Array 1 37203-35717 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXGA01000021.1 Clostridium sporogenes strain IFR 18/061 contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 37202 29 100.0 39 ............................. TTTTTTAAATTACCTGTTTCTTCTCCTATTCCTTTAGAG 37134 29 100.0 38 ............................. CTCGAATTGCAAAGTTCTATAATGTAAGGGTCTTGTCT 37067 29 100.0 36 ............................. ATAAAGGTGTAAAATTTAACTCGATTAATAAGCTAG 37002 29 100.0 37 ............................. TCATTTGAACTCGTTTTTATTATATGTTCTAACATTG 36936 29 100.0 40 ............................. TATTGTTACTAAATACAAAGAGGGTTTATATGGCTAAAGG 36867 29 100.0 38 ............................. TTGGGCTAAATATTCTACTAATCCGCCTGTTTCGTCGC 36800 29 100.0 38 ............................. AAACTTCTTCTTTTAGCATTATCTTCTGTTTTATTCCC 36733 29 100.0 38 ............................. TACACATGCATTTTCTACACATGATATATCCTTCATCG 36666 29 100.0 37 ............................. ATCTCTTAACATTTCCACTTCTGCATCAGTACATTTT 36600 29 100.0 37 ............................. TTTTAATAACTAATTTCTCTAAAAATAAAATAAGAAG 36534 29 100.0 36 ............................. CTAACATAGTTATATTTTGGGCTTTCAGCATCTTTA 36469 29 100.0 38 ............................. CTTTTTAACAATTTCTTATTATGTTTATTAATTTCTTG 36402 29 100.0 37 ............................. AATCTATAGTAATCATATCCCTTTAAACCTCCGTTAT 36336 29 100.0 38 ............................. AATATATCTTTCTATTATTTTTACTTTCGATTCTCTAG 36269 29 100.0 37 ............................. CAAGTTTTCATTTCCAATTCTGTCATGGTTTTTGCCT 36203 29 96.6 37 A............................ TTTTAAACTTCAAATATATCTTTTATTTCATACTCAC 36137 29 93.1 36 ................G...........A TTACAAGAATTTTTATTTGTTGTAAAATTAAAATAA 36072 29 89.7 38 .........C.....C........A.... TTACTTAATTTAGGTTTTATGTTGACCTTACCGGATTT 36005 29 89.7 33 ............T........C....T.. ATTAAACATCAACCAATTTTGAGCTTGCACTGT GA [35980] 35941 29 96.6 36 ........................A.... AAATTTTCTATGTTCACTATTTTCCCAGCATGTTCA 35876 29 93.1 36 .......................C..G.. ATTACATATGTAGCAAATGCTACAGCAACAAAGATT 35811 29 89.7 37 ...............C........AG... GCGCTTGCAGCTCTAAGTAAACATTTCTAAGTCTTAC 35745 29 86.2 0 A.............G.........T..G. | ========== ====== ====== ====== ============================= ======================================== ================== 23 29 97.2 37 GTTTTATAGTTCCTATAAGGAAGTGAAAT # Left flank : TAAAGAGTTTTTAATCAGTATAAAGAATAATATAATAGCAAAATACAATTCATTTTATAATGAAGAATATAAAGGAATTTTAAATATAAGTATATTAGATGCAAACAATATAAGAAAGAAAATAGATAAATATAAGAAGTGGATATATGAAGGATATTTAGGTGGTTTTATAATAGAGGGAGATACTGAGATAGTAGAACTTGCTTATAGCTGTGGATTAGGTAGCAAAAATTCTCAAGGCTTTGGATGTATTGAGACATTTAAAGATCTTAATGGTATTAAAAATTATAGCAGAATAGTTTAAATTTAAATATTTTGCAGCGAGCTAACTTTTTTATTATATGTATATAAAGTATTGATTTAACTGAATTTTTTAAAGATTAAGTGGGTTTTATAAAAACATTACTGAAGGTTTACTGCAAAATCCATAGATTTAGGTGATTCTTAACATTGTTAAAAACAAGATGTAGCCTTATTTTATGGTAATTTTGAAATTGGGG # Right flank : AATTTTAATAATATTTAATTATTTGTATTATTTTTTATTGGGGGGAAATTTTTAATCTAACATAGTTTAAAATTTACTATAACAAATAAATACTATTAAATCCTTTATAAGTAAGTTTAAAAAGAATTGTTATTTGGTATAATGTATATAAGCGTAATTACTAATTAGTAACCTTAATTGATAATTAAGTATTGAGAATTAAACATATGTTAAGGAGGTGATAATATGGAGTTTGATATTTATACATTAGTAGAAAATGATGAAATAGAGTGTAAAGAGGCTTTAGGTGGATTACCTAAAGATTTATGGGAGACTTATTCAGCTTTCGCCAATTCTAATGGAGGAACACTTTTTTTAGGAATAAAAGAAAAGTCAGCGAAATTCTTTTTTACAGGAGTTAAGGATGAAGAGAACATAATTAAAGATTTATGGGACAATTTAAATAATCCTAAAAAGGTAAGTGCAAACATATTAGGTAATAATTCAATAGAGATTCTTAC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATAGTTCCTATAAGGAAGTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.00,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 23378-18031 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXGA01000006.1 Clostridium sporogenes strain IFR 18/061 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 23377 30 100.0 36 .............................. ATTTTTCATATGAGCATTTACGACTACAGCACTTCT 23311 30 100.0 37 .............................. CAATATATTGCCAACACTGTAACGTCTATATTTGAAA 23244 30 100.0 36 .............................. TTAAATATGTAATTAAAGTATCATATATATTATTCA 23178 30 100.0 37 .............................. CTGATTTTTGATTTATAACGTCATATATAAAACTTCT 23111 30 100.0 36 .............................. GATGGTACGAAAGTGCGTTATATAGACGATACAAAT 23045 30 100.0 37 .............................. TAAAATATTCTTGTCCGCTAACACCACCAACAAGTTC 22978 30 100.0 35 .............................. AAGAACACAAAATCCACGTTAGGGAACGAAGCACT 22913 30 100.0 35 .............................. TTACTTATCTGTACCATTGCTAATCCTCCCTTATA 22848 30 100.0 37 .............................. TATCCAAGTCTTTTGCCCTTTAACTCCCAAGTGAATT 22781 30 100.0 36 .............................. TTTTTAACACGTTCCATATTAATTCCTCCTTATTAA 22715 30 100.0 36 .............................. TTTTATAACCTTCTTTCCTCAGAATAATTTCATATT 22649 30 100.0 37 .............................. ATCATTAAATTCCATATACCATCTATGAAGTATATGT 22582 30 100.0 37 .............................. GATTTTGTGAGCTTAAAGGAGTAAATCCATCAACCCG 22515 30 100.0 36 .............................. ATTGCTGAATTACCTCTCCAGTCGTTAGTTATGAAA 22449 30 100.0 34 .............................. TCTATAATTAACAGTGAAGCTCCAAATCCTGTAG 22385 30 100.0 35 .............................. TTTTTAACACGTTCCATATTAATTCCTCCTTATTA 22320 30 100.0 34 .............................. CACCCTTTCTGTAAATAAAAAAAGACACATAGAA 22256 30 100.0 36 .............................. GAATTTGAAGTTAAAAAAGATGAAGAAGTAAGAGAA 22190 30 100.0 36 .............................. GAACGATACAATAGTATTAAAGTAGTAAATGATTAT 22124 30 100.0 36 .............................. GGGTAATATAGGCGTAACATCAAGTGGTTCTTTGCT 22058 30 100.0 36 .............................. TTTTCCTTTGGGAACTTATTTACTCGACAAAGGTGT 21992 30 100.0 36 .............................. TGTATTATAACAAGATAAATGAGGTAGTTAACAACG 21926 30 100.0 36 .............................. ACGATGTATTTAAAGATGTAGACACTACCTCAATAA 21860 30 100.0 35 .............................. TATCTCAATTGATTTGCTTCATTAAGGAATGTATT 21795 30 100.0 36 .............................. CATTGAATTAAAGAGTTATAAGCCTTAAAGTATTCT 21729 30 100.0 35 .............................. TAACTCTATCCATGTTGTAAATTGTGTGCATTATA 21664 30 100.0 36 .............................. ACGGACTTAACTTCACCCTCGTAATCATTATCTGTT 21598 30 100.0 36 .............................. AAAGTAAATTTCCATTGGCTATTAAAAAAATAATTG 21532 30 100.0 35 .............................. ATATTTTTAACGAATTTAGAATATATTTTCCTATT 21467 30 100.0 36 .............................. TTTAATACTTTGCTTAATTGTTTATATCCTATCTTT 21401 30 100.0 36 .............................. TATACATTCATTACTCTTCCACCTTCACATTTATAT 21335 30 100.0 35 .............................. CTATGTATGGAAAAGATGATTATAATTGGTTCGAC 21270 30 100.0 36 .............................. CCCCTTTCTCTAATTATAATTATACACTAACCTAGA 21204 30 100.0 34 .............................. GTTTAAAAAAGGTTTGTCAAAAGTTTGGCTTAAA 21140 30 100.0 35 .............................. GATGTTAAATGAATTGGGATCACTTTTTTATGTGA 21075 30 100.0 37 .............................. GGATATAAACATTGCAAAAATTGACATGTTAAACCCT 21008 30 100.0 34 .............................. TGCCTTTTTTAATAGCATTTACAGTACCATCATC 20944 30 100.0 36 .............................. CGTAAAATATTTAGTCAATAGTTTTCAGATAAATTT 20878 30 100.0 36 .............................. CATAAATTTCTTATATGATTTTCTAAAAAACTATAA 20812 30 100.0 34 .............................. TCTATTGCAAATAACCCGTTTAAGGCATATTTAC 20748 30 100.0 36 .............................. ATATCCTCTTTAGACTTTGGTTTTGGTGTACTTTTA 20682 30 100.0 35 .............................. CCTAACAACTTAATTAAAGATTTATGCTTTCTATT 20617 30 100.0 34 .............................. ATATAAATAAAACCCTAAAGGATTATCCTTTAGG 20553 30 100.0 35 .............................. AAAAACTATTGATGGTAGTTATCGCATGGTTTTAT 20488 30 100.0 34 .............................. GTTATTTGTCTTACAAAACTTGGTATACCATCAC 20424 30 100.0 35 .............................. ACCTTTAGATTATTACCTCAATTTGGATTCTTTAG 20359 30 100.0 36 .............................. TTTTGGCAGGTTTAGGACAAGGCACAGGAGATAAGA 20293 30 100.0 40 .............................. CAACAGAAGAAAGATTTCTTTATTTTCGACAACCAAATAG 20223 30 100.0 36 .............................. CCGATTCGCATTCCTGTCCAGAATAAGATATTAAAA 20157 30 100.0 34 .............................. AACCCCTTTGTAGTCTTATTTACAAAATTCACCG 20093 30 100.0 36 .............................. AGGTTACGTGCCTTACGCGAAGACAATGACCTAACT 20027 30 100.0 36 .............................. CTTATTTTTTGTGCTAATTGTATAGTTCCATCAATT 19961 30 100.0 37 .............................. CTCTATGCAATTGTTCTATTAAATCGTTAGCTTCTTC 19894 30 100.0 36 .............................. AGGTTTTAGGTGGGTTTATTATATCCTTTTTATTTA 19828 30 100.0 34 .............................. GAAGTGGTGAATTATTAGCCTTAACATATAAAGA 19764 30 100.0 35 .............................. GTATGTTAATAACAAGATAATAGAAGCATATAAAA 19699 30 100.0 35 .............................. AGGTTTGCCCCATCATTCGCCAACACTCTTAAATA 19634 30 100.0 36 .............................. TATGCTAACCTCTAATAAGAGGGGGTGTTCGATATG 19568 30 100.0 36 .............................. GATATTATAATTTATCTAGCAACCCAGTGGTTAAAG 19502 30 100.0 34 .............................. TAAAAAATATACTTTAAGAATAGAAATTCTTTTA 19438 30 100.0 36 .............................. AAACTTAACAACTCCAAGGTATATACGTACTTTTAC 19372 30 100.0 36 .............................. GTGTCAACTTTCTTTTTCTTTAACTCTGTATCTTTC 19306 30 100.0 36 .............................. TTATTTCTAACATCATCATTTCCTCCTTTTGAGTTT 19240 30 100.0 35 .............................. TTTGAATGCGTTAGCTAGTCCATGGGAACGTTGGG 19175 30 100.0 35 .............................. TAGGTTGTGAAGGTAGTTTTGTATTAAATAAAGTT 19110 30 100.0 36 .............................. AAGAGATTGTAATCTTGTTGCAGATAGTATAGTAGG 19044 30 100.0 37 .............................. TTGGTAGATAATTGGGACAAAGTAATTGTTCATGAAA 18977 30 100.0 36 .............................. TCTATTAAAAATATTCTTTCTTCGACTTTTGATTTC 18911 30 100.0 36 .............................. TTAAAATCATCCTTTTCAATTAACATACTTTTATTA 18845 30 100.0 34 .............................. ACTATAACAATAGATGGAATTACATATAATATAG 18781 30 100.0 36 .............................. TAAGGTTATGCAACAAGTAATTTGCAGAACAGATAA 18715 30 100.0 35 .............................. TGCCAGTGAGTTCTAAGCCCCTTAAAATTTAATAA 18650 30 100.0 34 .............................. CCAGAATATTTCATAGTATCATATATTAATACCT 18586 30 100.0 36 .............................. GTGGTACACTAGGGGCAATCATGAAAAGTTCTGGTG 18520 30 100.0 36 .............................. GATAGTAGGTACAGGAATTGAGAATAGTTATGAAAT 18454 30 100.0 34 .............................. AATTAAGATCGATGCAGTACAATGTTATGATTAT 18390 30 100.0 36 .............................. AGAAATGCATAATTTATTTATTGAAACTAATAATTT 18324 30 100.0 36 .............................. CTGTATATATCTTCTGGAATACTCAAAGTAATATTT 18258 30 100.0 36 .............................. ATGTAAAGAATTAAGTAAAAAGTTTGATGAAGTCAT 18192 30 100.0 34 .............................. AAAAGAGAATGTAACTAATGTTGAAACCTGGGAA 18128 30 100.0 38 .............................. TGTGTTTAGTAGAGAAAGTGATTTGAAAGAGCAAACAG 18060 30 86.7 0 A.......T.......G............C | ========== ====== ====== ====== ============================== ======================================== ================== 82 30 99.8 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : ACTGTTGCTCGTTTTCAACAATTGAACATTAACATGAGATGTATTTAAATGATTTTGTGAGCTTAAAGGAGTAAATCCATCAACCATTGAACATTAACATGAGATGTATTTAAATAGCTTTCCATGTTTCTTTCCCTACAATACCATCTGCATTGAACATTAACATGAGATGTATTTAAATGAAAATCCTAGTTGAACCTTTGCAATGTAAAAAAGCATTGAACATTAACATGAGATGTATTTAAGCAGAGAACTCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATG # Right flank : AAATTAAAATCCGTGATTTTTTCCTTTAAAGTTGTTTAGCTTTTAGAGTAGCGTTGATAATATATCAATTTTTAAGAGAAGTCATTTCTGACTTCTCTTAAGTGGTATTTATTTAATTCTATAAAGTATATTAATCAAAACTTATTTTTTTAAATGTACCTTTTTCTATATGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACAATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACGGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTTCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATATACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 24119-23631 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXGA01000006.1 Clostridium sporogenes strain IFR 18/061 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 24118 30 100.0 36 .............................. GCCTGTACTATGTGAAAAGTTTTTTCTTTTTCAATA 24052 30 100.0 34 .............................. TTTTAAACCTCCTACCACATAACTTTTTTTATTT 23988 30 100.0 35 .............................. GTAAATCTAACACTCTCTTTTGCTTTTTTGTCTCA 23923 30 100.0 36 .............................. TGAGATAGGGCAAGAAACTGTTGCTCGTTTTCAACA 23857 30 100.0 35 .............................. GATTTTGTGAGCTTAAAGGAGTAAATCCATCAACC 23792 30 100.0 36 .............................. AGCTTTCCATGTTTCTTTCCCTACAATACCATCTGC 23726 30 100.0 36 .............................. GAAAATCCTAGTTGAACCTTTGCAATGTAAAAAAGC 23660 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 99.2 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAGGAGAAGATGTAGATGGGGAAAGGATTTAATTATAATTATGCCTTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAACAGAGTATTTAAAGTTTGCAAAAAATATTTATCTCATTTCCAAAAATCTGTATTTAGAGGAGAAATAACACCAGCGAACTTAATATTATTGAAAAGGGATTTAAATAGAGAAATAGATGAATGTGAAGATTTTGTATGTATTATAAAGTTAATGAATAACAATGTTTATGGAGAAGAAATATTAGGAAATAAAGGAATAACAACAGGGGAAGATCTAATATTATAGAAAAAATAAAATTGATTTTTCCAGCCAGTTTAAATTTTAAAATCTATCTTAATATTTGCAACATAAGGCTTAAGATAGGTTTTTGTTATGTTTTTATAAAAAAATAAGAACCAGCTGGAAAAATTTCTTTAGAACTTTGTAAAATCAATGGTTGTGTGATATTCTTAAAATAAGGAATAGCTATTTTACTATG # Right flank : AGAGAACTCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAATATTTTTCATATGAGCATTTACGACTACAGCACTTCTGTTGAACAGTAACATAAGATGTATTTAAATCAATATATTGCCAACACTGTAACGTCTATATTTGAAAGTTGAACAGTAACATAAGATGTATTTAAATTTAAATATGTAATTAAAGTATCATATATATTATTCAGTTGAACAGTAACATAAGATGTATTTAAATCTGATTTTTGATTTATAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 35108-33689 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXGA01000006.1 Clostridium sporogenes strain IFR 18/061 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================================================= ================== 35107 30 100.0 36 .............................. TATTTGGTGCGTTCTTCATAGCCACTCCAGTTATCA 35041 30 100.0 35 .............................. CAACATGAGAGACGTGTTAAGTAATATGTAAGGAG 34976 30 100.0 36 .............................. TAACCAGTAAAAAGGCTATCTTCACAATTTTGTAAA 34910 30 100.0 35 .............................. GAATGTAGAGCATTAATTAAATGCAAAAAGAATTA 34845 30 100.0 37 .............................. ACGTTTGCTGGGGTGTGTTAATATCTAATTGTTCAAG 34778 30 100.0 34 .............................. TAAGCATACTTTTCGATACTATCTATTTAGTTGT 34714 30 100.0 36 .............................. GTTATTGGTGTGTGATTTAACTCCGCAACTGCGGAA 34648 30 100.0 34 .............................. ACTAATGGCTCTATATTAAGCAGTATTTTATTGT 34584 30 100.0 35 .............................. AAGCATCTGTGAATACATTTCCTGCGCCCGCAGCT 34519 30 100.0 36 .............................. TTAAATATTTTATAAGTATACTTTGCTTTTATATTA 34453 30 100.0 35 .............................. TAAGTTATCTTTATTAACTGTTTAACTAAGAGTCT 34388 30 100.0 35 .............................. TAATTAACTGTCTTATCTGGCGTATATGTGTTACC 34323 30 100.0 35 .............................. TCAACTGTATAAAACATTTTAAACACTCCATTCTT 34258 30 100.0 34 .............................. AATATATTTCTAATTGTTCAGCCATTTAATCCCT 34194 30 100.0 36 .............................. GAATACCGTTATTGGTGGCGACTGCAATTCCTTCAT 34128 30 100.0 35 .............................. ATGTAAAAATACCTTAGAACCATTAAGAGAATTAA 34063 30 100.0 35 .............................. GTATTAGAGCATAGAGCAAATAACCCTTCATGGGC 33998 30 100.0 35 .............................. TTTGTTTCTTCTGCTAAATCCATAAGCTCTTTTAT 33933 30 96.7 36 ....................A......... TTTTTAGCCTTAGCTTGTAATTCCTCATCTATCTCG 33867 30 80.0 119 ...A....A......GA......C....G. AGAGAACTCAACTCTATAATGTGTTATTAATCATGTACTCTTTATAGATTATAGAAAAAATGTCTATAAATTAATAAATAATTTAATATATTGATGAATTATGATTAATATGGTAGACT 33718 30 73.3 0 TA.ATTT.A.......A............. | ========== ====== ====== ====== ============================== ======================================================================================================================= ================== 21 30 97.6 40 ATTGAACATTAACATAGGATGTATTTAAAT # Left flank : CAGTAACATAAGATGTATTTAAGTTTAAAAGACCTCCTTTCTAATCGACACTACCACCTATGTTGAACAGTAACATAAGATGTATTTAAGTGTAGGTAAATCTTTTATAGCTGTTGCACTTAATCTAGTTGAACAGTAACATAAGATGTATTTAAGCCTATTCTTATGCAAAATCCATTTTTTTCTTTATGTTGAACAGTAACATAAGATGTATTTAAGCATGGAACCCAAATCTCTGATTTCACGTGAGTCGCTTACTCCTCCGAGAATAGGAGAAGGAGTTTCATTAATAAGCATAGCGCATATCTTATATTTAATTAAATTTTTCCAAGTGAATTCAATTTTAAAACCTATTCTAGGTATTGAAATGTAAGGCTTAGAATAGGTTTTTATTATGTATTTTAAAAAAAGCAAAATCACTTGGGAAAACTTCTACAAAACTTTGTAAAATCAATGGGTATGTGCTATTTTTTTAAATGAGGAATGGCTATTTTACTATG # Right flank : ATTCTTGTATTTATTATTTAATTTTAACCATAACATAAGATGTTTAAGAGCTATGTAAAAATTATTTTTTATGTGGCTTTTTTTATTATGATTTTATAAATTATTTTTATATATTAAAAAACGTTAAATATACTTATATAATTAAATTTTTTACATTAAATTCGTGTAAAACATTGACAAAAAAAACTATAAATGGTATTGTATGATTATACAAAGAATTTTTATGAAATATGTTTTCTAATCATGTTAAAATTTCAATTCTAGTATTTATTATTTAAAAAAGGTGTAAATATGAGAGGAATAATAACAAAATTTATTCAAGACAATAAGATCTTTGTACTTATAGTAGCATTATTAATTTTTTCTATTTTTAACAAGAACAAAAATATAACTTTATTAAAGGGGGATAAAAAATCATTTTTCTATTTTTCTATGTCCAATAACAGTGAAAACATATAAAAGTAGAAACCTTTTATATGTTTTAAAAAATAAGATATATG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.36, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 36070-35389 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXGA01000006.1 Clostridium sporogenes strain IFR 18/061 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 36069 29 100.0 36 ............................. ATTGCAAAGAAATTGAGAAAAAAGTATTGACACATG 36004 29 100.0 36 ............................. ACAAGAATTTATTTATGAAAATGAAGATTTAAAGGA 35939 29 100.0 36 ............................. ACCAGTTACGTGTAGGTTGCCACCAACTTGAGCGTG 35874 29 100.0 37 ............................. ATAACGATATTCTTATAGTTGAAGATGATCCTTGGAA 35808 29 100.0 36 ............................. AAACATTGTGACTTCACTCTATGCAATTGTTCTATG 35743 29 100.0 35 ............................. TAATTGAACGTTTAATATTGTTTTTTCTTGTGTAG 35679 29 100.0 37 ............................. TGCTTTAAATAGAACTTTAAGATATACATTTACTCAT 35613 29 100.0 38 ............................. TTTAAAAGACCTCCTTTCTAATCGACACTACCACCTAT 35546 29 100.0 37 ............................. TGTAGGTAAATCTTTTATAGCTGTTGCACTTAATCTA 35480 29 100.0 34 ............................. CCTATTCTTATGCAAAATCCATTTTTTTCTTTAT 35417 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 11 29 100.0 36 GTTGAACAGTAACATAAGATGTATTTAAG # Left flank : AAAAGCCTACATTCACGTATTTACTTTGTTTTTTGTAGTAAATATTTATGATATGATTGTTCTAGATATAGGTCTTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAAGATATGGATAAAGAATATAGAAATCCATGGCATCATATAAAAGGAGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGGTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTCAGATTTGGTGCGAGTCGCTTACTACTTCGAGAATTGGAGAAGTAGTTTCATAAATTAAATTTTCCAACCACAATAAATTTAAAAAACTATTCTAGCTATTGATATATAAGGCTTAGGATAGGTTTTTATTTTGTATTTATAAAAAAACAAAATCACTTGGAAAAATTTCTTTTAAACCTTGTAAAATCAATAGTTATATGCTATTCTTAAAATTAAGAAATGGCTATTTTACTATGG # Right flank : CATGGAACCCAAATCTCTGATTTCACGTGAGTCGCTTACTCCTCCGAGAATAGGAGAAGGAGTTTCATTAATAAGCATAGCGCATATCTTATATTTAATTAAATTTTTCCAAGTGAATTCAATTTTAAAACCTATTCTAGGTATTGAAATGTAAGGCTTAGAATAGGTTTTTATTATGTATTTTAAAAAAAGCAAAATCACTTGGGAAAACTTCTACAAAACTTTGTAAAATCAATGGGTATGTGCTATTTTTTTAAATGAGGAATGGCTATTTTACTATGATTGAACATTAACATAGGATGTATTTAAATTATTTGGTGCGTTCTTCATAGCCACTCCAGTTATCAATTGAACATTAACATAGGATGTATTTAAATCAACATGAGAGACGTGTTAAGTAATATGTAAGGAGATTGAACATTAACATAGGATGTATTTAAATTAACCAGTAAAAAGGCTATCTTCACAATTTTGTAAAATTGAACATTAACATAGGATGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //