAGCACCACGCCATGCAGCCGTCAACGA 2610114 36 100.0 30 .................................... CGCACTGCGGCGATATCATCGCACTTTTCA 2610180 36 100.0 30 .................................... ATCAATTTGACCGTTAGCGTCGAAGTCAGG 2610246 36 100.0 30 .................................... GACGGAAGTTTCGAGGACGCGGCCAAGGAA 2610312 36 100.0 30 .................................... GTCGGCGAAAGCACTCGCCGGTCCATGGTT 2610378 36 100.0 30 .................................... GTGCGGGGCGTGTCACCGGAGCGCGTCTTG 2610444 36 100.0 30 .................................... GTCCTTGCCGCCGGCACGATCATCGGGCTT 2610510 36 100.0 30 .................................... TCCGGTCTGGAACGGGTCGAGCATTGACTT 2610576 36 100.0 30 .................................... AGACCGGCCTTCAAGGCGACGTGCTCGAGC 2610642 36 100.0 30 .................................... TTGCAACGGCCGGATGCGTCGCGCGGGAGT 2610708 36 100.0 30 .................................... AGGCATCGGCAAGACCTCGCTCGCCGCGTC 2610774 36 100.0 30 .................................... TCCACAGCGTCGGAAAGGTTCATGACCTTT 2610840 36 100.0 30 .................................... CCAGCCGGCGCTTCATCGCGCGGACCTTTT 2610906 36 100.0 30 .................................... ACAGGCATAGAAATGGGGCGCGCAGATCAG 2610972 36 100.0 31 .................................... TCGCCGCCGACACAAAGCAGGCAATGGACAG 2611039 36 100.0 30 .................................... TTCGGCGGGCTTGGCGACCTGGCCATGCTG 2611105 36 100.0 30 .................................... CGAGCCGCTGCATGAGCCGATACCAGGTGG 2611171 36 100.0 30 .................................... TCGCGGCGGCCCACGCGGCGGCCCTCGCGG 2611237 36 100.0 30 .................................... CGGGAGCGGCGCATTTCGATCCTCGATCGT 2611303 36 100.0 30 .................................... CGCCGCGCTCGGCATGGACTGACCACTATG 2611369 36 100.0 30 .................................... ACATTCTTGTTTTTCGCGTTCTCGGCGCAC 2611435 36 100.0 30 .................................... CGCGCGAGACGCGCCTGATCGGATGACGTG 2611501 36 100.0 30 .................................... CAAGGTGTTTCGTCTCCATCATGACGAGAG 2611567 36 100.0 30 .................................... CGTCCTCCGAAAACGCCTGCGCCCGAGGCG 2611633 36 100.0 30 .................................... TCGTCGTGGGGGAGCGCTTCGGCAGTGGTG 2611699 36 100.0 30 .................................... GGCGCGATAACGGCGCCACGCGAAAACGGT 2611765 36 100.0 30 .................................... CCAGCCGGCGCTTCATCGCGCGGACCTTTT 2611831 36 100.0 30 .................................... GGGGTCGCCCTTCTCGCCGCGCTCGCCCTG 2611897 36 100.0 30 .................................... AGCATGCTCAGTCCTCCTGCAGCAGCTCCT 2611963 36 100.0 30 .................................... GGGTGAAATCATCAGGTGGGAGCCCGGCTG 2612029 36 100.0 30 .................................... CCATCGCCGCCGCCATCCGCGCCGCTGGGG 2612095 36 100.0 30 .................................... CGGACTTCGGTCAAAACGATGCAGAGACTC 2612161 36 100.0 30 .................................... ATCCGCCGCCGCCGGCTGCGCATTGGAAAC 2612227 36 100.0 30 .................................... TCGTTCTAAAAATCATATTCCTACGTTGAC 2612293 36 100.0 30 .................................... TCGCCGCCGACACGAAACAAGCGATGGACA 2612359 36 100.0 30 .................................... CGCAGCGATCGCATCTTCGTCATCCATCGT 2612425 36 100.0 30 .................................... GAGCCGAACGCGCGCACGCCCTGAACCTCT 2612491 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 59 36 99.9 30 GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT # Left flank : CCAAACCTATGAAGACCAGACCGATCGCATTCGCCACCTCAACGACGCCTTCAGGCGCCAAGGGAGCGTTGCTGGCAAATTCATGATGACCGCAGGCGTCGCCAGCCTGCCTTTGGGCGACCAAGCTGCGATCATGCGCAAGGTGATGAGCTTCAATGCCTTCACGCCCGAGAATGACCCGTACGGCGAGCACGATTTTGGGGCGTTCGAGCACAACCGTCGAAACCTCTTCTGGAAAATCGACTACTATTCGCTCGACATGGTGGGCGGCTCGGAGAATCCCGCCGACCCTGCGCAGACCGTTCGTGTCCTCACCATCATGTTTGCGGACGAATATTGATCTGCGCGATGGACAGCTCCTCACAGGGGCTGCCTGTTGGTTCGGCGTAGAGGCATGAGGCGGCGTCGAGCGCGTGAAGGAGCGGTTTGGCGTGACCGCCGCATGGGATGACGACTTTCTCGCAAGCCTGATCGCCGCTTAATCCTTCACCCGATTCCCC # Right flank : TAGCTCGCGCACAAGCACCTGAAATGCGGATGATTTTCGCCTCTTGCCGGGACGGAAATCACAGCAGGACGAGTTGTTGCGGCGCGGCTTTTTCATTTTTTGTCGATTCGCCGATCAGGAGCTTCATGCGGGCGTATTGGCGCTCGGTGACGCTCAAAGTACGCACGCTCCCCTTGGGCGGAAGGTTCTTCGTGACCCTGGCGAGGTGCTTTTCCACAGCTTCTTCGCCGCGCATGACACGTGCATAAACGGAAAGCTGCAGCATCAGGAAGCCGTCGTCCTTCAGGAAATTGCGAAACCGCGTGGCGTTGCGCCGCTCGACTTTCGTGCCGACCGGCAGATCGAAGAAAACGAAGAGCCACATATATCGGACCTCCCCGGTTTTCATGGCGGCAACCCCTTTTTCGCCAAGAAGGCGGGCAGGCGGAGCAACGCCGCACTCGATCCTTCCATCGCCCGAACGAGACTCTCCGCCGCCTTTTCGCTCGCGACAAGCAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //