Array 1 2810-1696 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000046.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2809 30 100.0 40 .............................. ACCTTCTCCGCACCTGTAATAGTCATCGATCTGCTTTATA 2739 30 100.0 39 .............................. AGCAATATTACGGCCCTATCCGAATCGGAACTGGTTTTC 2670 30 100.0 37 .............................. ATCGAGCGCCGTTGCATCTCTTGCAGCGCCTTCACAA 2603 30 100.0 37 .............................. ATTTCTCTGTAAGCTTAGGCAGCATGAAAATTCCTTC 2536 30 100.0 37 .............................. TCTTGCGCCAGTTCTTGACAAGCTGCTGCCGATCATG 2469 30 100.0 35 .............................. AAGAAGAAAGTTGCAAGTGTTTTCATGATGTTGTC 2404 30 100.0 39 .............................. TGCAGTTGATGATCGTACTTTCTTCTATCGAAAACTCTC 2335 30 100.0 38 .............................. ACTTCAATGACCCCATGAGTCAACGGGAGCCATTTAAG 2267 30 100.0 36 .............................. CGCGAAGGTGTCGAGATAGATACAAGCGGCGGGGAC 2201 30 100.0 38 .............................. CGACTTCCAAGACGATCAATTCGGGGCATATGGTCGTT 2133 30 100.0 39 .............................. TCCAAAGACATAATCTTGCGGCCCATGACGTAATGTGAG 2064 30 100.0 39 .............................. TGGAACGATTGAAGCCAAAACCTTGCCACGTTACCAGCT 1995 30 100.0 38 .............................. AACAGCATGACGGATAGTCAGCTACGGCGCTTAATCAA 1927 30 100.0 35 .............................. CACGTAACTAATCTGCATGTCGTACACTTTTTAAA 1862 30 100.0 38 .............................. CAACATGACCCATACAGAATCACCGATACTAAGCGGAC 1794 30 100.0 39 .............................. TATGCAACCGCTAAGGCGTCTCCCATGGCAAACGCTTCG 1725 30 96.7 0 .....A........................ | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 99.8 38 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : AGTAGCTGACGACGTATTGAATTTCATAAATCAGACAGAAGTTGAAGGTTTTTGGCTTCATTTGGATGCGGACATACTGGATGCCGCGATCATGCCTTGTGTGGATTGCCCGGAGTCCGAAGGTCTACAGTGGGACGAACTAACCATCCTTTTGAACAGGATACTTTCTTCGCCTAAAGTGATCGGGATGGATGTGACTATTTTAGATCCTGATCTGGACATTATGCATGAGGTAACGCGAACTTTTTCTGCATTATTAACAAAAGTGTTGAGAGTGGAAGTAATCCGACACGAAGAAGCGTAAGATCATAGGGGTTGGAAAAAGGTGGCGGACGTATTATAATTTAACTGTGCTGAAGTTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAAATGAATGGCGTAGCGACGGGATTTTGGCGATTTGGGTGACTTGAATGTTTTGTGTAAGGAAAGGAAACTACAGGAATTACGGCATTTTGATGG # Right flank : AGTCACCGAAGCCGCAATATGTTTTGACCATACTTCCTGTAGCGTCTCTTCCATCCGAACCCTTTTGTCTGATGGATTCATTGTGACAGGCTTTGCTTCCTATGAACAGATTTGTTTGATTTGACGCTTACAACACGATTGTGGAACACATGTTCTGATGGAGGCCATGTTATTGACATGGGCCTACTCTATTGTATTACTTAGTGTTGTTTTTTAAAACTTTTCAGCCTCTTCAAGATTGTCTGTTTGTAAAACAATCTTCTCAGAGTCGAGAACAATCATACCCCTTCATCTACAGACGGCAGGTTACAAAGGAGATCGTTTGAATATGGTTATTTCGATAAAAAAGTGGGTGCTGTTCAAGTTCCCTTTTCTATACAAGGTTAGAGTGGCACAGTTGCAAACTCGAAGGCGATTTCAAGATGTTTTGGCACGGTGCCTGTTTGCCCGACGCAAATCTGCTATCGAACTACCTTATCGCTGCGCGAAGCATAAATCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 134-565 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000003.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 134 30 100.0 35 .............................. CCGTTTTTTTACCGACAAATTACCGGATTAGCATG 199 30 100.0 38 .............................. TCGAACTGAGCGCAGGCTTAAAATCCCCTCGACCTTGC 267 30 100.0 36 .............................. ACCATTCCGAATCCAGCAGGAATATCAAAATTCATA 333 30 100.0 39 .............................. CCAACAGGACCATAGAATAAGAGCGAAATTTGAAATTGA 402 30 100.0 37 .............................. CCGTTCCCGTTTAGCCGCCTCCATTTGCCGTCTGAGC 469 30 100.0 37 .............................. TTAATCGCCATCATTGCACCCTCTTAGTCTATTTAAG 536 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 7 30 100.0 37 GCTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : TAAAATTCGGAGAGATCACCAGACGCCAGATTGAACTTTATGAAGCGCTGGAAATCTCAGCGCCTGCCTCGTTATAATTTGACTGGGGATTTAGGGAATATGTGGAAATGGCGTTGTAGCGGGGTTTTTATGGG # Right flank : CTGGGCTTACCACGTATTTATTCACTCTGCATGTGCCCGTTACTTGAATAATTCGTTTCTGAATCTGACCATCGTGTTTGGAAAAATCCCCACAAAAAAAGCGCCGGCTCACGATGTTATCATGAAACCGGCGCTTATTCGATCGTTTCCACATATACGTTCAAATGGAGCTGCTTTAACAACCGTTCCAAGAGCACCGCCGCTTCCACCCGGGTCGTATGTGCCAAGGGTGCAAATTGATCAGCGCTGCGCCCCTGGGCCTACTCGTCCCATTGGGCGCCGCGGGACTCCGGCTGGTTGCTATTCAGGAAGCGCGTGTCAATTGCGACGAGCCGTTCGATCTATGCCATCAGCGGTTACTTTGTACAGTTGGTGCGGCAGGTCGTGTCCCATGCCGTCAACCAACATTAGCTCGGCGCCCGGGATGGCAGAAGCCGTGTCCTCGCCACACGCCGGGACGAACAGGGGATCGTCCACCCCATGAATGACAAGTGCTGGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 5947-6721 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000003.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5947 30 90.0 38 ....TA..C..................... GTCTTTCACTCCATTTGGTCCGGCCGAAGATGAATTGA 6015 30 93.3 37 ....T...C..................... ATTGGAGCAAATACCAATCTGGTGACCACGAAATTGA 6082 30 100.0 36 .............................. ATAAATCAGCAACACCATCAGGACCATTCTTCGCCA 6148 30 100.0 38 .............................. CGTGTGAGGCGATCCAAACGCCAGATCACGATCATGTC 6216 30 100.0 38 .............................. TCGTTTTGGAGCTTGTATTCAGTCTCCCGATCATCTGC 6284 30 100.0 37 .............................. CATGGCTTAATGGGGGCGACAAGGAGGACGTTATATG 6351 30 100.0 38 .............................. GCTTCTTGGTGTACTCGCTCAGATCCATCTCGGTCCAG 6419 30 100.0 39 .............................. ATAAAAGTGTTATCCAGCTTCAAGAAGTTGTAGTACCTA 6488 30 96.7 38 ........C..................... CAGCATTGGACCTATGAGGAAAAGCGTGTGTTCTCAAG 6556 30 93.3 39 ....T...C..................... TGGGCATAGAAATGCCCGGGTTCAGAAAGGGAGGTCATC 6625 30 90.0 37 ....T...C......G.............. TTCGCTGGCGCTCTCTTCTTCTAGTATATGTTCAATC 6692 30 93.3 0 ....T...C..................... | ========== ====== ====== ====== ============================== ======================================= ================== 12 30 96.4 38 GTTTCGAATGTACCTATGAGGAATTGAAAC # Left flank : AGAAATTTTGTGCGGATAAAATTAAAAAAGTTCAACAAACTCGTGCAATATGCGCAAAAATTAAAGCAATAAAGTGAAAAGAGGAGCTTCGAAGCTCCTCTTTCTGGATTCACACCTCTCCCGCCGATCGGTGTTGCTCGTGAGATCGACAGGATGATGAAGGAATTCCAGATGAAACAAGGGGATATCGCCCAAAAGCTCGGCGTTACCCAAGCCTTGGCCTGAACCACTTCTTGGAATGCTGGAACGTGGCGAATTGAGCCAATCTACCGCACGTACGATTGTCGGGGTTGACGAAGTCGGGAGATCATGGGCTTGGAAAAAGACGGACAAAGCCTTATAATTTAACTATGCTTTTTGTCGTCGACCCCCAATGCTGCAAAAAAGCCCGGGGGTCGACGACAACGAAAGCTTCGCGGCAGAAGGGTTTGTAGCGTTAGCTGTTGGAGATACGAGAGTGTGGAATATGTGGAAATGGCGTTGTAGCGGGATTTTTATGG # Right flank : CCCTTTTCCCAGTTTCGGCATTTTAGACCATAGCCAAACACGAACTCAAATTTTGAACCAAAACAGATCACCTGAAGCCTGGTTTTCTCCATGTAAAACATTAATCGGGATAGATGGCGGAGCTGTGTTTGGAGGATATTTGCTAGGTTTGTCTATTAATGAGGATGGATATACCGAATATTCGGTATAAAAGTACTGGTGGATTTTTTAAGAAACGCGTCACATCGATGGGGATTGTTTTTCTGGATGAAGATAGCATGAGGGAGTGATTAACACTCCCTACTTTATTTTGTAATAACCTCGCCAGAGTCGGAGTTAATTTTTACTGGGATTACCCTTTCCTTTTCTAATAAGCTACCAATCTCAATAGTCCATTGCTTTAAATCAGCATTAAATTGAACCTTCCTTATATAAGGCACATCTACTATGGTTTCTGAAAATCTTAAAGCTTTTTCTACTGCTGTTGCACGGCTTATTGAACTATCAGTGTTGTTTGTTTG # Questionable array : NO Score: 8.96 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGAATGTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [5-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 16839-16134 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000057.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 16838 30 100.0 38 .............................. AGTCTCTGTTTCAGGGGAAGACGAAGTACATTACATTT 16770 30 100.0 38 .............................. TCGGCACGCGCACATGAGGGCATTAAAAATATCGTCGA 16702 30 100.0 39 .............................. ATGCTAGGGGTGAGATGATTCGCTCCATCGCCCTTCTGT 16633 30 100.0 38 .............................. GCCTTACGTACCTGCTGCTCGTCATCTTCCCTATGCAC 16565 30 96.7 37 ............A................. AGCAGAAGAAGGACGATATTCCGATGGTATCGTATGC 16498 30 100.0 38 .............................. TTCCGATGGGACTGTGGAAGCGGCTCCTGTGATCCGGA 16430 30 100.0 38 .............................. CGAACAGCAAAACAATGCCTGTTTGGACAAGCATGAAC 16362 30 100.0 38 .............................. TTTGGTATTAAGGGGAAAAGCGGAAAGCGTAGTGTTAC 16294 30 100.0 35 .............................. CCGGTTTGATGAGCAGTTTTCCTTCTGCGTTGTTG 16229 30 83.3 36 CG.........C.A.............T.. TAGGCATAGAGGTTACCGTCATGCCCATGGACCTTC 16163 30 93.3 0 .C.......A.................... | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 97.6 38 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : AAAAAGAAGTGTACTTTAGTCTTACGTCCAAAGGCAGACACGTTTTCGAAGCGCACGAAGCGATGCACGCAAAGATCAATCGCCGATTTTTAAGCATTTTGGACTCGTTTTCGGAAACAGAGTTGCAGGCGGTGCTGAAGTTTTCCCAGAAGATGATCGATCATCTAAACCAAGGGCTGAAGGGAGATCAGGGTGCACAGCAGGACTCCGATTCTTCTAGCTGACAAGTATCAAAAAAAGCTTCGAAGTATTCGGAATTTAAGGTAGAAGGCCGAAAATATTTATCTGATGTTAAAACACGGGGAACCGTGGGGTTGGAAAAAGGCTGACAAAGGCTTATAATTTAACTGTGCTGTTTTGTCGTCGACCCTCAATGCTGCAAAAAAGCCGGGGGATCGACGACAAGGATAGCTGGGCGGCAAAAGGGATTACGGTGTTTGTTTTGTTCGATACGTAATTTGGGAATATGTAGAAATGGCTTAGTGGCGGGAATTTTACGG # Right flank : ACGCAGCTTCTGCTGTGGGATTGAATGTTGCGAAACCTGTCAGGAATACCCCTTTCCCGATATGATCTTGGTACAATAGCTAAGGTCGCGGGGATAGCGCTTGTTTCCGCCGGATTCCCGAAGATCAGACTGGCATCGGTACGCTGACGAATGTATATGGCCGGATGATTCGCTGCCCAAGACTGAGGTGGATGGATATTATGGATGATCCAAAAGAATACCGCATTAAAGACTCTTCTTCCCAAAAATCGGGCTAATCTTTGCTAATGCGGGCTTCGATACAGTGGAGGGGTGGGCAGAGGCTCCATGTCAGGGCGGCGGGGCGCTAGAGCGGCTCTCTTTCTTTGCCGCTCTGTACTCGGCTGACATCTTTATAACTGGGCGACGTGGCAGCCCATCGTTCCACAAGGAATAGATTTCACGCCGTCCGGAAAAGATACTTTGTAGCGCAAAAAAATGAGGGAGTGGCTACTTTAGTCTCCCTAAGAACGTTTCTGTCC # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 21293-20184 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000057.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 21292 30 100.0 37 .............................. TGTAATCAACTACATGATCAAAGAATTTGTCGAAAGC 21225 30 100.0 38 .............................. CTCATTTGCAGAACGATGGGGAAGAGATTCCTTCACAG 21157 30 100.0 37 .............................. TGGCATCGGTGAAGTTCAGGAAATATCGAGGTCCGGC 21090 30 100.0 38 .............................. ATGATACGTGGTGTGAAGATTGCAGCACCTGCGATGCC 21022 30 100.0 39 .............................. TATGTTGCTATAGTGATATAGCCCCCGTTTGGCCCTAAA 20953 30 100.0 37 .............................. TAAGCTGCGTTAATCGCATTACGTTTTTCCCCAAATG 20886 30 100.0 38 .............................. GGTGTTACATCCCGCCATGCCGCAAACTTGTTTTTTTG 20818 30 100.0 37 .............................. AAGTCAAGCATCAAGGGGCGGTCGCGGGTATTTCATT 20751 30 100.0 37 .............................. CATAATCAATGTGATCCGTCGGCTCCGATCGGTTTCA 20684 30 100.0 37 .............................. TATCATAAGAGGCGTAATATTCCTCTCGGCTGTACGG 20617 30 100.0 36 .............................. TCACGTACTCATTGGATGGGTGTATGAGGATTTCGA 20551 30 100.0 38 .............................. AAGTCCATTTTGAATTTGTCGAACAGCGTAGACGTCTG 20483 30 96.7 38 .................T............ CTCGAACTGCAAAAACCATGGCTCGGAACATGAAGTTT 20415 30 100.0 37 .............................. TTCAAATTAAGACTTCAAAAGAACCCTGCATCAGTAA 20348 30 100.0 36 .............................. TAAAGTTGGTTCAACTTGGCCTGTTTTTCATTTAGC 20282 30 100.0 39 .............................. TCGGATGAGGTCCATGGACGCCTATATCGGGATTGTCAC 20213 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 17 30 99.8 38 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : GACAGGAGCGCTTACCATTCTGCCTGTTCATTCGCAAAGCCGCGGCCGCCTGTTCCTGCCGTTCGCCGACAGCGATCCGCGCACAGCGGAAATTATGTCCAAGCTGCTGCTGCTGGCAGAAGACAGCAAAATTAAAGATCCAAGCATCCTGGCGATGCTATAGCATGTAGAAGAGCGCCCGACAAACATCGGGTGCTCTTTGTGCATACGAGAGCGTAGCGGTCGGAGAGCCCGCTCGGTCGTGGCGAAGAGGTTAAGGTAAGGTAGAAGGTCGAAAATATTTATCTGAGGTTAAAACCCGGGGAACCGTGGGGTTGGAAAAAAGCGGACAAAGGTTTATAATTTAACTGTGCTGTTTTGTCGTCGACCCCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAAGGATAGCTAGGCGGCAAAAGGGATCACGGCGTTTGTTTTGTTTGATACGTAATTTTGGAATATGTAGAAATGGCTTAGCGGCGGGAATTTTACGG # Right flank : TCCGCTGTTTTATTCGGCCAGCTTTTCCTTGAACGATTGAGAGAAAGAGACGACGCGACCCGTCACTTTAAAGGAATGAACCTGGGCTCAAGTGAGGTCATTCCGCTCAATAGTACACCGTGGCACGGAATGCAAGCGGAACAGTGCAAGCAAAGAAAGCCTCTCGAGATCGTCTCGAGAGGCTTTGTGGCGATTAGAACGTAATCGAATGTCTGCGGTCTTGTATGCGTTCGCCGGAACGTGTTCGTTCGACATAGTGAAGCTTGTTGTCAGTCATCAATAAAATCGTAGAACTTCTCGTTCCGTAATGATCGCTCCGAATGTAGATCGGAGAGAGGAGACGTTCCCACTGCAGTGACACGCCGGTGGCAGGCAGCGCATCGTCAGGTGCCGGCTCCGCGTCCTCAAGCAGTTCAAACAACGCATCGACCCGGTCCTCCCGAAAATCCTTGAGTTGCGCTTCCAACTCTTTCTTCCCTTTCGTTACCTTCGGCCAATGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 3 30201-29305 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000057.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 30200 30 100.0 37 .............................. CTTTGATGAGTTTTCTTGTTTCTGCTTCTTCTTTCTG 30133 30 100.0 35 .............................. ATATTTCGTCTCGCGGACAGGCGGAAGCGCCAGTA 30068 30 100.0 35 .............................. TAAAATTTTCGAATCTAGTGGATTTGGACCCCTAA 30003 30 100.0 39 .............................. GGGCATACAGGCTGCTTAAAGAACTCGCGCCTTAGTTGC 29934 30 100.0 38 .............................. CTGTACTTGGAATCTCATAAGGTGGTGACTCCATGGAA 29866 30 100.0 38 .............................. GAATTAGAGATAATGATTTCTGGAAAGTACACTACATT 29798 30 100.0 36 .............................. AAGGACTTTCGGCTGAATACGTCGAATTGTCCCATA 29732 30 100.0 36 .............................. CTACCAGTCCCATGCCTTCCCATGTGGTGGAATATG 29666 30 100.0 36 .............................. TCGCTCATCCATTCGTACTTTGTTTGTTTGATCCGC 29600 30 100.0 36 .............................. CTTGATCCCTATCAGCTCCCTTTGCAAACCTTGCGT 29534 30 100.0 38 .............................. CCGCATAAACGAAGAAGAGCTTCTTTATGCTCGTCAAG 29466 30 100.0 36 .............................. TTTGTTTACGCCTCTATGTTTGTGGCTTTGTTTTGC 29400 30 96.7 36 A............................. GATATTCATCAGGCCTAGAAGGATTCCAGATTTTCC 29334 30 86.7 0 ............T............T..CT | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 98.8 37 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : GTCAGCCGGATGAATCTCTGGATGTGCGTCTCGAAGCCGATCGATGGCACATACCCAGCAGCCCAAAGTAACGACAAAAAAGCCGGAAAATGTTTTTATAAGTCCCGCTTCAATCAGCAGCAGCACCGATGCCACAACCAACAGAACAGCGACGGCAAGTGTCCCGGCCTTGCTATAGAACGTTCATTTTGCGACCCCGCAAGCTTGGGTAATTTCTTCGCTCGTGACGTTGATCCGTATAATGTTAGGGGAAATGTATGGTCTGAAGAAGGCCGAAAATAGTTGTCTGATGTTAAAACCCGGGAAAGCATGGGGTTGGAAAAAGGTGGACAAAGGTTTATAATTTAACTGTGCTGTTTTGTCGTCGACCACCAATGCTGCAAAAAAGCCGGGGGATCGACGACAAGGATAGCTGGGCGGCAAAAGGGTTACGGTGTTTGTTTTGTTCGATACGTAATTTTGGAATATGTAGAAATGGCTTAGTGGCGGGAAGTTTACGG # Right flank : TCACTCCGAAAGAAGTCTCCCACTTCTAAATCTTGCGAAGCTTGATGAAAGTGGGAGATGAATTTCGGTAGGCGAAGCCTAAAGTCTTTTTTATTGCCACATTTTCTATGATGAGATATAATCAGTGTTAGATAAAATAAAGGCTGTTGCATCAGTGACATTGGACAACAATAATCATTCGGTGTTCTCTCTGTATTATCATCTTGTTTTGGTTGTGAAATATCGTAGAAAAGTGATGGATGATACCCTATCTGACTATGTGAAAGAAATGTTTGTTCGATGAGGTGAAAACTATAATATATCCTTAGTTGAATGGAATCATGATTTGGACCATGTGCCTATTTTGTTCAAAGCACACCCGAACACCGAATTGTCCAAATTCATCAATGCTTATAAAAGTTCAAGCTCCGAAAATCAGGGGATGAAGTGAGGTGACTGGACATAGCGAACAAGGCCTATAAGTTCCGTTTGTACCCAACGCCTCAACAAGAACAACTGCT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 94471-94235 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000015.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 94470 30 100.0 36 .............................. AATAATTTAAAATTGTGTCAGGAGGTTGATACAACA 94404 30 100.0 39 .............................. CAAATTGGAAATGTATTCGTCTCTGAGCCTTGTATCTTC 94335 30 100.0 38 .............................. CTTGTAATTATCACTGCCATTACATCGTCAACTCCCAA 94267 30 86.7 0 .......GC....T...........C.... | G,T,T [94237,94239,94241] ========== ====== ====== ====== ============================== ======================================= ================== 4 30 96.7 38 GTTTTGAATGTACCTATGAGGAATTGAAAC # Left flank : GGAAAGTAGGGGAAAACGCCTCCGGCGGCCGCCACCCGTTCAAACGTCCGTTACTCATGATTCAGCCGGGATCTTGTTTTTATTCGCCAAGCTTGCCTCCTTACTTTGGCACGGTGGTGAGAAATGTTTTACCGGAAAATCCAAAGGTCGTTCAGTTTTGTTTTGGTCTGACCGTTCCCGTGAGGCTTCCGAAGTCAGAAGCAGGAGAGAATGGCTAGGTTTTCAATTGGTTTGAGATATGAGCGGAGAAGGAAGTCCTCGTCCACGAGTGATAATTATTTGAACTGGAACTGAAACTCTGTGCTGGAATGAGATTGAAAAAAAGGTGGAAAAAGATTTATAATTTAACTGTGCATGTTGTCGTCGACCCCCGATGCTGCAAAAAAGCCTGGGGGTCGACGACAACGATAGCCGTGCGGCAGAAGGGTTTGTACCGTTAGCTGAGGGAGAGACGAAATTATGGGATATGTGGAAATGGCGTAGTGGCGGGATTTTTATGG # Right flank : GGTAATGGACACACTAGTTTATTTGAAAAGGAATTGAGCCATTATGATTAAAAAATCATTGATTTTAGGAATAGGTGCTCTAACAATTAGTGCATTGCATTCGCAGGCGTAATTACTTCTAATGTTCAGGCCAATCGTGACGAGCAAAAAAGTGTGCAAGATGTTACTTTCGATCCTGTACCTCCTGTGCTCTTGGAGCATCATAAACACCCCGATGCTATTCAAACAAAAGATGGTTTTTTCGTGAAAAAGCAAGTGGGTCACAATGATTACAGCAAAGTTGAAACAGTAAACGATCCTTCTAATACGAATGGTAAAACTAAGATAATCATTTATGATGGCAATGTATATGTTAAAGAGGAAAATACTATGTAAGAGTTGATTAAAAGGCTATTCTATTGGATAGCCTTTTTTAATGGCTGTAAGGTGGATATCTGCGACCATCGCGATAGCTTGCGCTGGTAGGCTTAGGCCCGTTCCGCTCGGGCCTCGTCAGGCGC # Questionable array : NO Score: 8.70 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAATGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 102587-101609 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMTT01000015.1 Paenibacillus tianmuensis strain CGMCC 1.8946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 102586 30 93.3 38 .G........................G... TTGTCAATGGCGACACAGTTGTTAGTGACAGCAGACAG 102518 30 100.0 37 .............................. AAAGTCTTGCGAGGCGACTGGTCTGGAGCGTGGGAAG 102451 30 100.0 36 .............................. ACAGTAACCTGATTGTCATATGGCATTCCATCAGCT 102385 30 100.0 37 .............................. TCCAATCGCTCAAGATATGGTTAGATGGCTTGAAGAG 102318 30 100.0 41 .............................. GCGATTTGGAAAGCCGCTCTAATATTGTTGCTTGTACTCCT 102247 30 96.7 36 ........T..................... TTTTACTAATCTTCATATATTTAATGTACCAAAACT 102181 30 96.7 37 .................A............ TGCAGATCGGAGATGTCGCCTTGATATTCTCCAGTCA 102114 30 96.7 37 .............................T CCCAAGCTGATGTTCTCTTAGCGGACGGCAGACGAGT 102047 30 93.3 39 .........T.......A............ ATCTCCGCCTCTGCGAGCAGGTTGTCGTATGCCTTCACT 101978 30 96.7 38 .................A............ TTGTACAGAAATAAAGCCGTAAAAATGACAAGTACCCA 101910 30 100.0 38 .............................. GCATAGCGTCGTGGGCGAGGCGGTGCGCCTGGTCGAAC 101842 30 100.0 39 .............................. TACCATGCGAACGAGGTTGGGATGAGTATAATAAAAGTA 101773 30 96.7 38 .............................T TATTGTAATGGATACAGCAGGAAGTGGTATGTCTATTT 101705 30 100.0 37 .............................. TACCCTTCAGGACCAGGCATCGTTCGATATTCACGTA 101638 30 80.0 0 .....A...C......C.......A.G..G | ========== ====== ====== ====== ============================== ========================================= ================== 15 30 96.7 38 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : GGCGGTGATGTACAAGGGCAAGATCGTGGAACTGGCTGAAAGTGAGGAGCTGTACGAGAACCCGCAGCATGCCTACACGAAGTCGCTGCTGGCCGCGATCCCGGTTCCCGACCCGAAGGTGGAATCGCAGAAGACGTTCACCGCTGGGGAGGAGTCCTCGAAGGCGGACCCGTACGGCTTGGAGCGCTCAAGCTTCGTTGAAGTGAAGAAGGGGCATTGGGTGGCAGTTGCTGAAGCATAGGGTTAGGTGAGGGTTCGGGAGACGAACGGCTGCTTAGTGGGAACGACTACAAGCGAATGTAAGTGAATTGGGTTGGAAAAAGGTGGACAAAGCTATATAATTGTAAATGCGCGTTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGGTCGACGACAACGATTGTCGCGCGGGAAAAGGGATTTTGGTAGTTGGTGTGGGTGAGATTTGTTTTGCAAGTATGCGAGAATGGCGTAACGACGGCGGTTTTACGG # Right flank : TTTGGTATAAACTCAAGGAGGCAAGCTTAGTGCGTATACGAATCAAATTCCAATTCAAAGAAAAGTTAGATGTTCCGGTTCATCATCAGGAGCTACTCCACGGTATGATTTATCATTGTATTGGGGATGACGAATTTCGGGATCGGCTCCATAACATTGGATTTCCATATGAGAAAAGGCAGTTTCGCATGTTCTGCTTCTCCAAATTAATGGGAGCCCATCAATTCGAAAACGGCAGGATCGTCTTTACGTCGCCGGTATCGTTTCTTTTTTCGAGCTCTCATGATCGATTGGTTAGCGAATTGGCGACTACGTTGTTTGCCAAAAAGGAACTGTATATCGGCCAAAATCGCGTAACCATGGCAGGCATCGAAGTGGTGGACGAAAAAATAAGCTCCGCCATGCATATCCGAATGATAACGCCTGTAACGATGTACAGCACCTTGATCGAAAATAATCGTAAAAAAACATACTATTACTCACCGGCAGAAGAAAAATTT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //