Array 1 10421-14911 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDJX01000008.1 Lactobacillus delbrueckii subsp. bulgaricus strain YNF-5 Scaffold8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 10421 28 100.0 33 ............................ CGTGGACTGTGTGATCATGGTCCGGCCGACCAT 10482 28 100.0 33 ............................ TGGCTTAATCTACAACGAAGATACGGCCAAGCG 10543 28 100.0 33 ............................ CCACGCTTGAGAACTCAATGGTTACTGAGTTTT 10604 28 100.0 33 ............................ CTATGGCCTTGATGAAAAAGAAGCCGATGAATG 10665 28 100.0 33 ............................ TGATGGAACAAGATATCTGTTTGCGTCACGACG 10726 28 100.0 33 ............................ TAAGCCAGCGCGTGGTGGGCTTCATCGATCAAA 10787 28 100.0 33 ............................ TTCCTCTGCGCTCCCCGGTTGGGTTTTAAAGCT 10848 28 100.0 33 ............................ CATATCGGGTAAGGCCAACTAGTCAAGTTAAGA 10909 28 100.0 33 ............................ TAAGTATCAAGATAAAATTTACTGTAATTCCGG 10970 28 100.0 33 ............................ TCAATACTACTCGATGTACGGGATCCGTTGGCA 11031 28 100.0 33 ............................ TAATCTAGCACTAACTCTTTGTTTAATTATTTT 11092 28 100.0 33 ............................ TATCGGATTCTCTCATGATTTTAAATGCCCCAT 11153 28 100.0 34 ............................ TAACAACTTGACCACGATCAAGGCTCTTGACCAA 11215 28 100.0 33 ............................ TACAGGCGAATCAAGACAGCAATCAGAAAGGCA 11276 28 100.0 33 ............................ CGGAGAATGGTGTAACGGCGTGGATTTACGGTG 11337 28 100.0 33 ............................ TTTACCTTTGAATTTTTCCGTTGATAAGACTTC 11398 28 100.0 33 ............................ TAAGAGTCCAAGTGTATTGGGTTGGATCGGTGC 11459 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAATATTGCCAA 11520 28 100.0 33 ............................ TTGTTCTGACGCCGTGACGTAAGCAGATGTCCT 11581 28 100.0 33 ............................ TCAGAGACACCACTGCGTTGACGGTTTCGCCGG 11642 28 100.0 33 ............................ TTCTTGATCTCTGCCTTAGCTTGGTCGACCGTG 11703 28 100.0 33 ............................ CATCGCCAGCTACCTGGCAGCTGAAGAGTCAGA 11764 28 100.0 33 ............................ CTTAACGGCCATGACATTGAGAAGGCCAAGGGG 11825 28 100.0 33 ............................ CTCTGCTGTCAAGGAAGCTCTGGCCAACGCTCA 11886 28 100.0 33 ............................ CTTTTGGAATGCCGGTCTTGCCCGCCCACTGAT 11947 28 100.0 33 ............................ CAGCAAGGCTACTGTCAAGACTATCTTAGGTAC 12008 28 100.0 33 ............................ TTTCCTGATTAACAAATTCGTTGGCTTAAACGA 12069 28 100.0 33 ............................ AGTACTACTGGACAGTAGAAGATGGACAGGTGG 12130 28 100.0 33 ............................ TGGCTGCCGAAGTAGTCATAGTCGATGCATCCT 12191 28 100.0 33 ............................ AATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 12252 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 12313 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 12374 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 12435 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 12496 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 12557 28 82.1 43 ......................NA.GTG GGGGTGATCCAATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 12628 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 12689 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 12750 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 12811 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 12872 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 12933 28 100.0 33 ............................ TTGAAGAACTGGAGTTGTGAGAAAATGCAAAGT 12994 28 100.0 33 ............................ CTCAATGGTGGCCCAGGTTGGGCCAATTGTGAC 13055 28 100.0 33 ............................ TTTACTCTGGCGCATCCCTGCTGCGGACGGCTA 13116 28 100.0 33 ............................ TCGCAGCCCAGGCCCGGGCTCTCTTGGCTTCTG 13177 28 100.0 33 ............................ TCGTTGCGCCTTTTTTGTAGATCCCGCCTTTTA 13238 28 100.0 31 ............................ CTTACTTTTTGTAAGCAAAAAAGCTAACCTG 13297 28 100.0 33 ............................ TCTAGCAAGCTTTCAAGCTTGCAAACACAATTA 13358 28 100.0 33 ............................ TTCCCATGAGTTCATGAGAATAGATGGAATTGA 13419 28 100.0 33 ............................ CGTGTTTAAGGCGTCTATGCATGATTGCCTTTA 13480 28 100.0 33 ............................ CGCCTTACTAGATAGTAGTAATAACATAATTCA 13541 28 100.0 33 ............................ CTAATGAAAATGAGTTGATTTCTCTCAAGTCTG 13602 28 100.0 33 ............................ TTAGTTTGATTCGGGCTGAATTGAAAGCACCAA 13663 28 100.0 33 ............................ TCACCGATTTTTCCGGAGATACGCATAAAGACC 13724 28 100.0 33 ............................ TTGTCATTGTGAATCAGTACACCGAGACCATCA 13785 28 100.0 33 ............................ TGGCCGTGCCGCCATTTACGGTGTCCCACAGTT 13846 28 100.0 33 ............................ CTTGACACCGTTTTTTAGTAGCAAGCCCGGGGA 13907 28 100.0 33 ............................ TTAAGAAGTTTTTTTATTTTTTCTTTTCGGCTA 13968 28 100.0 33 ............................ TTTCAGTTTGCGAAATATCGAACACGCAAACCG 14029 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 14090 28 100.0 33 ............................ CTTCAGTTTGCGAAATATCGAACACGCAAACCG 14151 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 14212 28 100.0 33 ............................ GAAGGGTGAGACCAACGCACTGGCAAGATGTGG 14273 28 100.0 33 ............................ TCAAAGTTAGGGTTACGGCGCCAGGCCTTAAGC 14334 28 100.0 33 ............................ TCACTGGAAATGGAGGATTAGATGGCGAAAACA 14395 28 100.0 33 ............................ TCACCAAGAAGAAAAGCTTGTAGAGGGCTTATA 14456 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 14517 28 100.0 33 ............................ CTGCTAACACTGCAGACTTACATGATCTGCTGG 14578 28 100.0 33 ............................ TGATCAGAACTAGAATCTACCCGGTTACGGGCT 14639 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 14700 28 100.0 33 ............................ CTGCTGAATGAACTCATCAACCGTGATGCTGCT 14761 28 100.0 33 ............................ CTCAGACTATTCTACTTCAGACTTCATCTATAC G [14783] 14823 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 14884 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ =========================================== ================== 74 28 99.6 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGTGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGAATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGACAAACGGCTACCGGTCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //