Array 1 82754-85880 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLKR01000006.1 Niabella yanshanensis strain HAMBI_3031 JHKIHDGE_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 82754 47 87.2 30 .A.C...C.C..A...C.............................. GCGTATACCTGAATCAGCAAGCCTTTTTTC C,A,A,G [82759,82764,82767,82769] 82835 47 100.0 30 ............................................... ACAATTACACCGTATATTTACATCATAATT 82912 47 100.0 30 ............................................... TAATTACTCCTGAGTTTTGGCGCGGAGCTA 82989 47 100.0 30 ............................................... TCAGAAAATTGTTATACTTCGCAAGTTGCA 83066 47 100.0 30 ............................................... TATGAGTTTTAGATATGTAAAGAAAGTAAA 83143 47 100.0 30 ............................................... TGGAGTAACCTTAGGCTACGGTCAGGTTTT 83220 47 100.0 30 ............................................... TTGTAATCCGCCCGCAACAATTCCAACTCC 83297 47 100.0 30 ............................................... CTGCAAACCTGATTCATTAATGAACTGTGT 83374 47 100.0 29 ............................................... AAGTAAGTTATGGAGTTTTTTACCTTATA 83450 47 100.0 30 ............................................... TCGTTCCAAAGGGACTGCCTGCCGATGACG 83527 47 100.0 30 ............................................... TCTGCTCGTTATTCAGGAACAGGCTCTAAT 83604 47 100.0 30 ............................................... TTAGTGGAACCCTAACGCCATCTTGCATAA 83681 47 100.0 30 ............................................... ATGTGTTACTAATGAGAGGTGTATTCGATT 83758 47 100.0 29 ............................................... CTTATTGACAACGTAACCAGGTCATTTGT 83834 47 100.0 30 ............................................... CTGTTTACAAAAGGAACCGGGAAATTTTAT 83911 47 100.0 30 ............................................... CATCAACACCATTATCTCTTCTTGATTTAT 83988 47 100.0 30 ............................................... TTGTAATCCGCCCGCAACAATTCCAACTCC 84065 47 100.0 30 ............................................... CTGCAAACCTGATTCATTAATGAACTGTGT 84142 47 100.0 29 ............................................... AAGTAAGTTATGGAGTTTTTTACCTTATA 84218 47 100.0 30 ............................................... TCGTTCCAAAGGGACTGCCTGCCGATGACG 84295 47 100.0 30 ............................................... TCTGCTCGTTATTCAGGAACAGGCTCTAAT 84372 47 100.0 30 ............................................... TTAGTGGAACCCTAACGCCATCTTGCATAA 84449 47 100.0 30 ............................................... ATGTGTTACTAATGAGAGGTGTATTCGATT 84526 47 100.0 29 ............................................... CTTATTGACAACGTAACCAGGTCATTTGT 84602 47 100.0 30 ............................................... CTGTTTACAAAAGGAACCGGGAAATTTTAT 84679 47 100.0 30 ............................................... CATCAACACCATTATCTCTTCTTGATTTAT 84756 47 100.0 30 ............................................... TGGGCGTACCATTCACCCTGCTCGGTATCG 84833 47 100.0 30 ............................................... CTCGAGCTTCAGTTCCCAGGTACTTTGCCT 84910 47 100.0 30 ............................................... CGAGGTTCTGAAGGAGTTGAATGGGAAAGT 84987 47 100.0 30 ............................................... AGAAGGAGGAAAGAAACGACTATTCTTTTA 85064 47 100.0 30 ............................................... TGAAAGATTGTGAGTTGTATACCGGTGACG 85141 47 100.0 30 ............................................... AAGATTATTTAATAATTTTGGGTTAAACCC 85218 47 97.9 30 ................................A.............. TCAACTGATAACCCGGACAAAGGCACGGTA 85295 47 100.0 30 ............................................... CCGTGAGCAAAACAGTCGTTGTATTTGTAA 85372 47 100.0 30 ............................................... TAAAGTTTATTGCTGACCACTGTAGAGAGG 85449 47 100.0 30 ............................................... GATACTTCATAGATATAACGATCCTCCTGT 85526 47 100.0 30 ............................................... CGAAACATATCATAAAGATATAAATAATAT 85603 47 100.0 30 ............................................... TTAAAATGTTAAAACCTCGCCGCTGGTCTA 85680 47 100.0 30 ............................................... TTAAAAAGTATGCGGATGAAGTTGGTAAGC 85757 47 100.0 30 ............................................... TTAAAGTAAAAATTAAATACAATGGCAACA 85834 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 41 47 99.6 30 GTTGTGAATTGCTTTCATCATTTTGATTTATCTTGGTCTTTGACAAC # Left flank : AGTACGCCTAACACTCTGTTTTCTGTAAGCAGATTATCAGGAAAACAATATCTGCAGATCTTCTCCGATTCCCTTTTCAGCAAAACCGGGAACGTTGAATTTGCCGATTTTAATAATGACCGTATACCGGATATTCTAGTGCAAAATATCTCAGATGTAAGAAGCAACTCGACTTATTATTTATACTTAGTTGACACGATCAATAACCGGATAAAAAAGATCGAGGGCTTCGAAGCCATCAAAAATCCAGTTTATTTACCTCAGTACGACCTCATATCCAATTATGTGATGTCAGGGAAAACATGGACCAGCTTCTATAAAATACAAGGCGATACTATTAAGGATTTTGATATTGTAATTTACGACAATCAAGCCAATGACAGCAGTTATGACCGGGACTACAGGAAAGCAATTCAATCTATATTGAAAAGAGAACCAAAACGCCGATAGAACAATCGGCTTTGGGATTCTTCCACTTGTGGGCTTAGCCGGCTATAAAT # Right flank : CACGATTTGCTCAAAGCCGCCACAGCAGAGGATTTCCCGTTGTCAACAGGATAAAAAAATGGGCATTTTGCCCATTTTTTTATTACTATCCTTCAAAATTCCATTTTCCTAATTATCAGAATAATTCAAGCTGCTGGGGGGCGAGCGGGGCCTCAATCAATTCTTTTCCCCTGAAAATTTCCATCATCCCGAACTGTTTATCAGTAATATTAAGTATCCCGATATGCCCTTTAGCAGGCAGGATCTTTTTTACCCTTTGTATATGCACTTCGGCATTTTCCCGGCTGCTGCAATGCCGGATATACAAACTGAACTGGAACATAGAAAACCCATCATCGAGTATCTGCTTGCGGAATTTCGCATAGATCTTTCGCTGGGCTTTTGTCTCCGTTGGCAGGTCGAACATAACAATTACCCACATAATACGGTAGGCATTTAAACGTTCAAAATCCATATCAGGCAATATCTGTTGGCAGAACAGGGTAAAGCAGTTTTCTTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATCATTTTGATTTATCTTGGTCTTTGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //