Array 1 19382-18825 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVQY01000016.1 Bacillus sp. GBSC66 NODE_16_length_37150_cov_55.1626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 19381 32 100.0 34 ................................ TTGTCCATGTACGCTTTTTCTATTTGTTCAGGTT 19315 32 100.0 33 ................................ ACAAAGAATCAACCCTTGGGGTGTCAAAGTCAC 19250 32 100.0 35 ................................ CATAGACAACTCTATCCAAAGTTACGAGTGAAACC 19183 32 100.0 34 ................................ ATAGAGCCTTTATTTACAACAGCGTCATCAATGG 19117 32 96.9 33 .................C.............. CTGTTCAGACATAGCTTTTGATAATTTCATTAT 19052 32 100.0 33 ................................ ATGTATTCAATTGACTGGTGCTCAATGTTTGAA 18987 32 84.4 32 .............A.....TA........GG. AGCTTGAAAGAAATGCCACCCATTGGTTGGGT 18923 32 93.8 34 ...........T...G................ TGAAAAGCCTTATAGATCGTTGTTTTGTTTTCTA 18857 32 90.6 0 ...................GA......A.... | T [18828] ========== ====== ====== ====== ================================ =================================== ================== 9 32 96.2 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACAGTAAAGGAAGCATTCAAAGTAGATGTGATGACACCACATCATTCAAACTACAACAGTGTCAAGCTAGATAAGATGAACAAAGAGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCGACCAGAAGAATCAGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGAGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATGGACGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTAGAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTCAGGGGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGGTCATTCCCTAAAAAATGTTATAATTAGAGCGGAAATCGCA # Right flank : TGAGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGATGAAATATAAAGAAGTATGATGAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGAAATATTCGCACCGTTTCATTCAATAAAATGAGAAAAAATGTATATTATTTAGAGGGGAAAACAAAATTCTATATAGAAACTTGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATAATGGAATTGCGTAGTAAACGATATCTAAATTCGAGTCGCACTCTATATGAGTGCGTGGATTGAAATTTTGCCCCACTCATTCTGTCATAGTAAAGTTTATGTCGCACTCTATATGAGTGTGTGGATTGAAATTTGCATTTTCTTGGAGTCTCTCTGTCTCTTCGCGTCGCACTCTACAT # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 28187-27891 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVQY01000016.1 Bacillus sp. GBSC66 NODE_16_length_37150_cov_55.1626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 28186 32 100.0 33 ................................ AGCAAACTATCGAAGTGTACAAGTGTTCCCATG 28121 32 100.0 34 ................................ CCGTTCCTCTGCCGTCTCCTGCGTGCCAACCGTT 28055 32 96.9 35 .............A.................. AATGTTTTTATGAGCTTTAGCTATAAGTTTGTTAC 27988 32 96.9 34 .............A.................. ATCTGCTTCCATACCAATCCACCGAGATACTAAC 27922 32 87.5 0 ...................TA........GG. | ========== ====== ====== ====== ================================ =================================== ================== 5 32 96.3 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TCTGATCCTTTGGATCGCGTTACTCATTTTTTAGTCGCACTCTACATGAGTGCGTGAATTGAAATAACTCCTTAATGCTCCCTACGGTGCGCTTACCGTTGTCGCACTCTACATGAGTGCGTGAATTGAAATCCAATCCACATCATATTGGCCCAAATTTGTGTTAGTCGCACTCTATATGAGTGCGTGGGTTGAAATAAGCTCATGCCGCACTTTCCCAGGGCAGCCGCTCCGTCGCACTCTACATGAGTGGGAGGAATAAAATTCTTGTCAGTAGGTAGCTTGAATCATCAGTAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGTGAATATAAAATCCCTGGTGCATTCGCACTTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATCATTCCCTAAAGAATGTTATAATTAAGGCAGAAATCGCA # Right flank : AGCTTGAAAGAAATGTTGACAGTAGCGCTTGATTTATGGGTGGAAAACATGGCTATAGCTCAGTAGTCATGTTTTTAAATGGATTCAAAGTTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTTTAATTAAATAGGATTAATAAAAATTTGGTGCAAATGTGAGGTGAACATAAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGCAAATTATATGAAAGGGAAAACAAAATTCTACATTTGAATTTGTGGTTTTTGACAATCATTCCCTACAAAATGTTACAATTAGGGTGGAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATTAAACCTTTTGCGCTCCCGGCGCCAGTTTCTTAAGTCGCACTCTATATGAGTGCGTGGATTGAAATTAGAAACATATGAAGAGCTTGCCTAAACTTTGAGGTCGCACCCTATATGAGTGTGAGGAATAAAATTCTTG # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTACAAGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //