Array 1 9150-7017 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 9149 33 100.0 35 ................................. CTTTCTTGGCAGGCTGAGTGGTGTACTTCATAATC 9081 33 100.0 35 ................................. CTCTTAGCTTTTATGTGGCTAACAGGGTTAAAGGT 9013 33 100.0 34 ................................. AATGAACCGTTTAATGTTGTGTAAGTCAACGTCT 8946 33 100.0 35 ................................. TTAAGATGTTCTGGAAGTCTATGACGAGGTATCCG 8878 33 100.0 34 ................................. CCTAGAGCCACTAACAAATCATGCAACTTATCCT 8811 33 100.0 35 ................................. CCTGAAAGAGCACGTCCGCTGTATAACAAGCTCTA 8743 33 100.0 35 ................................. TTTAACTCTTTGGAGATGTGAGCGAACTTCTCAGG 8675 33 100.0 36 ................................. CGGCAACATCTCTGATTTGGGAAGTTGCAGCAATGG 8606 33 100.0 36 ................................. TCTGAAGCAGTAGAGGTACGGGTGTGGCACACCAAC 8537 33 100.0 34 ................................. ACCAGTGTTTGGGTCATACATGTCATAACGGAAA 8470 33 100.0 35 ................................. TAATAATGCAACGTAAAAACGTCGCTCGCCGTGGG 8402 33 100.0 35 ................................. CTGCAGGGTCAAAGAGGGCCGTAGCCCTCCCCGTC 8334 33 100.0 35 ................................. ACCCTTCTTACGCTTACCATAGAACTCAAGCAGCG 8266 33 100.0 33 ................................. ACATAAGCCATAGGGCTTGCGTTACTGATCGAA 8200 33 100.0 34 ................................. CCTGAGCCTGACCTGGAATTACGGTGCGGATCAC 8133 33 100.0 35 ................................. ATAATAGACTCACTATCGAACCGATCACTATTAAC 8065 33 100.0 35 ................................. CTTCAGGGCGAATGCTGCACCCTCTATTCCGTTAC 7997 33 100.0 34 ................................. TTAACATTGACTTTCAGGTTTCCACTCTCAAGTG 7930 33 100.0 34 ................................. CTGATGTCCGGTAAACAAGCTTTCATGTATTCGG 7863 33 100.0 34 ................................. AGTATCACAATGTTAGCCTCCTCGATCCTCGCCA 7796 33 100.0 35 ................................. TGTAATCTCCTAATACGATCGTATTCTTGGCGTTG 7728 33 100.0 38 ................................. AAACCTCCCCGTTCTAAATCAACCGCACAAGTTACATG 7657 33 100.0 34 ................................. AAACTATGGGAATTGGGTGCACAAGACGCATTCC 7590 33 100.0 35 ................................. CTCGAATGGATATTAACGCTCATCGGCAGATCCCC 7522 33 100.0 35 ................................. CGATAACAGAACTATCCATGTCCCTTCCTCCGTTC 7454 33 100.0 36 ................................. ATGGGATGCCGCAATCGGGTTAGCCTTTTCCCAAAC 7385 33 100.0 35 ................................. GTTTGTAATGCCGCCTGTGGGAATCGAACCCACGA 7317 33 100.0 34 ................................. AAACCGATTTAAAGATAAAGACGGGCAACTGATG 7250 33 100.0 33 ................................. GTCATATCGCGGCGGCTATGGCTCATGCAAACA 7184 33 100.0 34 ................................. ACATCATCCGTGGTTAACATCTCATTTAACGCCA 7117 33 100.0 35 ................................. TCTAACAAATTAATCTTTTGATCGGAAAAATTCCG 7049 33 97.0 0 ...............................T. | ========== ====== ====== ====== ================================= ====================================== ================== 32 33 99.9 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGATGTAAGCACGATAGATAGTGAAGGCCGAAGAAGACTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAATTTAGACGATTAAGATTCGAACTAGAAGAATTGATTGATAAGGATACAGATAGTCTTCGATTTTATAACTTAGGTGATAATTACAAAAGTAAAGTTCAACATGTAGGTGCCAAAGATTCCTATGATATGGGCGATCCGTTAATACTCTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGGAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATGGTCGAAAGTTTGTGATAACCGGTTTAAAGTAGTATAAATATCGAAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : GGTACAGGATAAACAGTGGCATCCTCTAAGGCAAGTCTCACTCCGTATTTTATAGATAAGTGGCCAATTCGAAAAAAGTTGTCTAACAAATTCATTCTTTTGGTGACTTATAGAAAAAGAAAGTGATTTGAATACGTTCATGATTGAGCTAATAACCCGGAAATGCCATTCTAATAATCCAGTCACTGGAGACATTTTGAGTAACATGCATCATGTTAAATCTGAATAGTTCCTCTGTCCATCGTTTGAAACAATAAGCCCTAGTAGCACACCTACCACGTCCTGGCTTTCATATGATTCGTAATATGACTTAGCTAGAGAAACCTTAGAGTTGAGAATGTCTGTTGTATGTTTAATATATTGATAGTGGATGAAGCATGAATCCAGATGGACCGAAATAATTGAATTAGATGAACAAACCAAGCACTTGCGGACCACGGTTCCAGGTACACATAAAGAAGGGACGTTTAATGGTTTATCTTTGTTCACTTGGCTTCAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 21750-19075 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 21749 33 100.0 35 ................................. CTTTTTTGGTCGGTCGTATAGTAGAAACCGCCATC 21681 33 100.0 35 ................................. AATTCATTCCCCGCGATTGCCGCCCACGTGACCGC 21613 33 100.0 35 ................................. ATCAGCTCTTGGAAGATGGGGTTTTGATTGGGATA 21545 33 100.0 35 ................................. TGCATGCAACGACCGAAGTACGTCTGTGTCTTCGG 21477 33 100.0 36 ................................. AATTTCGGATATGCGCCTTTTTCGCGGGCCAATCCA 21408 33 100.0 35 ................................. ATACAACGTGGTTTAACGAGATCGTTCAATTTGAA 21340 33 100.0 35 ................................. ACGCAAAAGTACTTAAAAAATCAGTCATGGTTATG 21272 33 100.0 35 ................................. ACTGTACCCCATCGTGGTAATCCGCGTATGAAGCG 21204 33 100.0 34 ................................. AGCAACTGGGTGAGACTCTTATTGAGCGTTGTTA 21137 33 100.0 35 ................................. TGGAGCATGTCCACACCTTGTTTACCAAGTGTAAT 21069 33 100.0 35 ................................. GCCCCTGTAAAAGCCTGGTTGGAACATGGTGGTCA 21001 33 100.0 35 ................................. TCCCATAAGAGCGGCACGCTCGCCCTGTACCGAGT 20933 33 100.0 35 ................................. GGTTCGATGTTTCCGCCTGCGTTGATCACTTCAGG 20865 33 100.0 35 ................................. GTTTCGCAGACAACGTATGACCGGGGTTTGAATAT 20797 33 100.0 35 ................................. AACGTATCGTGTATGTCTACGACTGGAACCTCTTG 20729 33 100.0 35 ................................. CTCATCACGTTGTAACATGGTGTTCTGTACGGCGA 20661 33 100.0 35 ................................. GACCAAGAACCATATAACGGTTTTGGTGAGTTGGA 20593 33 100.0 35 ................................. TGGCAGAAAGTAGAGGCCAAAACGTGCCCGGAATG 20525 33 100.0 35 ................................. AATGATCCAACCCTCACGAATTACTGCCCCTGGTT 20457 33 100.0 36 ................................. TACTGGAAGAGTAAGAGAGTATACACGTTGAGTGAC 20388 33 90.9 34 .........C......G..............G. ATAGACAACCCCGTTATGTGGGGGTATTACCATC 20321 33 84.8 35 .........CT.............A.C.....C TAGTCTTTCATGTTCGCATATGTAATGGGCACCTC 20253 32 90.9 32 ...............-........A.A...... AGGTATTGGAATGAATGAGGGAATTTGATTGG 20189 33 90.9 34 ..G......C..........T............ TATGACGGTAATCAACGATGTGATCCGGGACTAT 20122 33 93.9 35 .........C..G.................... ATGTCCGTTGGTAAAACGTAATCCTCGGAAGTCCA 20054 33 93.9 35 .........C..G.................... CAAGAGGTTGGAAAAGAGGGTCGCCGTCAGACAGA 19986 33 93.9 34 .........C..G.................... TAAATCCGTGTACACATGCAGCATGCCATTCATG 19919 33 93.9 33 .........C..G.................... CGTGAATGGACCGTCCTCCTTTATGCGGGTATG 19853 33 93.9 35 .........C..G.................... AATCAACTTTTGGTTTTCTGGCGTGTCGGCTGCAA 19785 33 93.9 33 .........C..G.................... ACGTTTTCGCTTGTTTCATTCATAAAAAGTGTT 19719 33 93.9 36 .........C..G.................... AATCCCTACTACCTTTGTCATATCCGTTTCGCTCCT 19650 33 93.9 35 .........C..G.................... GATTATCCATAAAGGGTAGGGGAATCCGGTACCAG 19582 33 93.9 35 .........C..G.................... GGCTTGAGAAGCTATTAAAGCGAGTAGACAATCCG 19514 33 93.9 35 .........C..G.................... AAACGCAAATGAAAACCAAAGCGTTAGCATTGACA 19446 33 93.9 34 .........C..G.................... AGTGAAATTGAAACGCAAAAAAGAGCCCTCCGCA 19379 33 90.9 35 .........C..G........A........... CCCTGAAAATATCGCTACCGCTGTGCCATCTGCTG 19311 33 93.9 36 .........C..G.................... TTGATTAGCGAATTGCTAAACAAAAACCTCCATAAA 19242 32 90.9 35 .........C......G..........-..... CAGTTACGTCCCCGAAGCGTCTGGCCCCTTGATAC T [19224] 19174 33 81.8 34 ........A.T..AA.........TG....... GGCAGCATCTGACATGTAAGCTCTGGTATAATTA 19107 32 78.8 0 .....-..AA.....A.....C.AA........ | T [19077] ========== ====== ====== ====== ================================= ==================================== ================== 40 33 95.7 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GGATACGATTAATGCATTCACATGTAAATGCAAAAATTCCTTGGGGTCTTTAACCACATACCCAAGCTTTATTGTTGGAAAGACAATTCGTGTGAATAAGGATAATATACTTCGATGCTCTGGAAGTAGGTGTAATGATTGCTTATTTCGGTAAGTTGTAAGCACGAGAGACATTGGGTTATCAAAGTGGTAAAAAGAGTGTAGATTACGGATAACGATTACAAAAAAATTGGTGTTTGAATGTTTACTGGAAGCTGCTAGTTTGGACGACTCAGATTCGAACTGGAATGGGAGATCCATTAATACCTGGTGCGAATGCCAAGCTCACATGATTTTCCTAGGAGATTCGCACCTCGAAAATTGTCGAAAACGTCTGGTTTGTGACCTTTTGGTAACGATTTCATGTTAAAGTGATTTGAGTAATGGACATAAAGAAGATGTAATAGCGAAAAGACGTATATATCTTCTCATTAAATAGGGGGATTACGTTGTTTTTCGCT # Right flank : GTCTAAGTCAATAGAAGCTGGACGATTGAACGGGGCAGGGTTAAATGAGTGAGTGGATTAAATCTGCGTGAATGTTTGAGAGGATCCAATGAGTCGTACGCCATATGGAGTACAATTCCAATCCCCAAAGTCTTTCCTTTCTCTAAGCGACACCCTAAAGTAGACTTGAAAAGTTATATAAGGGGGTATGTTTTTGTGCTAAAATTTAGCAAGATGACAGCAGATAAGTAAAATCATTTTCGTGTGAATTACTTCCATTACGAATAGAAGTAAATTTTTTTGCGCAAGGATTTGATATTATATAAATCTTCTGCTATATTGTAATTGTAATATGTCGCACTTCTCTGAATTGCGCGGATTGAAAATGCTAGATTGTCATTGTAAGTTTTGTTGCAAAAAGGCGCACCCTTTAAAAGGGTGCGCAAGTAATTATCAAAATTGTGAAGTATATAAATTTAGAACACAAAAGAATATACGGTTTACTATCCTATTAAGATATC # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [23-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 3 27114-26541 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 27113 33 100.0 34 ................................. TTGTAAATCTCCACGCAATCATACTTTATATCTT 27046 33 100.0 34 ................................. CATGATCGAACCGAGAACCTTTATCTCGGCCTCG 26979 33 100.0 35 ................................. CCCATACCGCTAGTTCTAGTAGCATCAGATCGTTG 26911 33 100.0 35 ................................. CAGAGCGCATCTCTAACCGCGCGGTCAACGTGCGT 26843 33 100.0 34 ................................. AGTTTCCTTTTGTGTTTGCTGTAGTAGCGACTTC 26776 33 100.0 35 ................................. CAGGATGGCAAGCTCATCAAAACGGTATACACCAG 26708 33 100.0 35 ................................. TTACCCTTGAACATTCCTTTGAGTTTGGTCATCCC 26640 33 97.0 35 ....................T............ TGGTAAACCAAGCTGATGAACTTCATGAGTGATAT 26572 32 90.9 0 ...............-........A.....T.. | ========== ====== ====== ====== ================================= =================================== ================== 9 33 98.7 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GATGAGTATGTGGAAGTAGGTGCAATGATTGCATATCTTGATTAAGTACGATGTAAACACGATAGATAGTGAGGGCAGAAGACGGCTATCTAAAGTGGCAAAGAAGTGTGTAGATCACGGACAACGTGTACAGAATTCCGTATTTGAATGTATATGGACGTTACCCAGTTTAGACGATTAAGATTTGAACTGGAAGAATTGATTGATAAGGATTCAGATAGTCTTCGATTCTATAACTTAGGTGATAAGTACAAAAGTAAAGTCCAACAGGTTGGAGCCAAAGATTCTTATGATATCGATGATCTATTAATACTCTAGCAGGTGCGAATGCCAAGCTCACATGGTTTCCCTGGGGGATTCGCACCACGAAATATGTCGAAAAGGTCTTTTTTGTGACCTTTTGGCAATGATTCTATGTCATAAGAGTTTTAAAGTAGTAGGGATATCGAAAATACGTTAATAGCTATCCTTGAAAACTAGTTTTTACGTCACTTTTCGCT # Right flank : TTGAAGTGATACCTGTACTCCCCGTACCACTGCAGGAGACAGTAGGGATGAAGGAATCTGATCAGTGGAGTCGGCTACAGTATGTGAAATGTACTTTCAAACTATCTTATCCTTTTTGGATTAATTTGTTTGTACCGATGAGATATAACCCAGACTACATATTTAGTAAATTTGCTTTATCACTTCCATTAACAATTTTGCAGAATACCAACACCTCGTCAATCCTCACGCATTAGCCGAAGTCAAGGGTATGTCATTTGCTACATTATTTTATACTCATCCACTATCTTATATGAGGAAAGTGATTCGATATGATAATGTCTTTTTAGCAAATTGGACGATTATTTATAAATGAAAAATTTAATGTTATTGGTTAGAAGCTTTTAAAAATGAATGGGAGGTAACAATGTGGCTGAGTCAAAGGGGAAAATGTACGAAGAATACATTAAATCGTTCTTTGAAAAGTGGGGAAACTCCCTAAGTATAGTGCTTTCTAAGGG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 4 34988-34147 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 34987 33 100.0 33 ................................. ACCGGGATTGATCGAATATGATCTTGAGCTGAA 34921 33 100.0 34 ................................. TTCGGCGTGCCTCCACCAGACGTGGTATCCACCT 34854 33 100.0 35 ................................. TTGTCTGTTACCTGGATGGAGAGGTCCAATAGAAT 34786 33 100.0 34 ................................. TATCCAGGAGCGCGAAGACCTCATCAAAGAGGTT 34719 33 100.0 33 ................................. ACGTCGTACAAGTCGAACGTATCGTCTATCGAG 34653 33 100.0 34 ................................. TGCGTAACCGCAAGCAAATCCGCTTGAGTGTCCG 34586 33 100.0 35 ................................. ATCTTGCCGCAATGCCCAGTGTTGACCCAAGCGCA 34518 33 100.0 34 ................................. CTTAGCCAGCCCGTTTTAATAACGGATGGTTGCA 34451 33 100.0 35 ................................. ACGCTCCAGGTGAGACGTTACCGCCGTTGTATCGA 34383 33 100.0 35 ................................. AAATCCATTTAATCCACACTCCCGTTGGTTTTTTT 34315 33 100.0 35 ................................. ACCTTCCGTATCCCGGTAGATTTGTATCCCATGTC 34247 33 100.0 35 ................................. ATCTGGAGTCAATTCAACATAAATAGATTGATCCG 34179 33 81.8 0 ...AA............A.GTA........... | ========== ====== ====== ====== ================================= =================================== ================== 13 33 98.6 34 GTCGCACTCCGTATGGAGTACGTGGATTGAAAT # Left flank : TTTTTTTTATTTCTTCTTCTGAATAGTTTAAAAGTCTACAATAATGCCAACCCTTGTTAACAAAACGATAGGGGAGCTGGCTTATTGTGAGAAAAAAAATACTTATAAAACCTGCAGGTAATCATAAACCTAACACCACAGTGCCCAACTGGGGAATTAAAAAAATATTAGACCAAAATAAAAAAGTATTGGATCTTCTCAAGAAACGAAAATGAGAAACTTGTAGGACGGGGGGATAGTTCATCCTTGATCCATTGGTAGTAATGAATTGCGAAAGGCCATGAAGTCAGCTGAAGGAGGTGCGAACCCGAAGCTCACATGAATTCCCAGGGAGATTCGCACCTCGAAATTTGTCGAAACCTTCAGTTTTATGACCTTTTGGCAACAAGGATATTGAGTTTATGTGCTGTTGTGGGATATAGTGGAGCTAATATGTGGAATAAGTATCGGAAATACGTATTAAGGGATTCTAAACATAACTTAATACGTGTATTTCCGCT # Right flank : TCTCCAAGTATGCTTCTGACAAAGCGCTGTTCTCATAATAGTCTCTGAAATTGTATTGTACCAATCTGAAATATGACATATCTAACCCCTTTGGTATTTATTAATTACCAAAGGGGTAGAATACTTTCTTTAGTTTTTAGTAACTCTTTTCTTATAGTTAAACAAAAAAAGAGAGAGCATTTTCGCTCTCTCCTATAGGATAATCTCTGCATAGCGTTAAAACATTTTATAAATCTTCCTTATGTAGTTTCCCGATAAAACCTCTTGGAACAATAATTCTATTTTTTCTTACGGGATCTTGTTTAACTTCTGACTTAAGAATCGTTGTTGGTTTGGACGTTCTGACCTGAGAAGGACTTTTTAGTCCGGCTTGTTGCCAATATTTAATCTCAACATCAAACTCATTTCTCGCGTCCGTCCTTGTTACAAAGGTAATGATCATTACCAACAATCAATATTGGTCTTGGGACATTTTTATCCTCCTGTGACTCCAGATCGAT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 5 37490-37318 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 37489 33 100.0 38 ................................. CTTGCTGACCTTGATCCCAAAGAAGTTGTTGTATTTGG 37418 33 100.0 35 ................................. CAAGCCCCTTTCCATGCTGCTGAGCGCCTTGTCAT 37350 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 3 33 100.0 37 GTCGTACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TGATGAAAAACCTCCTGAATTAGATGGAGATGATTCTTGTCAGATGATTTATACTTAGATGAAGAGATACGAGTAGTGTTTGGAACTCTTTATCAAATTGTGCCGTTTAGCCATGGAAGATTATTATGATTTTCATGACAAATGCTTTTGCTTATAAGGGAAAAGTAGGTTTGCATTATCTATTTGTTACAACATGTAAAGGCTGGTAAACTTAATAACACCGAGTATGTAGAAAGGCTTTTGGATCTGGCCTATAGAATTGGTTCAGATTGTTGAATAGGATAAAGTGTTATGTGGCGGGTGCGAACCTCAAGCTCACATGATTTCCCTGGGAGATTCGCACTTCGAGTTTGTCGAAAGTATCTTTTTCGTGACCTTTTGGCAACGATAATTTAGAATGGATGCTGATTTTCTTAATTGAATGTTGATCTTATTGAGGAAGAAAGCGGAAATACGTAGTAATGGTCTAGAAATGAAGTCTTGATACGTCTTTTTTCGCT # Right flank : ATAGACAACCCCGTTATATGGGGGAATTACCATCGTCGCACTCCGTATGGAGTATAACAATAAGAAAGATGGCACCTCCATAAGTGCCTCAGAAAACACTTTAAAGAAAAGAACTGATTATGAGTCTTCCCAGGTTGAACGCGATAAAGAAAATGGGAAAATAACAGTAACTGTCACAAGACTATCCTACATACCTATTGCAGTTTATAAAGCGTATGTCAAAATGGCCTTAACTCTAATGGATAAAGAAGATTTTAAACATTTTTCTAAAACAGTAGATTGGATAAAACAAAGTGATCACACAATAAATACGTGGTTCACAAGTCTATGCGTCTTAACTAAAACCGTACCTGGGCTACATGTGTTTCCTTACCCCCAAATAGACATATTGTTTAGACTTCCAGATGCGCCTACTGATATGCCCTATGCTTTATTAATTCTTTGCACAGTGAACCAAGTGATCCAGCTTATAGTTCCTCACAGTGATATGGAAGAAGGAT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 6 51633-50853 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 51632 33 100.0 34 ................................. TTTATGTGACGACAAACTTGGAGAACGCGAACTT 51565 33 100.0 35 ................................. TCTGAACAATCTGACATATGGCGTTCGCATTTATA 51497 33 100.0 35 ................................. CTGATGACGGAAACCCTGAAACTAAGATCCAGATT 51429 33 100.0 35 ................................. CAGTAAGCGTGGAGCCGGGGCCGCGGCCTCTGTGA 51361 33 100.0 34 ................................. ATAACTCTTGGTTCCAGTATCTGAACTGAAAGTA 51294 33 100.0 35 ................................. ACTTGCCAAGAAACGTGATGCCGCTCATGCATTAG 51226 33 100.0 35 ................................. ATGCCCTCAAAAATATCCTGATACTGTCCGGTGAT 51158 33 97.0 36 ...................A............. ACCTAGCAAGCTCGTTAAATTGCAATGGGTGTTTTA 51089 33 100.0 35 ................................. CTCTGACTGTACCAGAGCCTTGACGATAAATTCTC 51021 33 100.0 35 ................................. TTCTGAATTTGAGGGATAGTGGTGAGGCCTTGATC 50953 33 100.0 35 ................................. GACGACACAGCTGAGGGTTTCGGCGGCAGCGTATC 50885 33 97.0 0 ...............................T. | ========== ====== ====== ====== ================================= ==================================== ================== 12 33 99.5 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : AATTACAGGGTTTATTTCACATCCTTCCTGATGTTTTAAATGAGGAAAGTACGACAGTCGTTTATGAATCTCTGCTGCCACAAACAGAGGTGTCAGAGGACATAAAAAGGAAGCACTTGGAATTCGTCCAACATCGTAAAGATGCGTAGTGTAAAGTTGAATCAACTTGAATCCAGTTGCGAAGGATTCACATGATCGGTTCGAAGATATGAAATATTATGCGGTGAGGAAGTATGCTTTCTATTGTTTGGCTCGAGCGAAGCTATGTTATTAGCTATTTGGACACTGGCCAGGTAGAGGTGCGAATGCCAAGCTCACATGATTTCCCCGGGAGATTCGCACCTCGAAATTTGTCGAACACTTCAGTTTTGTGACCTTTTGGTAACAAGGATATTGAGTTTATATGTTGTTGTGGGATATAGTGGAGCTAATATGTGGAAAAAGTATCGGAATTACGTATGAAGGTATTTTAAACATAACTTGATACGTGTATCTTCGCT # Right flank : AGTTTGAATCTCAGAAAAGTTATCTTGGGCGTTTTTCGCACCCCTCTTGCATATATTGAAATCAGGAGGGATTAAGGAATTATTTGGAATTAACTCTGTATTGAGACTGTGGATTGATTTGATGAGGATCTAGGAAGCTGAACCCAGTAATCATGTCGCTCTTCGGATAGAGTTACCTTCACCCAGCCGGTGGGAATTAACCAAGGAGAATAGAAATGGGAAGGTAGTCACTATTAATAGGTAGTGTTGTTTTCGTTACTTTTTACCATTTAGTACAGCTTCAGCAGTCAATAGTAAAGTCACCTTGAAATCTTACAATTATAAGGAACAACCATAAACATGAGCCGGTTGCTAGCGTAGATCGACTGAAGGAACTGGAAGCAGAGCTCCAAGAGATGATGCACCGGTTGTTTCAAGAGAAAGAGCATACGCTTGCGGATACACAAGAAGAACTGGCGATTGTAAAAAAAGCAGTGCACATCTTTAGCAAACCAAAGAGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 7 268914-267804 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJFA01000008.1 Paenibacillus sp. BGI2013 8_340293_20.1812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 268913 33 100.0 35 ................................. TTTGAAGCTAAGATAACCGAATCTGAGAAAAAGCA 268845 33 100.0 36 ................................. AATGCCACCGTCAGCGTCATATTTCAACTCGATCGG 268776 33 100.0 34 ................................. CGTTAACCACAACTGAATATTCCCCAGAAACCTT 268709 33 100.0 34 ................................. TCTTTAATTGATGCAGGCATGGGCGAAAACGTCA 268642 33 100.0 34 ................................. ACGATTGACCTTGAAAGAGACGGGGAAGTCCTGG 268575 33 100.0 33 ................................. CCTTGTCCCATAAGGCTTTGGAGTCGTTATTAA 268509 33 100.0 35 ................................. CGTGACGTGGAGATCCTCACGGCTGCCATGATGAA 268441 33 100.0 35 ................................. GGTATACCGTTCGCCTCTGCTATCTCCGGCCAATT 268373 33 100.0 33 ................................. TTGTTTATCTTCGCGGTTAGCGGCTTTCTTTAC 268307 33 100.0 34 ................................. CACCATAGGCTGATTGTTGCCGCCGATCATGTCT 268240 33 100.0 34 ................................. CTGCAATGGTCACCCCGGTAAGAACACTAGCAGC 268173 33 100.0 34 ................................. TTGATGGGGTTGGACGGCACACCGTCGGCTATCA 268106 33 100.0 34 ................................. CGCGATGTAGCCGCTGAGACGGTCACAGAAGCCG 268039 33 100.0 34 ................................. CATTGTCCCGTACCCCTCCCAAAATCTACTAAAT 267972 33 100.0 35 ................................. GCTGTTGCATGAAGGCTGCCCCCTTAATTTATACC 267904 33 93.9 35 .........C...C................... ACGCGACATTCGTTTATCCCCCTATCAACTTTTGA 267836 33 97.0 0 .........C....................... | ========== ====== ====== ====== ================================= ==================================== ================== 17 33 99.5 34 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AAAAGTGACGTAGATATACGATACGCACGTAAATGTTGATCAAAAGAGAAGCGCTATGGCAATCGTAAATGTTCCCTTGAACGCAATTGGGGCAGGCCAGCCATAAATAGGTTGATGCATGCATGAGATTTGCTTTATGCGCTTTGATTTTTGGTATAATGGAAGTGTATAGAGATTTGAGTGGCTGTTATGGAATTTCTTGATCCCCGAGTAGATTTTGTATTTAAAGTATCTTTAGCGTTAAAAATACCATTTTAAATCGAGTCCTAACTAAAGTGAGATCCACTACTTAAAGAGATCATTTTAACAGGTGCGAATGCCAAGTTCACATGATTTCCCTGGGGGATTCGCACCTCGAAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATAGTTGAAAGTTTGTGATAACCGGTTTAAAGTAGTGGAAATATCGGAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : ACCGAAATGCCCTGGCTGATCTTTTGACATCACCGTCGCACTCCGTTTGGAGTCAACCATCAGTTGCTTTATGTTTAGAGAGTATCCAAACTTTTATTGTTGCTGTTGTACCATTAAGAGATAGCCCTTATGCTACAGCCAAAGTCGATCCTTCAATGGATCGGCTTTATTTTATTGGAGCAATTTAGCGAGTAGAAGATGGAAGAAGATGCACATTCGACCCAACAAGCAGCCCAATTATTTGCTTCATTACAGCAAGGTTTAAAATGAGTCGCACAAAGAGTAGCTTTTTCTTTTACTCACAAAAAAAAGGAAACGAGAATGAACATCAGAATCGTGCCAATGCGCAGATTAATGTAACAGCCTATCCCGGGTAGACCTTCAGCCAGGCGATCTTGAGTATGAGAAGCTTCGCCTGGTATTGAACAGATTGGGTATGTGGAACCTGTCGTCTGGAATAAACAAGCGGGGAAGAAAGTCGGGCAGTAATCAGTGCACTG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //