Array 1 173536-174495 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048270.1 Lactobacillus panisapium strain ESL0411 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 173536 36 100.0 30 .................................... GTTTCTGATTTTGATAAAAAGGTATTCAAA 173602 36 100.0 30 .................................... TAGGTTGTGGTACCTTAGGTCTGGCAACCT 173668 36 100.0 30 .................................... AATCATCTACGATTATTGCAAATGCATCCA 173734 36 100.0 30 .................................... TGCAGATCTTGCACTTACCCCGCCCTGACA 173800 36 100.0 30 .................................... ATATATGAATAATTAGTATCTGCTAAAGCT 173866 36 100.0 30 .................................... ATTAAAAAAATGTATTTGCTTAATCATAAA 173932 36 100.0 30 .................................... AGACTTAAGCGGTGTTTATCTATTAAGTAG 173998 36 100.0 30 .................................... TCGACTTCAGTAGATTTATCATTTGTCACA 174064 36 100.0 30 .................................... GACCTACCAGCTGTCTTAGCAGAAGTACCG 174130 36 100.0 30 .................................... TAAAGCAAAAGTCTGATAGTCAAATAGAAA 174196 36 100.0 30 .................................... GCTAAGGAACCAACCGGTATGAACAATCCA 174262 36 100.0 30 .................................... GCTCGCCTTTGTCATTAAGTTTGACTTCGT 174328 36 100.0 30 .................................... ACAACATTGGCAGTGTTGTTAATATCGACC 174394 36 100.0 30 .................................... TGGTCAGTAAAGACTAGCTTAGTATAGTCA 174460 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.8 30 GTTTTAGATGGTTGTTAAATCAGTGATGACTAGAAC # Left flank : CTTCATGCTTTTATTTGAAAAAGCTTTTGACATGGTAGAAGTTTCTTTAAAAGGGTACTAATAACTTAGATGAAATCACACGTAATAAGATATTTTGTGCTTTTAGCAATTTTGAATTAACATTATCTGATTCACTGCTTCTGCAAAATTTGCTGCTAGCAATTGATTTTGATGAAGATTTAAAAACGCTAATCAAAATGGTGGATTTGCATCTAGCTGAGAATATATTAAGTGATTCATATGATATAATTGAGATGGTTCTATAGAGATTCACCAAAACTGTAATTTGAAAACAGTTCCTGTCTTTTGCAATGTTATAAATTATTTGAATAATCAGAATTAGCGCAAATTGCAAAGCGAATGAGGTTAATGGTTGTCCTAATTGAATTCACATCTTCGGATTTTTTGGTTGTTTCTGGGGATGCCTATTTTTATAGCGTTAATGAAGGTTTAGTCGACTGGTATTAACTGCTACATTAAAATTTGATGATAAAACATCG # Right flank : TAAAGTGGTTGTAATAAAATTTGATTTAAGTTAACTATAGTATCAAGCTTAAGCAGCTAGCTTTTTATGTCAATTATGGACGTAAATTTTGAAAAATAGCGAATTCACACTCTTTAGTAGTAATTTAATGGAGTGTTTAACCCAATGCTTTTCATTACCTGCTTAATTATTTAGTTAATTTTGCCAATTTTATCCAAAACAAAAGTCCTACTAAATAAAGGTTTATTTAATAGGACTTTTTAATTTTCAAGATTCGTGGTTGTTAATTAAGTTCCTAGCCAAAAGGTGTTAGCTTGTCAGATGATTTGAGCCTAGTTGATTTCGATATCACCGCTTTTACTGATTATTTTGAGTAAAGGAGTGCCATGATTGATTTTCTTATAATGCTTTCGCTGCTCACGACCCTTAACTTCGATATCACTGTCGGAAGTAGTCGATAAATCATAACTGATATTAGTCATCTTATATGATTCAAAATCGCCGTCGTTTAATTTAAAGGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATCAGTGATGACTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 425538-427158 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048270.1 Lactobacillus panisapium strain ESL0411 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 425538 36 100.0 30 .................................... CTCATTTATGAAAAATGGGACATTCCACGA 425604 36 100.0 30 .................................... ATTTTTTTCGGCAAGAAAGTGGTTCAACAA 425670 36 100.0 30 .................................... CTCTCCTTAAAATATAGGCTTAAGCCCTTG 425736 36 100.0 30 .................................... TATTAACCTCTTCGTTTCATCTTTATGATT 425802 36 100.0 30 .................................... TGATGACAAGACGGCTTTAACTACCTTATC 425868 36 100.0 30 .................................... TTATTTCAAGCGGATCAAATGTTACAGGTT 425934 36 100.0 31 .................................... CTATACGTCTATTTGACGCCGAGAAGTCACT 426001 36 100.0 30 .................................... TATTGCTGACATTATTAAGCATTCGGCGTA 426067 36 100.0 30 .................................... TCCTGGTCAACCCACACGTGTTTTGTCCAA 426133 36 100.0 30 .................................... TTACGCACCAGATATCGGACCTAGTCATTA 426199 36 100.0 30 .................................... TTATAGGTATTTTTATCGCCTAGTTTAATT 426265 36 100.0 30 .................................... AAGACTTCGACTATTCAGAACAGCAGATGG 426331 36 100.0 30 .................................... TTATTCATCCCTAATCTTTCGACAATATCA 426397 36 100.0 30 .................................... TGCGTATGTGGTCTTTTAATTAACTGTAAA 426463 36 100.0 30 .................................... CTTGTTAGTTGCTTAGTCGGTGCATTGATC 426529 36 100.0 30 .................................... TATCCATGTGACGCTTGTCGGTTGAATCAG 426595 36 100.0 30 .................................... TTCCTTTCCAAGCAGATTTGAGTCCCTTAG 426661 36 100.0 30 .................................... ACGGCAGATGATGGTGTGGTTACCAGAGCG 426727 36 100.0 30 .................................... TAAATTTACAGACCAACGAGCAAGAAAGCC 426793 36 100.0 30 .................................... AGAAGTCCAAATCAAAACCAAGTGGGGCGA 426859 36 100.0 30 .................................... GCAATTACAGGCATTATGGTGCCTCGGGTA 426925 36 100.0 30 .................................... ATTTTTCCTCCTGTACACTAACTAATTATA 426991 36 100.0 30 .................................... TGTGTATCAAAAATCAAAGTACCATCAGAA 427057 36 97.2 30 .............................C...... GAATAGAATCATCATCATTTCTGATCTTAT 427123 36 91.7 0 .................G...........C.....T | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 99.6 30 GTTTTAGATGGTTGTTAAATCAGTGATGATTAGAAC # Left flank : AGTGGTGATATTACTAAAAAATATTTAACCAAAATTGTTAGTACTTATATCACTAACTTAGATGAAGCCACGCGTAATAAGATATTCTGTGCTTTTAGCAATTTAGAATTAGCATTATCTGATTCACTGCTTCTTGAAGATTTACCACTAGCAATTAACTTTGATGAAGATTTAAAAAAGGTACTTAAAATGGCCGATTTGCATCTAGACGAGAATATATTGAGTGATCCATATGCTATAATTGAAACGGTTCTAAAGATTCATCAAAATTGTAATTTAAAAACAGTTCCCGTGTTTTGCAATGCAACAAATTATTTAGATAATCGGGAATTAGCTGAATTAGCACAAATTGCAAAACAAATGAGGTTAATGGTTGTTCTAATTGAATTCACATCTACAGATTTTTTGGTTGTTCCTGAGGATGCGCAATTTTATTACATTGACGAGGATTTAGTCGACTGGTACTAACTACTACATTAAAATTTGATGATAAAATATCG # Right flank : TTAAAACATCCATCAATAAAGTTTGCTTTAACTTGCCTTTATTGTCGAGCCTGAGCCGTTGGTTTTTATGACAATTTTGGACGCACAACTTTAGAAAGTAGCGAGTTCACGACCTCTTTATTGACAGTAATTTCAGAGATTGTTTGCCCCAGAGCTTTACACCATCTGCTTGCTTATGTGAATTAACTAATTTTGCTCAACAAAAAAGGCACATCGTTTGTGATGTGCTTTTTTAGTGCATTTACATATAACTAGCTGTGAGCTGTTTTTACCCATGAATCATTCCCTTTTAATTGGCGGATTATGGCGCGATAGGGAATAAAGGCTAGCACCCAGCGATAAAAGGCAAAGCTAAAGATTATTCTAAAAATCTTTAAGCGATTTTTAGGTGGCTCTAAATTCGATTCGTGCCACTGTTTTTCAATCATTAACGTATTGACCAGGTTTTCTATGAATAATAATGTGAAAATAATTGCTAAACCAATTAATGGCCGATAGAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATCAGTGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //