Array 1 422560-423582 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL635793.1 Neisseria mucosa C102 supercont1.1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
    422560	    33	  97.0	    33	G................................	CACCTTGACCGACTGAACCACTCGTTCCACCTT   	
    422626	    33	  97.0	    32	G................................	AAACGTCATCGTCATGTTGTTACGGTCGATGC    	
    422691	    33	 100.0	    32	.................................	AACTTGAGATGTAGAAATATTTTGACTATTCG    	
    422756	    33	  97.0	    32	A................................	CTTTCCCGCAATCTTTATTATCGTGTTTTATA    	
    422821	    33	  97.0	    32	G................................	TGCTGAGAATTTTCTTTTTTGAAATTCACAGG    	
    422886	    33	 100.0	    33	.................................	GTATCGTTTAGCCAATCAGAACCAATTTGCGAA   	
    422952	    33	  97.0	    33	A................................	TTTGCCAAATCTGAGACGGCCATTAGTGTCTTG   	
    423018	    33	 100.0	    33	.................................	ATAGAATTAACGGTTCGGAAAACCATCATTGCA   	
    423084	    33	  97.0	    32	G................................	ATGAAGCACAAATTGAAAGATTTTGAGTCATA    	
    423149	    33	  97.0	    35	T................................	ATCAGTATTAATGAAGTATTTGATTGAAAAGCAGA 	
    423217	    33	  97.0	    32	A................................	AGTCTATCGACAATCGCCTTACCGTTTACCAC    	
    423282	    33	 100.0	    36	.................................	GCTTATAATGTTGCGTAATGAGGCGGAGTTAATACG	
    423351	    33	 100.0	    34	.................................	GCAGTAATAGTAGTTGTAGCATCTGAAATGCCAT  	
    423418	    33	 100.0	    34	.................................	ATGCGGTAGGCAACAAGGGCTGGCATAAACAAGG  	
    423485	    33	 100.0	    32	.................................	TATGAAATTCATCACGAGAAATCATCAAATCA    	
    423550	    33	  93.9	     0	A............G...................	|                                   	
==========	======	======	======	=================================	====================================	==================
        16	    33	  98.1	    33	CCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC	                                    	       

# Left flank :   TGCACATGGGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGTTGCGGCGCGTGGCGAAATTGTGTTTGGATTATGGTGTGCGTGTGCAGTATTCAGTATTCGAATGCGACATCGCGCCCGACCAGTGGGTTGTTTTAAAAGACAAACTTTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATCTAGGCAGCAAATGGCGACGTAAAGTAGAACACCACGGCGCGAAGCCGACGGTAGATGTGTTTAAGGATACGTTGATTGTGTGAATCGCCAACCTGCGGTTCTCATGAAAATGCGGCAGGGTTGGCGAATGGGGATTGTTCTTTAACAATCAGGATATTGTGAATGCGGGTGTAACGGAAAAGGCTGTGTTATACTCGCGTTCGCGCTTTTCTTGAGTGCTTAGCGAGATTAGGTTTGCGAAACTTGATGTAGCAAGGCTTTTAAGAGAGGC
# Right flank :  CTCTGCCACCGTATCTTATGTCTGAGTAGGGAAGAGGGGCTGTATGTTCAAATATCGTCCAAGCAGGCCACTTTTCTTTTGATCCTTCGCTTTCTGAAGCTTTAGTGAAAGCAGTAGAGGATATTAGAAGTAAGTTATAAAGATTAATCAATAACAATGCCGTTTGAAAAAGTTTCAGACGGCATTTTTTCTATTTACATATTAAATTTAATATCATATTATCATTGAATCTGTATCAATTTGAATTTTTTAGAATTCCAATATGAGCCCCCTCATTTACTACGCCCATTCCGCCCAAGACAAACTCGGCAATCTCTTACATTACAAACATTGGCAAACCTTGCAAAGCCATTTGGTCAATGTTGGGGAAATAGCGGCGGAGTTTGCCCGGGTATTTGATGCACAGGAAATTGCTTGTCAGACGGGAAAGCTTCATGACTTAGGGAAATATCCAGTAGCCTTTAATCGCCGATTGCATGGTGGCCCTCAGTCAATCATGC

# Questionable array : NO	 Score: 5.85
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.90,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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