Array 1 98012-98311 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDD010000007.1 Bacillus pumilus strain s8-t8-L9 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 98012 32 100.0 35 ................................ CTACCGCTATTTGCAATGTCCGTAAAGGCGTATGG 98079 32 93.8 34 .............CT................. CTTCTCTGCTTTTGGGGTGTATTTAAAAGTTGTA 98145 32 100.0 35 ................................ ATTTTTTCGAACACCTCGTCTAGCGTTGCCTTTGG 98212 32 93.8 36 ...........C......A............. ACATAATATTGACCGCTGTTTTTCACAATGGATAAT 98280 32 93.8 0 ...........C...................G | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 96.3 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ATGAAGGAAATAGCCGACCGGCTAGGCGAAACGAGACAAAATATCTCAAACATACACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGAACGAAGAAAAAATGACCAATGGGGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGACTGGCTGATTTACCAAGAAGGACCTGGCTTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGGAACTGATGGTGCGAATGTGAGGTGAACATAAAATCCCTGGTACATTCGCACCGTTTTATTCGAAAAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAACTTCTATATAGAAACTTAAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GTATGTATTCAATTGACTAATGCTCAATGTTTNATTTCATTTTCAAGCTTCACCCAATGGCAGCCGCGGTCGCACTCTACATGAGTGTATGGATTGAGGTAGCTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAATTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATCATAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATCTACCGCTATTTGCAATGTCCGTAAAGGCGTATGGGTCGCACTCTATACTAGTGCGTGGATTGAAATCTTCTCTGCTTTTGGGGTGTATTTAAAAGTTGTAGTCGCACTCT # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 98668-99032 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDD010000007.1 Bacillus pumilus strain s8-t8-L9 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 98668 32 100.0 35 ................................ CTACCGCTATTTGCAATGTCCGTAAAGGCGTATGG 98735 32 93.8 34 .............CT................. CTTCTCTGCTTTTGGGGTGTATTTAAAAGTTGTA 98801 32 100.0 35 ................................ ATTTTTTCGAACACCTCGTCTAGCGTTGCCTTTGG 98868 32 93.8 36 ...........C......A............. ACATAATATTGACCGCTGTTTTTCACAATGGATAAT 98936 32 93.8 34 ...........C...................G TATGTATTCAATTGACTAATGCTCAATGTTTGAA 99002 31 81.2 0 ...........C.......TA......-..GG | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 93.8 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GATTGAAATATTTTTTCGAACACCTCGTCTAGCGTTGCCTTTGGGTCGCACTCTACATGAGTACGTGGATTGAAATACATAATATTGACCGCTGTTTTTCACAATGGATAATGTCGCACTCTACATGAGTGCGTGGATTGAAAGTATGTATTCAATTGACTAATGCTCAATGTTTNATTTCATTTTCAAGCTTCACCCAATGGCAGCCGCGGTCGCACTCTACATGAGTGTATGGATTGAGGTAGCTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAATTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATCATAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GTAGCTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAATTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTATGAGGTATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTTTAAATAGGATTAAGAAAGATTCGTGCGAATGTGAGGTGAACATAAAATCCCTGAGGCA # Questionable array : NO Score: 8.64 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 99665-99956 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDD010000007.1 Bacillus pumilus strain s8-t8-L9 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 99665 32 100.0 35 ................................ ATATCGGCCGCCGTTGGGTAGATCATGATGACCCG 99732 32 93.8 34 ...........A......T............. GTAATCTCGAAGTCTTGCACACTTTCGATTCTTT 99798 32 90.6 33 ...........A..................TA ACATAGACGTATTGCTCTCTAGTTCCATATTGA 99863 32 90.6 30 .............................NTC GGTTTGTAACTATATTTCGCACCTCTTACA 99925 32 93.8 0 ...........C....A............... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 93.8 33 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTATGAGGTATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTTTAAATAGGATTAAGAAAGATTCGTGCGAATGTGAGGTGAACATAAAATCCCTGAGGCATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGAGTGAAAACAAAATTCTATATAGAAAATTGAGGGTTTTGACGATCATTCCATAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : TCAAACTGATCTATCTTACGAGCATAAACAGTTTTGTCACACTCTATATGAGTGCGTGGATTGAAATTNAATTTTCCATCCTCAATACTAGACTCTAATTTTGTCGCACTCTACATGAGTGTATGGATTGAGGTAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGTGTTAAAAACATGACTCTGGCCCAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAACAGTAAAATAAGTATGTTTTCAAGAGCAATAGTTTTTAATTAAATAGGATTAATAAAAATTTGGTGCAAATGTGAGGTGAACATAAAAACCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGNTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAANTGTTAAAAACATGACTCTGGCCCAGTAGTCATGTTTTTAAATGAATTCA # Questionable array : NO Score: 8.26 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 101000-101295 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDD010000007.1 Bacillus pumilus strain s8-t8-L9 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 101000 32 100.0 35 ................................ ATATCGGCCGCCGTTGGGTAGATCATGATGACCCG 101067 32 93.8 34 ...........A......T............. GTAATCTCGAAGTCTTGCACACTTTCGATTCTTT 101133 32 90.6 33 ...........A..................TA ACATAGACGTATTGCTCTCTAGTTCCATATTGA 101198 32 100.0 34 ................................ ATCATATCTTCAACCGAATTACGCAGCGTCATCA 101264 32 75.0 0 A.........CC........A.A...CAC... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 91.9 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTATGAGGTATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTTTAAATAGGATTAAGAAAGATTCGTGCGAATGTGAGGTGAACATAAAATCCCTGAGGCATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGAGTGAAAACAAAATTCTATATAGAAAATTGAGGGTTTTGACGATCATTCCATAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : TTTCTGCAAATTATATAAAGTCAAATACCTATCCATTTCAAAATCTACACAAATGAATAATCAAAATAATGTACTTTCCACCTAAATCCAAGCCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCAGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAAATCGCGACGAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACTTCATAATGATCCTTGTATTTATCTACTTCCCACCGATAGACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCGTCTTGTTTGGCAATTTTCATAATCTCTGTGTCAGGGACCGGCACCCGGTTAAAGGTGTCTAAAATGACAACCTCTCCATTCATACTGCGCCCAACATGGAAAGAAGATTTACATTTCACGGCAATACGCCATTGTCTGAACTTCATTGTAG # Questionable array : NO Score: 8.58 # Score Detail : 1:0, 2:3, 3:3, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //