Array 1 17561-18674 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNAL01000037.1 Deinococcus piscis strain CGMCC 1.18439 sequence037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 17561 37 100.0 34 ..................................... CTGCCCGAACTGGTGAGCGAACTGAAACCCGCCC 17632 37 100.0 34 ..................................... TTGGAGCATTTGCACGGCCCGCCAGCGCCGCTCT 17703 37 100.0 35 ..................................... CGCGTCGGGGAAGACATCCCCGCCGGTGCCCCCTG 17775 37 100.0 34 ..................................... AAAGAGCGGCAAGACCATCTCGGCGCAATCAGCA 17846 37 100.0 34 ..................................... GTACTCAGCCAGCCAGTCGGCGGCGGGAATGAAG 17917 37 100.0 35 ..................................... CTGAGCACTGCCAGCGTGGCACAGATTGCCATGCG 17989 37 100.0 35 ..................................... CATGCTGTCGCCCTGAATCTCGACAACCAACATGC 18061 37 100.0 35 ..................................... CATGCTGTCGCCCTGAATCTCGACAACCAACATGC 18133 37 100.0 37 ..................................... CCGGCTGTATTTCGCGGCTGGCGACTCATCAGATGCA 18207 37 100.0 37 ..................................... ACCACCAGCACCAGCGCCGCCTGAGCGACGTGGGCAC 18281 37 100.0 32 ..................................... TTGGCCTGAGTGTCTGGGGGCTGTGGTACTGA 18350 37 100.0 34 ..................................... TTGGAGCATTTGCACGGCCCGCCAGCGCCGCTCT 18421 37 100.0 37 ..................................... AGATACCAGTGCATGAATTGGATGCGGTCCATGTCGG 18495 37 100.0 35 ..................................... CTGCCTGGGAGCAGGCTGCACTGCGCGTGGCAGGC 18567 37 100.0 34 ..................................... CAGCTCGTCATGCAGTTGGGCGCAGTGCGGGCAT 18638 37 81.1 0 ...........................CTT..ATCT. | ========== ====== ====== ====== ===================================== ===================================== ================== 16 37 98.8 35 GTTTCAGCCTTTCTTCGGAGGGGCTGAGGATTGAAAC # Left flank : ATGCTCTCGGCACAGGCCAGAGCCACGCTGGAAGCGCAGAACTTGAGCACCCGCACCGCCTTTTTGCAGTTGCTAGAGCGGCTACGGAAGGGAGAAGCGGGCGACTGGCAACGCAGCGCCGAAACCCTGAGCGGCGGAATCAGCAAGTTTCCCAAAGGCCACAGTGCCCTGCGGGCCTTCGTGACTGAGCGCGACGGGCTGCTGCATGTGCTGGAGCTTTCGGGCCACCGCGAAGAACGGCGTTACCAGGAACTGATGCAGACCATTCGCTGGAGTGCCTACGAACACGGCGACTGGAGCGCACTACCCTAAACTGGGCGTACGCGCGAACCCCTCGCTCACACCAAAAGGTGGGGAGGTTCGCGTAAGGCAAAAAGTCCGTGCGGGACGCGATGCATGACAAATAAATGAATGAAGTGGCTGGCGTGGATGGATTTTCGGGAGGAGTTCGCGCAAAATGCTTTCGGGGAGCCGTCCGACACACGCTTGGGCGGTGAACT # Right flank : CTAGCTGTTGTGCTCCCTCATTACAAGAAGGAGCAGAATTGAGGAGGTCATTTTGGTATGGATGATGATTCCGTGATGCTTTCAGCCCTCCAGCACTACGCTTTTTGCCCGCGCCAGTGCGCCCTGATACACGTAGAACAGGTCTGGAGCGAGAACGCGCAGACCGCAAAGGGGCACCAGAACCACGAGCGGGCACACGCGGGTGGCAGCGAGGAACGCGGCGGGGTCAAGACCCTGCGCGGCTTGCCGCTACTTTCGCGGCAGCATGGGCTGTGGGGGGTGGCCGATGTGGTGGAACTGCACGGCGAGCAGCCCCTTCCCGTGGAGTACAAGTCAGGCCGAGCCAAGCCGCGCCTGGCGGACGAAATTCAGCTTTGTGCCCAGGCCATGTGCCTGGAGGAAATGTTTGGCGTGAGCATTCCGCAAGGCTCCATCTACCACGCGGCCAGCCACAAACGGCGTGAGGTGGCCTTTACGCCCGCGCTGCGTGACGAGGTGCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGCCTTTCTTCGGAGGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 1 14580-12660 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNAL01000012.1 Deinococcus piscis strain CGMCC 1.18439 sequence012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14579 29 100.0 32 ............................. TTGCGTATTCCATATTTACTCCTGCCACCTTA 14518 29 100.0 32 ............................. GCGACCGCGTGCCCCTGGAGGCCCTGGTGCCG 14457 29 100.0 32 ............................. GCGGGGCAAAAAGCGTCACCCCCGCCGGGTGA 14396 29 100.0 32 ............................. CTGTAGGCGTGGGTGTCAGCAACGGCATGACC 14335 29 100.0 32 ............................. CACCTGGCCCCGCTCCAGCTGGAGGTCATCCG 14274 29 100.0 32 ............................. TGGGACCGGGCTTTCGCGGCCCTGAGTCGGCT 14213 29 100.0 32 ............................. CAGCCGCGCTCAGCAGCAGCTCATCACACAGA 14152 29 100.0 32 ............................. GCCCTGGAGGTGAGTGAGGAGCTGAACGCGGC 14091 29 100.0 32 ............................. AGCGCCTGGTGGCCGTGAAGGGTGTAGGGGAC 14030 29 100.0 32 ............................. GCCCACTTCACCATCTGGGGCCAGGATGCCCA 13969 29 100.0 32 ............................. CAAAAAATGAGCTTATGAGACATGGCTTATGG 13908 29 100.0 32 ............................. CCCGTGTGGTGCCGCCCACGCCGGAGGACCGG 13847 29 100.0 32 ............................. AGCACCCAAACCGCTGAACTGGTGTGGGTGCG 13786 29 100.0 32 ............................. TTTCTGACCCGGCAGACAGACCGCCCGGTGGC 13725 29 100.0 32 ............................. GCGCGGATTGAAACCGACTGGGCAGACCGGGT 13664 29 100.0 32 ............................. TGCGGGCGCTCTGGGGCGTCCATGTGGACCGG 13603 29 100.0 32 ............................. ACCCCCAGTGCCCCCGCCGTCAGCATTGGCAG 13542 29 100.0 32 ............................. TGCTTTTCGTCATCGTCAGCGCGGGCGATTTT 13481 29 100.0 32 ............................. AAGGCCGTTCGGGAGCTGGATTATTCTGCAGG 13420 29 100.0 32 ............................. ACGCCTCTGCTCCGTGATGTGCTGGTGCCACT 13359 29 96.6 32 ............................T ATGTCCCCCTCACCACGGCCATGCTGGCAGGC 13298 29 100.0 32 ............................. GTGCTGAACGCGAATGCAGCCGGGGCGCAGTG 13237 29 100.0 32 ............................. GCCCCGACGAGGGCACCCAAGCCGCATGATTC 13176 29 100.0 32 ............................. CCCCGCTGTGCCGGATAGGCGGGCGGGGCGTG 13115 29 100.0 32 ............................. CGCTCGAACATCCCCGGCTCGGTGCGGAGGAC 13054 29 100.0 32 ............................. CCCAGGGGCGGCCACGCGGGTTGTTCCTCCGG 12993 29 100.0 32 ............................. TCTGGGCATAGACTCACGTCATAGATCACCGT 12932 29 100.0 32 ............................. CGGATGAGTTCCGCCAGGACTTGCATCTGTGC 12871 29 96.6 32 ............................T GTCTCAATCAGAGACATCTACAGACATTGCTA 12810 29 100.0 32 ............................. CGGAGCGCAAGGAACTAGAGGATGAACGCCTG 12749 29 96.6 32 ............................A CGCTGGCACAGGCTCAGGCTGAGAACGATGAC 12688 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 32 29 99.6 32 GTTTTCCCCGTGCAGGCGGGGATGTTCCG # Left flank : ACAAGGACGACCCACAGGGAGAAGACGTGGGCGACCTCTACGACCCGGACGGCGACGTCGCTGGGGGTAAAAACTATGCCTGAGCAGGTGGGCGCATGGTGGTAATGACCCTGGAAAAGGTGCCGGACTCGCTGCGCGGCGAGCTTTCGCGCTGGCTGATTGAGGTGCAGACCGGCGTGTATGTCGGCGCGGTAAGTGCCACTGTCCGCGACCTGTTGTGGGACAAGGTCGTGCAGCACGCCCGCGCTGGCCGCTGCACCCAGCTGTTTCGCAGCAATGGCGAGCAGGGTTTCACCATCCGGATGCACGGCGAGGCTCGGCGGCAACTGGTGAACATAGAAGGCTACCAACTGGTGGCCGTGAAAGACGCCCGCTACGAGAAGCTTCTGCCCGACTTCATGGCACAGGACGAGGAGGAGTGGGAAACATTGTGATCTGTATCCAGGGTGTGTGAGGATACCAAACGGCTCCTTTGGGCCGAGAAGCATGACAGGAGAAGT # Right flank : GCCACAGTATCACTCAGCAATCTGGGTCAAATTGGTATGCCCTTTAAAAACCAAAGTACTTTTGAAAATCGAGAACCTTTAAGTTAGACTCCTGTCGTGAAACAAAAATTATTCGGCAGTTCCCTCCTCGCCTTGACCCTGCTGGCCTCGGCCAGTGCAGGCGGCGCAGGTCAGCCAGCTCGGCCTATCGTGGTTCCTTCTGCTCCGGCGCAACCAGGCGTACATGCGGCGCCCAATGCTGCCAAGCCCGTGTCCAGCGGCTACAGCATGCGCGTGGTCAGCACCGGCTTCGAAATGCCCTGGGAAATTTCTACGGGGCCGGACGGCTGGCTGTGGGTGACGGAGCGCCTCGGCAAGCGTGTTGTTCGGGTGAATCCTCAGACGGGCACCAAGCAAGTTGCCGTGAATATTCCCGAAGCCCTCGCTGGTGGGCAGCACCTGGGTGTGCTGGGCATGGCGCTGCATCCTGATCTGCTGCGTGGCGTGGGCCGGGACTGGGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGCAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 2 27812-28755 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNAL01000012.1 Deinococcus piscis strain CGMCC 1.18439 sequence012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 27812 29 100.0 32 ............................. TCCACGCTGCGGGCAATCGTTCTGATTTCTCG 27873 29 100.0 32 ............................. AGCAGCGCCACTGGATAGCCGACCAGCTAGAA 27934 29 100.0 32 ............................. TCACGCAGGGCCAGGTGCACGGTGAGCAGTCC 27995 29 100.0 32 ............................. GCGTCCGCGCCCGCGTGATGAATTTCGATACG 28056 29 100.0 32 ............................. CACACACCATCCCCTGGGCCCCCGAAGCTAGA 28117 29 100.0 32 ............................. AGACACATGAGGCGATCGAACGCCGCGTCGCG 28178 29 100.0 32 ............................. ACCAGGTGTGAGTTACAGACTCACCAGGGTAT 28239 29 96.6 32 ............................A TCGGCGCTGTCGGCGCTACCCGGTGCGCTGGC 28300 29 100.0 32 ............................. GGCCTAGGCAGGTGCGGAGACATCCCTGGCAC 28361 29 100.0 32 ............................. TGGAGACGATTTCGCCCAGCGCAGGGTCACGG 28422 29 100.0 32 ............................. AGGCGGGCGGCGAAATCCTCGCGCAATCTGAG 28483 29 100.0 32 ............................. TGGCCGTGCCGCCCGCCGCCAGGGCACGCCCC 28544 29 100.0 32 ............................. TACAACCACGAGAGAACCACTCCACCGGAAGT 28605 29 100.0 32 ............................. GTGTCGAGTGAGTGCCCCACCCGGTGCTGTCC 28666 29 100.0 32 ............................. CTGAGCGGGGCATTCAAAACCGTAATGGAGGC 28727 29 86.2 0 ............C........G.C....C | ========== ====== ====== ====== ============================= ================================ ================== 16 29 98.9 32 GTGTTCCCCGTGTAGGCGGGGATGTTCCG # Left flank : GCGGGCCGACCAAACTTCAGCCGGTGCCGCCGCCGGTAATCTTGACATCGTCGCCCAGGGCAACAGCGTCTCCCGCCGCCGAAGCGGGCAAGCTGGAAAGGCACAGGGCGAGCAGGGCAAAACGGAACAGGGCATGGAACATGGGTGGACCTCCAGAGGTCAGCGGCACGGTGGCCGCGCATAGGCCGCCCTCCCACGCACCCGCCGGGGTGTGTGGAGCGTGCAGGACACTCGGCACTGCGCTGAGGAAGGCCAGGACGAAACGGTGTCGTGGCGTAAGCCGCGCAGCCGGTGAGGGCTGAAACCCCGCTGTGGTGGGGGTTTTCTCTCGCGACACCGTTACTCTGGAGGCGCACCGCGTCTAAACATGACATCCGCACCAAAGGCGCTACACTGCGCCTCAGGCCCAGGCCTGCGCTCTATGAAAATGTGTGCTATATCCAGGCCCTGCGGTCAGACCAGAAGGGCCAGAACTGGCCAGAAGTGCGTGCTGGTGAAGT # Right flank : CCATCAAGTGCAACTTACGAAAAGACAAACTCGCTCTTGGCGTAGCCCTGAAGGTACAGCAGCGCCGTCAGGTCGCCGTGGTGGATGCGGAGATCACACTGCGCCGCCACGGCGGGTTTGGCATGCAGGGCCACACCAGCGCCGGCCAGCCCCAACATGTCCAGGTCGTTGGCCCCGTCACCGACGGCCAGCACGTCCTGCGGCCTCAGCCCCAGCCGGGCGGTGATGTCCAGCAGGGCCTCCACTTTGGCCTGGCGGCCCAGAATGGGGTGGGCCACTTCGCCCGTCAGCCGCCCAGACTGTGTCAGCAGGGTGTTGGCCCGGTACTCATCGAAGCCCAGCTGCGCCGCAACCCCCTCAGCAAAGGCCGCAAAGCCCCCCGATACCAGCGCCGCATAAGCTCCGTGTGCCCGCATGGTGGCGACCAGCTCGCGTCCGCCCGGTGTGAGGGTAATCCGCTCTGTCAGCACCTGCGCCACGGTGCTTTCGGGCAAGCCGCG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 8474-7222 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNAL01000055.1 Deinococcus piscis strain CGMCC 1.18439 sequence055, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 8473 37 100.0 35 ..................................... TTCTCTGCGCGGGTGCGCCGCCCGTTGGTGACGGC 8401 37 100.0 33 ..................................... CTGCCGAGCGCCGTGAGCGTGAGCCTGGACCGC 8331 37 100.0 33 ..................................... CTGCCGAGCGCCGTGAGCGTGAGCCTGGACCGC 8261 37 100.0 34 ..................................... TGGGTGCCGGTGTCCTGATAGTCGAGGGGGTTGA 8190 37 100.0 34 ..................................... ACGTACATGGGCTTAAAGCTCAGCGACTTGGTCA 8119 37 100.0 36 ..................................... GTGCCAAGCGTCCTTTAGGTTGCCCTTGTGAATTGC 8046 37 100.0 33 ..................................... GTCGGCGTAGGGGTAGGGGGCCGCCCGCAGGTG 7976 37 100.0 35 ..................................... AGGATGCCACGGAAAAAGTGGCGAAAGCCGATGAG 7904 37 100.0 36 ..................................... AGGCGCTGGCCGAAGCGGTGAACATGTCTGGAGCCT 7831 37 100.0 35 ..................................... CGCCCATACCTGTTTTTTGACCGAAACGGGTATAT 7759 37 100.0 35 ..................................... AACTCCTGGGCCAGCAATTGGGCCTCAGCGTCCGT 7687 37 100.0 34 ..................................... CTGAAGGGTGTAGGGCGGCACCGTCACCACATAG 7616 37 100.0 36 ..................................... TTACATATCCTAGAGTAGCCACGAAAGCTAGGGTGT 7543 37 100.0 34 ..................................... AGCTTCAGGGCGCTCATGCTGCACTTCCAATCCC 7472 37 100.0 36 ..................................... GCCACCGTCCACAATGGACGCGGAAATAACGTCCGT 7399 37 100.0 33 ..................................... TTCTCCTGCATCTCACCACGCTCGGCACCCTGC 7329 37 100.0 35 ..................................... GCCAAAAATCCTAGAACGAACAGGCCGCCCAGTAC 7257 36 81.1 0 ...............C...........AC..-..CCG | ========== ====== ====== ====== ===================================== ==================================== ================== 18 37 98.9 35 GTTTCTGCCTGCCTTTGGGTGGGCAGTGGATTGAAAC # Left flank : CCCGCCGTATCTGCACCGCTGAGGAGCACCGATGATTGACTTGCTGATTTGCTACGACGTCAAGACCGAAACAGAGGGCGGACGCCGCCGCCTGCGCCGGGTCGCAAAAATCTGTGTCGCGCATGGGCAGCGCGTCCAGAACAGCGTCTTCGAAGTCAGTGTGACTGACGTTCAACTGCTTCAGATGCGCGAGAAGCTGCTGAACGCTATGGACGTGACCGAGGACAGCATCCGCCTCTACCGCCTGCGCCAGCCCCGCGAAAAGTTCGTGGAGGCGCACGGCGTAGACAAATACCTAGACTTTAATGAGCCACTGATTCTGTAGCGCGAACGTGGTGCGCCGGAAAAACTCCGGGGGGTTCGCGCCACTCCCAAAGTCCCTCTGGGACGCGGTGCATGACAACTCCATATCCCAAAAGGTGCCGGTGTATGGACTTCGGCGCGATGTTCGCGCAAACTGGCTCTGGGGAGCCGTCTGGAACACGTTCTGGAGGCGAACT # Right flank : ATATCCTTGACAGAATTGTTATTGACAAAGCCGCTCACATGCCCCACTCGTTCTATGACCACAGCAGCTTCACAAGCCTGAGCTACTGGGCCGCTCGGTACAACGCCAGCAACGCGGACATTCACGACCCAAGCGTCTTTACTCACGTCGTGCCGCCGAAAATCTGTTCCCTCTGCACCCACCGCACATTAAGCATCATGTAGTTCTTGGCACTGCAGCCACGTCTTACGCAAGAGCATATTTGGCCCATGAGCCACCGGCCCGACCCCCTCTACCTCCCGCCCACCGGGCCTTTGCCCGACCCTAACCCGGAAACGGGCGACCCTGCCCATCCCCAAGGCTTGCCCCGCGCTGGAGTGAGTGAAACACACCAAGGAGCGAACCTGCTGTTGCCCGCTGGTACCCACCAAGCCTTCTATGAGTGCCTGGTCCGCGAGAAAGCGGAGCGTAAAGCGGCGAACGTGGCGAAGAACCGTCCGAAGAAGAAAAAGCATTAGCAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTGCCTGCCTTTGGGTGGGCAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.00,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 1 5757-3410 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNAL01000007.1 Deinococcus piscis strain CGMCC 1.18439 sequence007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5756 29 100.0 32 ............................. GAGCGTGACCTATGACAATGCCTGAGAATCTC 5695 29 100.0 32 ............................. TCACGGGTTTGTAACTACACTCCACCGCAGTC 5634 29 100.0 32 ............................. CCCGTCATGCCCAGGGCGCTGATGATTTGCGT 5573 29 100.0 32 ............................. AACTCCAGACTGTCGCGCGGACTACTCGCATT 5512 29 100.0 32 ............................. CACGCGCCGGGCAGCCCCCGCGCCGAGTTCTG 5451 29 100.0 32 ............................. CTTACATCAGGGAACATTACCGCGACCCAGAG 5390 29 100.0 32 ............................. CTGCGCCCGCAGGGGGAGGCGGCTGGATGGTG 5329 29 100.0 32 ............................. CGGTGCTGCTGCTGACCCGCTGCACCCGCCTG 5268 29 100.0 32 ............................. GCGGCGCGGGAAGGGCGCATCGCTGACGCCCG 5207 29 100.0 32 ............................. TCGGTGATGGAGTTTATGACCTGCCAGATGGG 5146 29 100.0 32 ............................. AAGCCTGGGAAATCCTGGGCATTTCCGGCGAG 5085 29 100.0 32 ............................. TTTTCCACGCCATCGCCCTCTACCGTCACATG 5024 29 100.0 32 ............................. CGGGGCCGTGAGTACCAGCAGGCGGGCGCGGC 4963 29 100.0 32 ............................. CGGCAGCCCAGGTGTTGAGAGTAGCTATGGCG 4902 29 100.0 32 ............................. CGCCTTCACCCTGGTGCAGACGCTCTGGCAGA 4841 29 100.0 32 ............................. CGCAGTTCTCGCCTGAGCGGGGAACGTCGGCC 4780 29 100.0 32 ............................. AGGCGGATGCAATCTGCGCCCTGATTCCCGAA 4719 29 96.6 32 ............................C CCATCGCGTTTATTGCGACGGGGCCAGCAAAC 4658 29 100.0 32 ............................. GGTGCGCTAAAGGCCCAGCGTCGGATGCAGGG 4597 29 100.0 32 ............................. CGTGAAACCGGCCCCAATCGTGAACGGCGCGC 4536 29 100.0 32 ............................. ACTTCACTGACCGCACTCCCAATTATGGCGAT 4475 29 100.0 32 ............................. AAAATGGCCGTGGACGTGAAACCGGCCCCAAT 4414 29 100.0 32 ............................. CTCGTAACCTGCAAAGGTCTTGCCGTTGGTCA 4353 29 100.0 32 ............................. CTCGTAACCTGCAAAGGTCTTGCCGTTGGTCA 4292 29 96.6 32 .G........................... CCCCCCGAACCTGAACGGAACGGGGGCTGGGT 4231 29 100.0 32 ............................. TGCAACTCCTGAATCCTGAGCGCATCCGGTTG 4170 29 100.0 32 ............................. CTCCTCTACTGGACCGGCTACGTCCTGGGCAC 4109 29 100.0 32 ............................. GTGGGCACCTCCACGCCGTCCACTGTCATGTG 4048 29 100.0 32 ............................. CACCTGGAGGCGTACCGCACTGCCGCTGAGGC 3987 29 100.0 32 ............................. TTTGGCGGCGCAGTGGCCGCACTTCCGGCAAT 3926 29 100.0 32 ............................. ACTTGTACTCCGTGGTTTGCCAGAACAGGAAA 3865 29 100.0 32 ............................. TTTGGTCAGCAACCGGATGCGCTCAGGATTCA 3804 29 100.0 32 ............................. GCATCGCTGGTTTGCCACCCCTTGACCACGTT 3743 29 100.0 32 ............................. GCATCGCTGGTTTGCCACCCCTTGACCACGTT 3682 29 100.0 32 ............................. GTCTCTTCATCCCCGGCAATGGCGCGGCATTC 3621 29 100.0 32 ............................. AACTCTCTTCTCAGCCAATGGAGAGCTTTTTG 3560 29 100.0 32 ............................. CCGAAATGGGCCACCAGGGCGCATAGCGCCCG 3499 29 100.0 32 ............................. TGGAACCGGAGCCGGAGCCGACGCCGGAACCG 3438 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.7 32 GTTTTCCCCGTGCAGGCGGGGATGTTCCG # Left flank : ATGGAAGACCGCATTCAGCCCGGCGATGTGATTGTGATTCGCTACGAAGGCCCCAAAGGCGGCCCAGGCATGCGCGAAATGCTCTCGCCCACCTCCGCCATCATCGGCAAGGGCCTGGGCGACAGCGTGGGCCTGATCACCGACGGGCGCTTTTCGGGCGGCACCTTCGGGCTGGTGGTAGGTCACGTGGCCCCGGAAGCCTACGTGGGCGGCCCGATTGCGCTGGTCCACGAAGGCGACACGATTGAGCTGGACGCCGAGAAGCTGGAACTGAACCTGCATGTGGACGACGCCGAATTGCAGCGCCGCCGCAGCGAATGGGTGCAACCTGCCCCCAACTACACGCGGGGCGTACTGGCGAAATACGCCCGGCTGGTCAGCGGTGCCGAGCGCGGCGCAGTCACCGACTAAGCGAGAGGGTGCAGAGATTGTGATCTGTATCTAGGCTGTGCAAAGATACCAAACAGCCCCTCAAGGCTGAGAAGCATGACAGGAGAAGT # Right flank : TCTTTTTCCCACCCTCCCGCGCCCCCTCACCCGCATGCGGCATCATGGGCCCTGTGAAGCTCACGGTTCTTGGCAGTACAGGCAGCATCGGCACACAGACGCTCGACGTGGCGCGGCAGCGCGGCTGGCGGGTGGAAGCACTGGCAGGCGGACGCAACCTGGACCTGCTGGAAGCCCAGGTGCGTGAGTGGCAGCCCGCCGCCGTGGCGGTGGCCGAGGCGAGCTACGCCCAGGCCAAAGCCCGCTTCGGTCAGACCGAAGTGGTGCCGCTGGAGGAGCTGGCCGTCCGTGAAGCCGACGTGGTGGTCAACGCCATCGGGGGCCTGCCAGGCCTCTCCCCTACCCGCGCTGCACTGGAAGCGGGCCGGGCCGTAGCGCTGGCGACCAAGGAAGCGATGGTTACCGCCGCGCCCCTGATCTGGGCAGCGGCAGCGCAGGGTGGCGGCAGTCTGGTGCCGATTGACTCGGAGCACACCGGCATCTACCAGTGCTTGGTGGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGCAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //