Array 1 1069368-1073568 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS483364.1 Streptococcus sanguinis strain NCTC11086 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1069368 36 100.0 30 .................................... AGATAAACAAAATGATTTAATGATTAAATA 1069434 36 100.0 30 .................................... ATTATATTAATTTTGTATTTTACCAAGATT 1069500 36 100.0 30 .................................... AAATCATTATACCTATTTTGTGTTACGTGT 1069566 36 100.0 30 .................................... ATCAGCAGAAACAAGGCTGATAGACAAGGT 1069632 36 100.0 30 .................................... GCTACTGAGTTGGGAGCTGGCAGGACTCAT 1069698 36 100.0 30 .................................... AGAATGAGCGGCTAGATAGCAATGCTTATT 1069764 36 100.0 30 .................................... GCAGCAAACCTATGAAGCTCAATATTCTTC 1069830 36 100.0 30 .................................... CAAGCAATTTGACACAAACACAGCCCCCGC 1069896 36 100.0 30 .................................... ATATTTAGAGCTTCAGAGTAAGAGAGCGAG 1069962 36 100.0 30 .................................... ATTTAGCGACTTAGTAGCGTCATAGTCTGC 1070028 36 100.0 31 .................................... CGAGCGTCGTTGAAACCCCGTGTATGTAACA 1070095 36 100.0 30 .................................... GCTATCATTGTTCCGATAGTCGCTAACTGC 1070161 36 100.0 30 .................................... TTACTCATAAGTTTGGTGGCTATGGACAAT 1070227 36 100.0 29 .................................... TTTGCTTTATTGGTTTTACAGCAGTATTT 1070292 36 100.0 30 .................................... CTAAACAGGTTAGAGGTGAGAAGTGGACAC 1070358 36 100.0 30 .................................... AAATGGTATTAAAATCGACCAATCTGTAAC 1070424 36 100.0 30 .................................... CTATTCGAGTTGGACAGATTGGCTAGAGAA 1070490 36 100.0 31 .................................... CATCCGAACTGGAAAGTTAAGCGAAAATGAG 1070557 36 100.0 30 .................................... AGCGCTCGTTTTGCTCTCGTAAGCTATTGT 1070623 36 100.0 30 .................................... TCGAGGGATTGGACGAGTTGACGTTATCTG 1070689 36 100.0 30 .................................... ATAATAGTTTTTGACATCAACAGGACCACC 1070755 36 100.0 30 .................................... GCGAGCCGCTTGCGGCCGCGGTGTCCTGAG 1070821 36 100.0 30 .................................... TGACCGTCTTCAAGAAATAGCAGATTATTT 1070887 36 100.0 30 .................................... GTAACAGAAATAAGTGCTACCGATGTTCCT 1070953 36 100.0 30 .................................... GTATGTTGGTTTTAATCTCACTCTAGCTTG 1071019 36 100.0 30 .................................... TTGAGTTTCAGTTAAGGGGCAGAAAAGCTA 1071085 36 100.0 30 .................................... TGTAACTGATATTAAACCCCTTTAAAATAT 1071151 36 100.0 30 .................................... AGCGGTTGGAGCGCATGCAAGAGGAGCTGA 1071217 36 100.0 30 .................................... TGAGCGTCGGCGATACCCCGTTCTGTAACA 1071283 36 100.0 30 .................................... TTTGAATTTCAGTTAAAAGGTAGGCTTGCA 1071349 36 100.0 30 .................................... ATATAGCTCTGCGTGTCAATGGTAACTCTA 1071415 36 100.0 30 .................................... GCGTATGCCTGGAAATTATACTAGAAATAT 1071481 36 100.0 31 .................................... CGCCGCCCGTTGGTGCCGTAGTATTGGGCTT 1071548 36 100.0 30 .................................... TATGCTGGGTACGGCTATTGCTATTTGGAT 1071614 36 100.0 30 .................................... ACTGTCATCACAGACACCAATCCCATTCAA 1071680 36 100.0 30 .................................... TTATTAATCATTTTTTTAACTTACAAAGTA 1071746 36 100.0 30 .................................... TATTATTGTAGATGAAGCCAACTCTGTTTA 1071812 36 100.0 30 .................................... ATGATATGATTTTCACTCAAAATGCCAGAA 1071878 36 100.0 30 .................................... GAAAGGCAATCGGACGATTGTGAAATACAC 1071944 36 100.0 30 .................................... GATTGAGTTGATGGATAAAGCGCCTAAAAT 1072010 36 100.0 30 .................................... TACAGGTAGTGCATATTTCCCAGCTGTTCT 1072076 36 100.0 30 .................................... TTATCTCTCTTCTTTTATTATGATTGTTTA 1072142 36 100.0 30 .................................... GAAAGGGCTGGTAGAGCTAGACTCAATCAG 1072208 36 100.0 30 .................................... AAAGATACATCAGAGATTTTAAATGAGTTG 1072274 36 100.0 30 .................................... TGAGGGCAATGTATGATTTTAAAGCCGTAG 1072340 36 100.0 30 .................................... AAAGAAACCTGTTTTACGTTCGTCAACTGG 1072406 36 100.0 30 .................................... TGAAACCACTGACTGAACCGTTGAGTCCAA 1072472 36 100.0 30 .................................... TTAGTCCAATCGTATTCGAACTCGTCATGA 1072538 36 100.0 30 .................................... TTGGTGGTCGTCAGAAGGTTATCCAACTCA 1072604 36 100.0 31 .................................... CCAAGGAAGTTTTAGAAAAATATTTACTGAA 1072671 36 100.0 30 .................................... CTGACCGTCTTCAAGAAATAGCAGATTATT 1072737 36 100.0 30 .................................... GCCAAGCAACGCAACAAATCGCTTTGGCTT 1072803 36 100.0 30 .................................... CGCGGCTAAACTTGGCTCAGGAGCTGTTGC 1072869 36 100.0 30 .................................... CGGACGCCTTCTCGTTGTCTAGGCTCTTGC 1072935 36 100.0 30 .................................... CTGCGTCAACACATCACGAGTAGGAGATTG 1073001 36 100.0 30 .................................... TTTAGTGAAGTTCCTCATGCAGACCAGGAA 1073067 36 100.0 30 .................................... CATTGGATAAAGCACTTGAATCTACTGAAA 1073133 36 100.0 30 .................................... TCAATCAATATCGTAAATGAGGAAGGTGAT 1073199 36 100.0 30 .................................... TAAACTTGCAGATCTTGAGAAGAAACTTTA 1073265 36 100.0 30 .................................... TTTAGCATTAAACGCAAATCAAGTCAATGA 1073331 36 100.0 30 .................................... ATTTCTTGCCTTTTTTTTCAACGACTTCGT 1073397 36 100.0 30 .................................... AAGGTCGCAGAGCGTTTTAAACGGTTGAGC 1073463 36 100.0 30 .................................... AGCTTCTTTTTCAAGAATTTTTTCAACCTC 1073529 36 83.3 0 ....................T.TT.TA........A | T,AT,T [1073551,1073560,1073564] ========== ====== ====== ====== ==================================== =============================== ================== 64 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAACCAGAAGTCAAGTCCATGATTGAAAAGCTGGTTGCTACGATTACAGAATTGTTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATCACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACTCTAAGTGATACACTTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTTCTTGTTTTCATCAATGTATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATCGAGTATATACAACTCAATCAACTAAGAGTCTTATTTGTCGAACCTCGAAAAGTCTATGATTTCCCTCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGAGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAAATTTTTTACGAG # Right flank : AAGGACTGAGTATATCAGTCCTTTTGTTCTCTACTTCCCTAAGCAGAATTGGCTGAAGAGTTGGGTGATAAGCTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGAATTTCCCAAGTGCGGGTCATATCGACTTGGAGAAGATCTACCGGCATCCCCATGTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCCAGAGCTTTTTCAATCAAGGAGATATGGCGGGCGTTGGACAGGTAGGTAGCGTCTTGTTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCAATATTTTGGTTGTGGAGGACAGAAATCTTAATGACATCAGTAGGGAGCTGATCAAGCTCAATCTTTTCTTCTAGGTCAGTCTTGTTAAGCAGGACGATTCGATTGCTATCTTGACTGATTTCGAGCAATTGTCTGTCCTGATCTGTCAAAGGCTCACTGGCATTAAGAACTAAGAGGACCAAGTCGGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //