Array 1 224844-224614 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPI010000002.1 Anaerostipes caccae strain DFI.1.222 BBIJEEHG_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 224843 30 100.0 37 .............................. CACATGAATTTCGGTCGTGCACATAAATTACGGCACC 224776 30 96.7 37 .....................C........ GAAGAAACTGTTGTTCCGGTAGAAGAATTTAATCTTA 224709 30 100.0 36 .............................. TGATGAATTACTACACCTCCAATAATACTTGATTCC 224643 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 99.2 37 GATAAACAAAAACAAGAGTTGTATTGAAAT # Left flank : AAAAGCCAGGCGGTGGTTTTGATTGGGGTGACTTATCAGCAAAGAGGACTGAATGAGTGCTGTGGTTGGTGTAATCAGACAAACTGCCAGGGCTGCAGGGAGAACCAGAGCGTCTGTGTATTTGATCCGGTGGATCTGGGAATCGCATTGGGATCGGCAGTCAGTGTGGCATCCTTAAACCACGTGGACAATCGGATCATGTTTTCTGTTGGAAAAGGAGCACTATCCTTGGGGATGCTGGGACCGGAAGTGAAGATAATCCTTGGAATTCCGTTGGCTGCTGCGGGAAAAGCGCCATATTTTGACCGTAAATAACGGTGTAGTTTTCCCAACCGGCTAAATTTAAAAAGTGGTCCAAAACGTTGATTTTACAGGGGCTGCAGAGGATTTTTAGGATTAGTTTTGAAAATGGACGGCCGGTTGGGAAAAAAGCTGGAAAACGTTGAATATATCTAGGTTTAGAGATATAATGGAAACTGAAGAATGGCTTAAAAACGTTG # Right flank : ACACTTACCTCCTCTTTTGTCAAAGGACGTCCACAGATAAATAAAAATAAAATGAATAATAGATTGCTTATCTTAATTTGAATTGTTTGAAAGTACTATGAAATGTTGTATTATTTTGAAAAATATAGTAAAATAGAACAATAGAGTGGTTTGTGTATAAAAGCTACTAATGAATCATTCCCTCCAGGGCAGTCGTTACGATAGGTACTATCAGCATGTATACGATACGAGGGTGCATACAAAAGAAAGGGGTGGGGCAGTGGATTTACAAGTTTTTGAAATCCGGCTAAAAGTATATCTGTTAGAAGATATCCCTGTAGAAGCAGTTCAAAAGAAGACAGCCGCACTGATTGACATTTGTCTGAGCAGAGACGAAGCACTTCTGAAATTTCATGAGACGAATCAATTTAAGAATTATTCTTTCGGAAATCCATATCCATTGGAAAAGGACAAAATTTATAAAAAGGATAAGGTGTATGTCATAACAATCCGCACCATTG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 564129-562904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPI010000001.1 Anaerostipes caccae strain DFI.1.222 BBIJEEHG_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 564128 32 100.0 34 ................................ TTACCGACTGCTTACTGGGTAAACGGAGATACAG 564062 32 100.0 35 ................................ CTCTTGGAATGGCTTTAGGAATTGAGAAAAACGCC 563995 32 100.0 34 ................................ GTGTAAAATTTATGTTCGCACTCCAGACATTTTC 563929 32 100.0 34 ................................ TTTAAGACGGTGTGACATATCCTCAAAATACAGT 563863 32 100.0 35 ................................ TGTTTATACCAGGAGTAAATATCATTACTTTGCTT 563796 32 100.0 35 ................................ AGGTCGGGTTTGGTGATGTCGCAAAAACATACACC 563729 32 100.0 34 ................................ ATAAGAGAAGACTTAGGATTATCTCAAGCAGGCC 563663 32 100.0 34 ................................ GTAAAATCTCCTGTCCAGGCTAAAATGTCTTGGT 563597 32 100.0 35 ................................ GCCACTGTTGCGAAAGAGGCAGACGTAGACGAATA 563530 32 100.0 34 ................................ CTGTCAATACAAAGGATTTAATACAGATCCATGG 563464 32 100.0 34 ................................ GTGCACATCGTTAGCAATACTTTGTCTTTACTAC 563398 32 100.0 34 ................................ TCCGCTATAGAAAAGGAGGCAAGTATGCAGAAAG 563332 32 100.0 34 ................................ ATAGATATTTTGTTTAAACCGGTCTGTTGTGATA 563266 32 100.0 33 ................................ CTTAGAGATATCTTTCATTGTTGCTCCCCGCAC 563201 32 100.0 35 ................................ TACATATTTAATAATATTACCAGGCTGCATATCTA 563134 32 100.0 34 ................................ ACCGTGGGAAAAGAAAACACGGTCAAGGGCTTAG 563068 32 100.0 34 ................................ AAAAAAACAGGATGCCTATAAAAATGCTGTAGAG 563002 32 100.0 35 ................................ ATTAATATCACGACTGAAGGATTTGTCAGAGAAGG 562935 32 78.1 0 ......T...A..A.....AA..C....G... | ========== ====== ====== ====== ================================ =================================== ================== 19 32 98.8 34 GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Left flank : TGCATATCCGCCTTTTTTATGGAAGTGAGGTAGCAAACGTGTTAGTGTTAATTACTTATGATGTAAATACAGAAACATCTGCGGGAAAGACAAGGCTTCGGAAGGTCGCTAAGCAGTGTGTGAATTATGGGAGACGTGTACAGAATTCGGTATTTGAATGTATACTTGACAATGCCCAAAGCGTGCTGCTAAAGTCTATGCTTACAGATATCATAGATGAGGAAGTAGATAGTTTACGGTTTTACTACTTGGGAAATAATTACAAAACGAAAGTAGAACATGTAGGTGTAAACCGTGGAATTGCAGCGGATGAGACATTAATCTTATAGTGCGAATTGGAAGTGAACACGAAAACCCAGGGAGGCTCGCACCAAAAAAGTTGCACAAAAACAGTATAAATGAAAAGAAAAGTTATCGGTTTATGAATTGAAGATTAGTTGTGGTTAGCGAAATGATACAAATTAAATATATATGTGGAGGTATTTTTGTTGAATTTTGCT # Right flank : TCATACCAGAATGAATAAGTGATGAAGAATAAGACTTTTCATTTTGATATAAAAGGAAGCATATTCAATGGGGATTAAAGGAATCATGCAGGCCAGACATATTCTATTACTTGCGTCAGGAAAACAGAAAGCCCAGGCTCTGTATGAGGCTGTTTACGGTGATATCACACCGGAAGTCCCGGCATCTATCCTTAAATTACATCCCCATGCTGCCGTATTCGCGGAGGAGGCTCTCTCTGTGATCAAAGAAAAATCTTGAAAATAAAATAGTTTGTTGTTCCTTTGTTGACATTCTTCATGTAAGATAAACCAGAGGTGATAACAATGAACTATAAGATTTTACTCGTCGACGATGACAAAGATTTATTACAGATGCTCCGTAGCTATTTTGAACTGAAGGGCTATCTCATAAAAACAGCGGTCAACGGACTGGAAGCTATGGAGCGGATAAAGGATGCCCCGGATATTATCCTGCTGGATGTCAACATGCCGGGGCTTGA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 19196-19421 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPI010000003.1 Anaerostipes caccae strain DFI.1.222 BBIJEEHG_3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 19196 30 100.0 36 .............................. TCTGTAATTTCCCGGATCGTCACATTGTCAAAGACC 19262 30 100.0 34 .............................. TCAGTAGTCGCAGTAAATTTAGAAATCTGTATAC 19326 30 100.0 36 .............................. TTTGCAAGTCTTCTTGTGCCTTCATCCCGAGATAAT 19392 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GATAAATAAAAACAAGAGTTGTATATTTAC # Left flank : GGCTTTGGGCTGATTTATGTGATTCATCACATTGAAAAACAAAAGATTTATTATGAATTTGGAAAAGAACACTGCTTTTTTGTGGTTGTGACATAAGTGAGGAGGAAAAAGAAATGCTGCCGAATGATCCGGTGATACTGTTAAGCTACATCAATACACAGCTGAGGGACTATTATGACAGTTTCGAGGAACTTTGCAAGAGTCTGTGTGTAGACTCAGGAGAGATCAGTACAAAACTTTCGGGTATCGGTTATGAATATCATCCTGAGACAAATCAATTCAGATAGTGGAAAATAAGGGCTGCCGGATGGTCGGCTTATATTGTGTTTCCCAACCTCAAAAAGAGACGAAATGCCGGGAGACCGCTTAAAATGGCGGTTGGCAGCCGATTCGAAAGAAAATGCCGGAAGAACAGAAACGGTTGGGAAAAATTCAGAGAAACGTTGAATTTATCAGGGAAAATGACTATAATAAAAATAAGGAATGGCAGAAATACGTTG # Right flank : CAACAAATGTAAAATACGAAAAGGCATTGAGCTTCTTTAATTTCACAAGAAACTCAATGCCTAAATTTTTACTTTTTCATATCCTATTGATTCGATACATTTATAAAAACTGCTCAACAAACTCAACCGGAAGCATCGTTCGCTCCGCAGTTTCTTCTGCGGAGAGCCCCTGTGACAAGAAACGTTTTGCAACACTTTCCATGCTCTCTGCCACTTCTACGATATATTTGTCATAATCATAAAACCGCATAACACGCTGGCCCCATGGATATTCTTTGATTCCATGGAGAAATTCAATCCCTTCCAGAGCTTTCAGCTTATCTTCCCAGGCGTCCAAATCTTCCACTTCAAAATAAAGCTGAAAATTATCAGGTTTCTCCTGAGGCTCCAGTTTCACTCCGACCAATTCTTCGTAGTTAGACTGCAGAGACAGGCCATTTTGAAAAGAAACATGAACCCCCAGATCCATCTCTACCGTTTGTTCCATTACCTTCTCATAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGAGTTGTATATTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 123102-123396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPI010000003.1 Anaerostipes caccae strain DFI.1.222 BBIJEEHG_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 123102 31 100.0 36 ............................... TTTTACCATGCACCTGCCTGAAATGCAAGGAGCCGA 123169 31 100.0 35 ............................... GCCGATAGCATGGATGGAGATGCCGGAGCCGTATA 123235 31 100.0 34 ............................... ATCTGATACTGTGTTACATTACTAACTTTGTTCC 123300 31 93.5 35 A................A............. TGGGTAGTGTGCTGGTCTATGGCAGCAAAGTTCTC 123366 31 74.2 0 A........GT.....AA.........T.TA | ========== ====== ====== ====== =============================== ==================================== ================== 5 31 93.5 35 GGATAAACATCAACAAGCGTTGTATTGAAAT # Left flank : TCTGCTGGTGAGGCCGTACAGGGAAAGCAAGAAGTTAAAGGTTGATTTGAAAGAGGTAACAGGAACAAGATAATATTGGAAATAGAGAGGTCTGCACCTGGTGTGCAGACCTGCATGATAAAGGAGGTTTCTATGGGAACAATAGCAGTAGGTTTGGCTGTCCTTGGTATTGTCAGTTTGATCGTCAGAAGCATGGTAAAGGATAAGAGACAGGGAAAGTCGATCCAGTGCGGGAATGACTGCAAACATTGCGGCGGGCACTGCGGTCATTGAGAAATGGAGAGTTGTCTCAGCTGACTACATTGAGGCTGGCTGATAATGATTGGATTTCCCAACCACAAATATTTAAATAGAATGGCAGAACCGCAGAAAATGGTGGTTTACAGGCGATTTGAAAGAAAAAACAGAAAATATGAAGGTGGTTGGGAAAAAACAAAGGAAACGTTGATTTTATCAGGGAAACTGGCTATAATAAAAAATAGAAATGGCTTAAAAACGAG # Right flank : AAAGATCTTCTTTCTATGTCCAGGAGACAGAAATTATAATTTCTGCCTTCTATTTTTTTGCCTTCTGTCTGCTGAACCACACCAGTCCACAAGCTGCCGTTTTTATGTTATGATAAAAGAGCAAAACACAAAGGAGGAGCTATGAGATTTGGTTACGATATCCCGGATTCTTTTTGGAGCCTGTTCCGTTCTGTAAACCGGGATCATTACATAGAAGCGCTGCTGAAAATCAGTGAAGAATATGAATATAACAACTACTTTCTGAGCCGGGAGGTCTGTATTCAGGTCCTGAGCGACTGGAATGCGGACAAGCGCATCTGGCTCCAGCGGGAAGAGTTTGAATCAGAACTGGATGTACTGGAGACTCCCCCAAACCGGATACTAAACTGGCTGATTAAGACCGGCTGGCTGAAAAAACTGGATGACTTTTCTACGCTGACATCCAACATTGTCATTCCCGATTACGCGGCCGTTTTTCTCGATGCTTTTGAACAGCTCGT # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:0, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATAAACATCAACAAGCGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //