Array 1 629638-632538 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIEN010000001.1 Chelatococcus caeni strain DSM 103737 Ga0373271_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 629638 32 100.0 36 ................................ GGCTTCGTCGTCAGCCAGACGTCGCATGTCGAGGTC 629706 32 100.0 34 ................................ ACATCGAGGCCGCCGCGCATATGGAAGGGGACGG 629772 32 100.0 33 ................................ AAGATCGTCATCGATCGCGCCGACCTCTTGAAG 629837 32 96.9 34 ..............................C. CCCCCCTATAGTCCCCCCCAAGGGGGACGAGAGA 629903 32 100.0 37 ................................ CTCATCCTGCAGGTTGCGGACGATGGAGAGCGAGCCG 629972 32 100.0 34 ................................ CTCCACCATGCGGCGCATCTCGGCATCCACGATG 630038 32 100.0 35 ................................ ATCTCCGCACCTTTGGCTTGGTGACAATCGCGTAG 630105 32 100.0 40 ................................ CAGGCCATCGAGCTGCGCCCGGTGGACGCCGGCATCCTGG 630177 32 100.0 35 ................................ GTCAGGGCGCCGTTGAGCGCCCGCGTCGTTCCCTC 630244 32 100.0 34 ................................ CTTAAGCCACCACGCCGCCCAACCCTTGGCCGAG 630310 32 100.0 34 ................................ GGTACCACCTCCTCCGGCTCAATGCTGATGTCGA 630376 32 100.0 35 ................................ TGGAAGACGGCCGGCTCGTGTGGGGCTGGGGCGGG 630443 32 100.0 34 ................................ CGTGCTGGCGTTCGGGTCCGGCGCTGCGGCGGCC 630509 32 100.0 33 ................................ TGCACGTGCCACGCCAGAAGCATCTGCTTGAAG 630574 32 100.0 34 ................................ ATGAGGATGGCCCGCTGCACCACGTTGGTGGCGT 630640 32 100.0 35 ................................ TTCACCTGCCGGATGGAGGTGCGGGCTCCGGGGGT 630707 32 100.0 34 ................................ TCAGAGAACCGGCGAACGGTGATGTCGGGGAACT 630773 32 100.0 35 ................................ GCCGCCGGCAAAGCCGCCCAGGCCGCCAAGCAGGA 630840 32 100.0 36 ................................ GCGCCAAAGCCGTCGATCCCGATGCGCACAGTGGTC 630908 32 100.0 34 ................................ GGCTACTTGTCGCCGTGCTACTGGATCAAAGACC 630974 32 100.0 34 ................................ AGCGTGATCGCCGGCCGCTCGCCCGTATCCGGCT 631040 32 100.0 35 ................................ TCCCGCAAGCCGCTGGCCCAGATCCTCGCCGAGGT 631107 32 100.0 33 ................................ CCAAGCCGGCCGGTGTCGTCTCGTGCTGATGTG 631172 32 100.0 35 ................................ ATCTTGCTACCCTCCCTCACGCCGCTGCCACGCTG 631239 32 100.0 35 ................................ GGGTTGTCCTTCGAGAACACGAAGGCGTAGACCTG 631306 32 100.0 33 ................................ TGGCCCAGGATGGCCAAGGGAGCGTACATCGTC 631371 32 100.0 34 ................................ CCTACGATGGTGGAGACGGGCTCGCGCATGTCGT 631437 32 100.0 36 ................................ CCGTCTTGAATAAATGCCCTAATATTCCCCGACCCG 631505 32 100.0 34 ................................ CCCGGCGATCCGGCGAAGGCGCTCAGGGCCTGCG 631571 32 100.0 34 ................................ GCCCTCGGACTCGCTCCGGAGCAGGTGCTTGAGG 631637 32 100.0 35 ................................ TGCTCGGTGAGCATGTAGCGCTCGCCGATGACGAA 631704 32 100.0 35 ................................ CCGAAAGTGGGCCAACCCCTGAGGCCCTTGAGGAA 631771 32 100.0 34 ................................ CGGCGCCCTGCAGGATGACACGCTGAAGTCCCAC 631837 32 100.0 34 ................................ TCAAGCGCGTCGCGCTCCTCAAGCCAGCCTTCGG 631903 32 100.0 35 ................................ TCCTCCTCGCCGCTCTTCTCGCGGCCCTCTCCGCA 631970 32 100.0 34 ................................ TTAAGAAGCGGCTAGAGGCGGTCCTGCTGCGCCG 632036 32 100.0 34 ................................ AACCAGGCCACCGACGAGAAGACGGAATGGGTGA 632102 32 100.0 34 ................................ TTGATGCCGGCGGCCTTGTCGGCCATCTCAAGCT 632168 32 100.0 35 ................................ GAGGCGAGCGGAGCCGGCCCGCCTGCGATGGCCCG 632235 32 100.0 36 ................................ TTCCAGGACCGCCTCGCCATGGGTGGCTTCGCGGCG 632303 32 100.0 36 ................................ AGGAAGCACCTCCCCAAGGTCGAGAAGCCGAACGTC G [632322] 632372 32 100.0 35 ................................ TCCAGCTTGGCGCGCCGGCGCTCGTCGATCGGATG G [632391] 632440 32 96.9 34 ........................A....... CTGATGGACGAATACGTGAAGGTCGACCGTGCCC 632506 32 78.1 0 ...T.............AA..C..A.C....T | T [632517] ========== ====== ====== ====== ================================ ======================================== ================== 44 32 99.4 35 GTCGCTCCCCATGCGGGGGCGTGGGTTGAAAC # Left flank : GAGAACGCAACGGACAGGACGGCAGGGCGCCGCTGCGGATCGTTTACAGGAGCACGGGGCGAGGACCGTGCCGAGCCTGTGCGACGGTGGCGGCGCACAGCAATAGGCTCGATGTCCATCGGCGAGATGCGATGCGGCTCCGACTCGGCCGGCCGTTGAAAAGCGCCCCGACGACGCAAGCGCCTCCGGAGCATGGCTATCTGCGCCAGCATCATCGCAGCCTGCCGGCCGCGGAGAGCGACCAGAGCGAGGTCAGCGAAGGCTCCGGCCCTCCAGCCCGGGACCTGCGCTCGGGGCCCAAGGCACAGTCAACCCACCGAGGCGCGAACCGCAAGCGTGCCGGAAAAGCCCGCCCTGTTCGCACACGGCCCAGCTCCTTGATATCGTTGGGCTAATCGCCGCCGCCCGCGACGATCCTCCGCCGGCGCGCCGGCGGAAGAGCCCGCTTCGCGATCCGAACCCCGTTTTGCTCGTTGCCGCAATCAGGTAAGAGCAAGGGC # Right flank : TTTGGGCCGGTCTGCGGAGCATCCGCAGGCCGGCTGCACTCCCGCGTGGGCGTATGCCGTCATCCAGACGAGGAGCTTGGACAGGCGGCTCGGGGTCGTCCCGAACTTGCCAGCTTCATGAAAAACGGGCTTCGATGCCGGAAAGTCGCTTCAAAGCCTGCTTTGATGTGGCGCGCCGCTATGCAAGCCGGCTTTCATAGCGAGGATCGGGCGCCCGGAGCGGGAAGGGAGCGCCGCTGTGCCGGCATCCGTGCCGACGAGTGGTGCCTCGTCTTCCCTGTTCGTTCGCGACCTGCGCGAGCGAACGGGCTCCGCAGGCGGACATCAAAGCGTTGATTTTCTTGGATTTCCGCGGAGACGAGGGGATTCGAACCCCTGATACGTGTTACCACGTATAACGGTTTAGCAAACCGCCGCCTTCAGCCACTCGGCCACGTCTCCTGCGGCGGCCAAGCCCTAACCTTTTCGCGGATTCCGGTCAACATGCCAGTTGGGTCATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGGGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 597374-596048 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIEN010000003.1 Chelatococcus caeni strain DSM 103737 Ga0373271_03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 597373 33 100.0 35 ................................. GCCTATCGCCCGGTGACGATCGACCATCCATCCGA 597305 33 100.0 34 ................................. AGGAGACGGAAGCCCGGATCCGCGAGGTTGAAGG 597238 33 100.0 37 ................................. TCCTCCAAGTACAGGGCAGCGATCTGCGAGCGGCACG 597168 33 100.0 33 ................................. GGTCGCGCGGTCATGGCGATGCCATCTGCATCC 597102 33 100.0 36 ................................. ACCATCACGCCCCCTCCCCCGAAAGCGCCGGAGCGG 597033 33 100.0 35 ................................. CCCCGGCCGCGGTCCGGCCCCTCTTTCCTCCCCGA 596965 33 100.0 35 ................................. GATCAAGCGGCAGGAGATCGATCCGGCCACCTGGA 596897 33 100.0 37 ................................. GGGTGAACCTGAGCCAGCGAGGTGCCAGCACACGACT 596827 33 100.0 35 ................................. TTCATAGCTCGGTCTCCGTTGCTGTCGACCGAGCG 596759 33 100.0 35 ................................. TTGCCCCACTTGCGGGCACCCCCGAGGAGCTTGAC 596691 33 100.0 34 ................................. GTGCGATCTCGCACGTGCGATGACGGAAGCGGCG 596624 33 100.0 35 ................................. ACCTTCTTCGCCATGATCGGCTCCTCACCCGGCAA 596556 33 100.0 35 ................................. AGGAAGGCGGCGTAGCTCGTGACGTCCGGCCAGTC 596488 33 100.0 36 ................................. TACGCCATGAAGGGTGTGGCCAGCGGCCTCGGCCCG 596419 33 100.0 35 ................................. AGTGAACCGGCTCGTCGCCGGGGCGTAGTAGCGGA 596351 33 100.0 36 ................................. CGTCAGCCTCGTCATCGTCCCGCCTCCGTGGGTGCG G [596337] 596281 33 100.0 34 ................................. CACGTCGTCTTGTCCTTGGCGGTGCCGATGGACG 596214 33 100.0 34 ................................. GGCGCAGGCATGGCTACTGGAGCGATGGTGTTCT 596147 32 97.0 36 ...................-............. CTCGTCTGGCGTTCCGGCCGCTCGGCGCCGGCCGCG 596079 32 87.9 0 .................A.T-...C........ | ========== ====== ====== ====== ================================= ===================================== ================== 20 33 99.2 35 GTCGCTCCCCGTACGGGGGGCGCGGGTTGAAAC # Left flank : ACCTATGACGTGAACACGTCGGATCAAGGCGGGGCAGGGCGGCTTCGGCGCGTGGCGCGCGCCTGCCGCGATTTCGGCCAGCGGGTGCAATATTCCGTCTTCGAGATCAACGTCGATCCGGCGCAGTGGACGCTGCTGAAAGCGCGCCTCGAAAAACTCATCGCGCCCGAGCGCGACAGCCTGCGCTATTATTACCTCGGCGCCAACTGGCAGCGACGCGTCGAACACGTCGGGGCCAAGCCGGCGACAGACCTCGAAGGCCCCTTAATCGTCTAGCTGGGAGCCGGTTTCTGCCGCGAGGCGCAACCGCCGCGCAGGCAGGGTGCGAACCGCAAGCGTGCCGGCGATCCCCGTCCGGTTCGCACATTGGACAATTCTTTGACATTGTTGATCTCTTTCTGCCTGCGGCGCGGGCGTGCCGGCCGCCTCGCCGGCGGCGGGCCGCGTTTCGTGGTCTGCGCCCGGTTTTGCTCGTTGTCGCAATCAGATAAGAACGATGG # Right flank : ATGTAAGGCATGTACCAGTCTTACTGCTCGCCGCTGTGCCGCCCTGCGGGGGGCGATCGTGGCCGGACGCCCTGGCGCGCTTCGGAGCGGACATTATGGAAGTGCGCGTCAAGGCCCTTCCCGGCGAGGCGTCCGGCGGCGACGGGGGGGCGATCTGACGGCCGTGGTCTCAAGCAGAGCCGCTGCTCAGGACGATATGTGAAAAATTTTAACTAAAACTGTGCTGGATCGAAGACGTTTCGAAGCGATTTCTTTAGATTTTAATTGATTCGTTACCCGGGATGAGTAGAGTGCCCCTGCTTTTGCACTGGGGGGTAGTGATGCGTGCATTTCGCACTTCGATTTCCATTCTGGCTCTCGCCGTCGCCGGCCCGGTCCTTGCGGCCGACCTGCCGTCGCGGCAGATGGCCCCGATCGTGCCCGTCGGGCCGATCTTCACCTGGACCGGCTTCTATGCCGGTGTGAACGCCGGCGGCGCGTGGGAGCATGGCTCTCTTCAC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTACGGGGGGCGCGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //