Array 1 38198-35738 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAFO010000011.1 Lactobacillus sp. MRS-253-APC-2B Contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 38197 29 100.0 32 ............................. AAAAAATGATTATCAGGACGATAAACAATTTC 38136 29 100.0 32 ............................. GGTAGGGCAATCATGAACAGTCTGCTTGGCGG 38075 29 96.6 32 ............................A CCACGAAGCTGTTCCAAAGGCGCTACAATGAA 38014 29 100.0 32 ............................. GGTAGTCGATTGATTTATTAATGCTAATCATG 37953 29 100.0 32 ............................. TACAGCGGATGCTTTTTGAAGATCATTCATTT 37892 29 96.6 32 ............................C GATAGTAACTACAAACAAACGCAAGTGGTGCT 37831 29 100.0 32 ............................. GTTTAGTTGCTTGACGATGTTGCGAACGTCCA 37770 29 100.0 33 ............................. GTCATGGTTTTCATAATCGCTTTGAATGTTGAA 37708 29 100.0 32 ............................. AAGCATTGGCAATACGGTAACAATGGCGTTAG 37647 29 100.0 32 ............................. TAGAAATGGTTACACGGCTGACGCCCGTGCCA 37586 29 96.6 32 ............................C CTTCACACCTAAGTTAGTTAAGCGATACTTCT 37525 29 100.0 32 ............................. TGCGGAAGGCAAACCATATCGGGTTTATCTAG 37464 29 96.6 32 ............................C CAATCGTTTTGAAAGGATTTCATTACCCAACA 37403 29 100.0 32 ............................. CGGAAAACCTACACTAGAGATAAAGTCCGACA 37342 29 100.0 32 ............................. GTGCAAAAATTAAGCTCGGCGCTGTGCCGGGC 37281 29 100.0 32 ............................. TACGAATGGTGTTAATTTCGTCTTCATGACCG 37220 29 100.0 32 ............................. CATTTGCCTGGTTGCGATAGATGGTTCCTAGC 37159 29 100.0 32 ............................. TCTTTCCGGTATGGTTCGGGCAAAACTGATAA 37098 29 100.0 32 ............................. GATTTCCGTTCCTTTTCCAAACTCGATTGTCG 37037 29 100.0 32 ............................. GACAAGCAATTGGAAACATTATTAGCCATTTT 36976 29 100.0 33 ............................. ATTTAACCTTGATGCCATCGCTAGACCATATCA 36914 29 100.0 32 ............................. TAAGCTCATTTGTGCCAGCTTGTTCTCGATCA 36853 29 100.0 32 ............................. TCCGCGCGCGCGTTGTAGCTTGATGTTACGCG 36792 29 75.9 20 ....................CT..CATTA GCTCAGCTTTGGCTGGGCTT Deletion [36744] 36743 29 100.0 32 ............................. GACAATGGTTCGTTATCATATCAGCGGAGCAA 36682 29 100.0 32 ............................. TTATCGGGAGTATGAAAATGTGTGAGTTTTGT 36621 29 100.0 32 ............................. ATCCAGCTCCCAAGCGCCACCGGTGATCATCT 36560 29 100.0 32 ............................. TAGAGTTGATTTATAAACATAAAAATGAACCT 36499 29 96.6 32 ............................C CAGTGCAAACTTCAATGCAATTGCGTAGTTGC 36438 29 100.0 32 ............................. ATAATCGCTTGTCGCGTGCTTTAGCCGTTTTC 36377 29 100.0 32 ............................. GGCAAGCAGATTGTGCAACGAAAAATCTACCC 36316 29 100.0 32 ............................. ATCACCTGGTTGGCAAGTCTGATTAATAACTT 36255 29 100.0 32 ............................. GTCCATGTAACTGTCCTCTTCGGCTTGACGCC 36194 29 100.0 32 ............................. TGACAGAATGTTGGTTGGCACCAGTGCATGTT 36133 29 100.0 32 ............................. CCCTTATCATCAGCTCGCAACTGCAGATTTTC 36072 29 100.0 32 ............................. GATAAATTTAAAATTCGGGGAGCTGGAGGAGA 36011 29 100.0 32 ............................. GACCTTGCTAACGAGATTGATAACCGACTTAG 35950 29 96.6 32 ............................C CGTCACCATCTGGATCAGCGCCAGGCTGTTTA 35889 29 100.0 32 ............................. GGCATAAACCGTCCCGTTTGGCGATCGCAGAC 35828 29 100.0 33 ............................. TAGCGTAAGTCTGCATGCTTGTAAGCCCAATTT 35766 29 75.9 0 .................A.A..CAG..TG | ========== ====== ====== ====== ============================= ================================= ================== 41 29 98.3 32 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : GTAAACAGTGAAATCATTTCAATCAGTGCAGTAAAAATGATCAGTGAACAACAGGTAGAAAAATTCAATCGATATATTAAAATAAAATCCGAAGTTCCGCCTAACATTCAAAAATTAACGGGTCTATCCAACCAGTTGCTAGATTCAGAGGGTGAGTCCCTAGAAAAAGCGTTAGATGAATTTCAGAACTTTATTGGTGATTATGCTATAGTTGGCTATAACTTGCTTTTTGATCAAACTTTTCTTAATGCTGCATTTATAAAAGCTAATAAGCAGATCATTTCAAATCGTATGATTGATTTAATGCCAATAGTAAAGAAAGATCAAAAGTTTTTAGATAATTACCGGTTGGCAACGGTTCTTAAAAATTATGAAATTGAGAACGGCCATCCGCATAGATCTGTATCAGATGCAACGGCTACTTTGGACTTAGCACTTAAACTGATCAAAAATGGCAAACTGAGGATTTAGAAAAGGCGTCATATAGGGATCTGTTTACT # Right flank : CTCAACTGAAACTGATTGATAACTAAAATAGCGCTATATCAAGCTTTGAAGCCTGGTATAGCGCTATTGGTAGTTTTAGACCTGTTGATCAAACCGTTATGCTGAAGCTTTGTTGGCACCGTGACGTTTGATCAGCCAACTGGCAACTGCAGCCAAAAGCATCCAGATCAAACCAACCAGACTAATCTTGCAGCCCAGTGCCAAACCTGGTACGTGGTAGTGCAGGACAACGCGATGAGTTCCCGCAGACAGGCGCAGACCGACAAAAGCTTGGTTGGTCCGCAGCAAGGCAGTCTTTTTACCATCAACGGTCGCCGTCCAACCGGTTGAATAGGGAATCGAAGAAGTCAGAATACCGACCCGCGAAGTCGTAATCGTTCCTGAAAGCTGATTGCGTTTGAATTTGACGTTTTTAAGCGCGTGTTTTTGAATCTGACGCACTTCTTGATTGTATTTGGTTCCCAGCTTTTCGGCAACTACTTGATACTGCCACTGATAGA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.40,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //