Array 1 414074-415756 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR594040.1 Streptococcus australis strain NCTC5338 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 414074 28 100.0 33 ............................ TGGACTGAGGGAGCTAGTGGGGTTCTAAACGTT 414135 28 100.0 33 ............................ TGTCCCGAAGACACCGAAGACAATACGCTCTAT 414196 28 100.0 34 ............................ TACAAGGCGACTAGCCCGTAACATTGCCCGTTAC 414258 28 100.0 33 ............................ TACATTGCAAAGATCCCACGCGCCAAGATAGCC 414319 28 100.0 33 ............................ TATCAAACATCTGGACAGGCACATCACTCTGGC 414380 28 100.0 33 ............................ TAGGCGAGAATTGGCAAAGCTAGTGCAAATGCC 414441 28 100.0 33 ............................ CCCCTACCAGATGTTTCTGACATAGAAATTTCA 414502 28 100.0 34 ............................ TTGAGCAACTTATCAATGGGCAAAGTAGTATTTA 414564 28 100.0 33 ............................ TGGATTGGCTGAACCACTTACATAAAAGTGGGG 414625 28 100.0 33 ............................ CAAAAGGACAAAGATGGTAACGTTGAATTTAAA 414686 28 100.0 33 ............................ TAAGAAACGTGGTGCTGGTTGGCTTTTCAGAAC 414747 28 100.0 34 ............................ CAATCGTAGATTTTATATCAGCACATGCTAATTG 414809 28 100.0 33 ............................ TAAAACCTACGACATCATACCAGTCATGCGACA 414870 28 100.0 33 ............................ TAATCATTTCATCAAATGTTACCATACCCCGAA 414931 28 100.0 33 ............................ TACAGCATCAAACACAAAAGCGTAGTACGTTCG 414992 28 100.0 33 ............................ CAAATCATGGTTCTACTTCGACAGTCGTGGATA 415053 28 100.0 33 ............................ TGATCCGACTGAGGGCTTTGTAGTCGCTCGTAA 415114 28 85.7 33 .C...........ATA............ CGCTGGTGCAAGTAGTTGGCTTGCTCAGGAAGC 415175 28 96.4 33 .............A.............. TAAGGTTTTCGTTGAGGAGCATAAGATGTACCG 415236 28 92.9 33 .............AT............. CAGAATCTATAATATGTAGTTACAATTTGAGTT 415297 28 89.3 33 ............GAA............. CACACCTTTAGGTTGCAAGTTCAATTCCTTCAA 415358 28 89.3 33 ............GAA............. CTTGATTCAAAATAAACAATAAAAAAGGAGAAT 415419 27 85.7 33 ............TAT......-...... TCACTGTTGCTGGCACTAAAATTGATGAAACAA 415479 28 85.7 33 ............GAA.........C... TACCATGTTTCACGATTTTTAACCCAGCCTTTA 415540 28 82.1 33 ............GA..T...AT...... CATTCGCTTCTGACCGTTGAAATAGAAACCTTG 415601 28 92.9 34 ............TA.............. TACAGAGTACAGAGTTTCTGCCTCAGTCGTGTTG 415663 28 96.4 35 .............A.............. CGGGAGCATGCTTACCCATGCTTATGGCAAGGTGA 415726 28 92.9 0 .............A............A. | AT,C [415748,415753] ========== ====== ====== ====== ============================ =================================== ================== 28 28 96.0 33 GTTTTTCCCGCACTCGCGGGGGTGATCC # Left flank : GAGAATGAACATACCATTATAGAAATTGGGGCACTTAAGGTTACTCCATCCACTACAGAAGAGTTTAATGCTCTTATCAAACATGACGGAATCTTGCCTACGAAGATTTCTAAATTAACGGGAATTTCTCAGGCTCTATTAGAACAAAATGGTCGAAATTTAAAAGAAGTACTTTCCGATTTTTTGCTTTTTATAGGTGAATCAGCTTTAGTTGGCTATGGTATCAATTTTGATGTTAAGTTTATTAACAATGAGCTTAACAAGTTGGGCTTGCCTTTATTATCAAATAAAACTCATGATTTAAAGAAATTTGTCAAGAGTGAAAAACTATTTCTGGCTAACTATCAATTACAGACAGCTCTTAAGGAATATGGAATTGAAGAGGTAGTTCCTCATAGAGCTTTACCGGACGCTAAGTTAATCTATCAGTTATCAACAAAAGTGAATAAATTTTTGGATAGAATCAATCGGGATTAGCGATTTCAATGGGATCTTTTAGT # Right flank : CATAAAATGAGATATAAGAAAATATCCCTATTGAAAACTGGTAAATTAGAGATAGGAGTGTTTTTTATAGGAAAAAAGCATATTTTGTGTCAATGAAGATATCTTACATAACAAAGGAAAAGACAAGTAAATCGAATGAAGTCATCATGGAGACATTTGGTAACAATAACATCAGTTGGGTAAAAAACTTGTAGCAGAGTATAAGAAAATTTGTCTTGCATCTGTTGTCTTAGAGAGTTTCAGAACTAAATGCTCAACATTTTTTGATTGGAAAAACGAGACTAAAATCCTTAGCTCAAATTATCGTTTCTATCGAACTGGCACAAAACTTTGCGGCCCTCAAAGCCTTGGTGAGTACGGGCATCCAGCAAGGCCACATGAAGTTGCAGGCCAAATCCTTAGCTCTCCTAGCTGGTGCTAGTGAATCTGAAGTTGCTCCCCTCGTTGAGCGCCTTATCGCAGAGAAAACCTTTAACTTAGAGACAGCCCAGCGCTATCTA # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACTCGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //