Array 1 25338-24859 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIP01000144.1 Microcystis sp. T1-4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 25337 36 97.2 39 ............C....................... GGCAACTAATAATACTCAATAAAACGCAGCAGTATTGTC 25262 36 100.0 42 .................................... CTAAAATTATAGGGTAAGGTCTAAGACGATTCTGTTACAAAT 25184 36 94.4 32 .......................CT........... GTAGGGTTAATTCATGAATTAACCCTACAAAT 25116 36 100.0 37 .................................... GTTCATTAAGAAAAAACACAAACATATTAGGAGTACA 25043 36 97.2 37 ........................T........... GAAAAGCCTCTAAATACCGGTTCGCCCTCGACCTTAT 24970 36 83.3 39 C...........C............ATA..C..... GTCGGGCAGTTGAAAACTTGAAGTCGGGAGAATCCATTT 24895 36 83.3 0 ............C........T..T.A.TA...... | C [24873] ========== ====== ====== ====== ==================================== ========================================== ================== 7 36 93.6 38 GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Left flank : GACGGCCGCAAGGAGCCTAATACAGTTCAACTGTAACAAAACTCGCTCGTTTCTTACCTAGACCTTTGCCAGTCCGATAAGTGTCTTTCAGTAAACTGCCTCGACCCGCTGCGAGCGATTGTCTGATAGTTTCTTCCGCCAAATAATCCTAAAAGTGTCGCCCAGTAAGCATTTTACTATAGCTTTTTTCAGTCTGCTGAGGTACAAAATTTCTGGGTTTTAGGCAAAGGGGAAGAAAAATAGCTGTACCTCACTAGCTTAGGAAACGCCATATATAAGTACCTAAGCAAAATTAATTACACATCCAAATCGTCAGCAGTTACTCCGTCAGCTTTTTGCTGTGATCAGTAAACAGTGAACTAAAAACTCAAATCTGATCCCGTCTCCTGTCTCCTGTCTCCTGTCTCGACTGGGAAATTAATTTTGCACGACTACTTATTTAGGGTTTCCGGCAAAAAGTTTAAAGAAGATTTAATCGCACTGGTGGGAGTCGAGATTTT # Right flank : TGGGGTTAATGTAACATTACTATAAATATCTTGTCAAGTTTCTATTCAATCATCCTATAAAGTCGCCCTAAAAGGGCGAGGCTTTAAACCCAATTTTTCGGTAAATCAGCCATATAAACCGCCAAAATCTCCAGACTGTGGTAGATCGAGGGATTTTACCAGAAACCGAGGTTGTCTGCTCCCAACACTATCCAAAGCTAATAATAATCATATAAAAAAATCTATACCACCAGAAACTTAGACAGGATCAGCTTTTGAAGCTTTTTAAAAAAAATCTTCAAAATATCGTGTTATCTCTAGCGGTTCCTAGGGCATATTGAATATAGTGGGAACATCGGTCAGCAAGGAGTTGAGGCGTTTATGGCTCTAGGATACTGGCAAGCGAAAATCTGGGGATTACTACACGATCCCGTCTTCAAGGCCCTACATAGCAACTCAGGACGCGGTGATAACAGCTTCTGGAGAGATTTAGAAGTAATGAAGTTGTGGGGAAAACATAA # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 1450-88 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIP01000051.1 Microcystis sp. T1-4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================= ================== 1449 35 100.0 34 ................................... CAGAATGGATAGTTAACCAACTCATTAAAATCTC 1380 35 100.0 33 ................................... TCAGTGCTTGCTTTTTCTGTTCTGCTTCTGTTT 1312 35 100.0 36 ................................... GGGAGAGGTGGTGGGAATGTTAAAACATTCTTCCTT 1241 35 100.0 39 ................................... GACCATCTTCCTGAATGACGCCAAGAGGACATCAAATGT 1167 35 100.0 44 ................................... ATCCCAAATGGCATTATCGATTCGATGTGCCAGTTTTTGGTTGT 1088 35 100.0 38 ................................... GGTTCGACCAACCGCTCATGAATGGTCATAAGCCGGAT 1015 35 100.0 37 ................................... ACTTTGTTTTGAATGACTACGAACGGGTCTACTCCAT 943 35 100.0 42 ................................... CTTTAAATGGCAGCATGATTTCTATTTAATATTGAAACTAAT 866 35 100.0 38 ................................... AGTCGGTAGTTCCAGACTGGAACATCCTTAAAGGGACC 793 35 100.0 32 ................................... AAGAAATAATTTGGTATTGAATTTTTGAATTT 726 35 100.0 49 ................................... GGAGCTATGGGAGGCTCCTCGCAAGCACCAAGGGGTGCAAAAAAAACTA 642 35 100.0 37 ................................... ACATAAGGCCAAGAATGCATCAATCTGTGATGCGTTT 570 35 100.0 41 ................................... TGGGGGGGAGCAGGGGAAGGAGAAGGAATGTTAATTTTAAA 494 35 100.0 40 ................................... TGCAAGAGCCCCTAAGATCAGATCGCCGAAGAAAATTCCA 419 35 100.0 35 ................................... TATTTTGTTAACTCATTTATTATAGTCGCAATCTC 349 35 100.0 40 ................................... GGGACTCCCTCATACTGCCATAAAGAATGATCTCTACCTG 274 35 100.0 42 ................................... CTTTTTAAGCTTTCGCTTTAGCTTTAGCTTTCGCCTTAGCTT 197 35 100.0 41 ................................... CATCCAACGGAGTAGGGGCAATTCATGAATTGCCCCTACTG 121 34 82.9 0 ...........................G-..TCTG | ========== ====== ====== ====== =================================== ================================================= ================== 19 35 99.1 39 CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Left flank : TATCTGAAGAAAAATCGGAGTGCTGATGCGAACACCGAAAGGATGATGAGAGATCAACCCTGAGCAACAAATACAGAGCTACCAGAGTCTGCTGCTATTAAGGTAAAGCAACTAAAATATCGGGAGCATCTCATTTATGCAAGTGAGTAATTATACTTGTCCTAACACTGATTTCTAGCAAGGCTTTCAAAATAGCTTGACATAAAGATTTAGGGGTTATAAAGGTGAGATGCTCCCGATCGCATAGGCATTAACGTGGAACAAATTCTATTGTTTTATGCCGATGGAATGGGGGGGTTCTCAACATTTTTCGCGGGTTAGACACAATGCCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGGCCAGCAAGACTTTGAGCCTTATGACTGAGGTAACTATTGAGAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATTGCTGTACAATCCTTATACAGCCTAGTTTTGCCAAGCTAGT # Right flank : GCTGAAAAAGTAGGGGCGAAGCATTCGGGCAATAACCTATCGGTGAAACCGGAGATTTTCTATCCGAATGCTTCGCCCCTACAGGACA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 408-1395 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIP01000442.1 Microcystis sp. T1-4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 408 36 100.0 33 .................................... CAGAGGCACCATTTACGTGGGGACCGTGACTAT 477 36 100.0 37 .................................... CGCAGTGGAACCAGTTCTTTGTTCAAATCCTCCACCT 550 36 100.0 34 .................................... AACTTTTCATCAATCCCATCAGCCTTTACATTGT 620 36 100.0 35 .................................... CTTCTTGATGGGGACATCGGTCTTCAACATATCTA 691 36 100.0 37 .................................... TTCAATTAATTTCTGGTTTTCCGAAACTTCAGGAGCA 764 36 100.0 42 .................................... TGGTATAAAGCCACCATCATAAATTGAGACATATCATTAATG 842 36 100.0 41 .................................... CTGCTTTTGCAAAGACTCTTGCTCTGCCACAAGAGGCATTG 919 36 97.2 39 ...............................A.... TTTTCCATCTTGATAATCGGTTATCGGTTCTGATAATCT 994 36 97.2 36 ..............C..................... TCCAGGGATTTTATCTTCCCCACCAAAATTTATCTG 1066 36 100.0 38 .................................... AATTTTTCTACCAAGAACTGCATAAGCTCTTCAGAAAA 1140 36 97.2 37 G................................... TGCTCAACACTTCCCCGCTAGGATGATGCACAGTGTA 1213 36 100.0 36 .................................... ATTTGCTTCATGGTCATCCCCCCTGTCGTATCCTGA 1285 36 100.0 39 .................................... GTTAGAGTCATTTTATCCACGGAATCGTATGTTGACTCA 1360 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 14 36 99.4 37 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Left flank : ACAGATAATTACTTAAGCAAAATTAATTACACATCCAGAGGCGGAAACTGTACGCTAAAGTAGTAGAAAGGGTCAATCCTCAAGAGGATGATGTGCGCTTCTATGGGATTTCCGAAGAAGCTGTCTCTAGATTGTTGGTGATGGGAGGTTCTCCTCCTCAACTACCCCCAAATCTCTACATCATCTAGCTTGTCCCCCAACTCTTGACTGAAAATCGATGCACCCCCTCCCCGACCTAAAACCCCGATTCTCTGGTTGAGGTGCGTCGATTGCTCTCCCAGTCAGGGTTCTACCCTTTGGTATCGGGACTTTTACCCCCCCCGGAACCACTTTTTAACCCTCTTTTTGCAGGTGCGTCGATTTGGGGGTCTGTCTTCCCCTCTCGATGAGACTTTCCAAGGGGTACTC # Right flank : CTAGAAAAAGGGTTTCTTTATAAACCCTTTTTCTGCCTTTCAATTTTGTCGAAATATCTATAAGTAGGTGGGTGGAATTAAATATAAAATGAACGTAGGTTGGGTTGAAGCATGAAACCCAACGCCCGCATGGGTTACGCTACCGCTAACCCATCCTACAAATAATTGTGCCTACCTACTTAGGACATTCTGGGCGCACGCGATGCGCCCCTACCATTGGCACAATAATAATATTATTATTGTAGGGGCGAATTGCATTCGCCCTCTTTAATTGGAAACCCTTTTTCTAATAAATTCTATCAAATATATCTTGACAAAAATCGATAAAAATGCTACAATTAGGCGTGATTGTTCGCTAAAACTGGAAACATGGTTAAGACAGTAATATGTTCATCAATCCGTTAGGATTCCTAACAATAAAAAGTCATGACAGTCTTAGAAATGCTCACCGTTCCCTTTTGCTCTCCCCTTGCTGGCAGCCTTGGCGAATAGATAATTAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //