Array 1 249209-251858 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBKY010000002.1 Klebsiella pneumoniae strain QU-20 K.pneumoniae20_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 249209 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 249270 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 249331 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 249392 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 249454 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 249515 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 249576 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 249637 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 249698 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 249759 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 249820 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 249881 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 249942 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 250003 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 250064 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 250125 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 250186 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 250247 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 250308 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 250369 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 250430 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 250491 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 250552 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 250613 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 250674 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250735 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 250796 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250857 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250918 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250979 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251040 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 251101 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251162 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251223 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251284 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251345 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251406 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251467 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251528 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251589 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251650 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251711 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251772 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 251830 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //