Array 1 50467-49351 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANHX01000050.1 Paenibacillus sp. PAMC 26794 5104_50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 50466 33 100.0 35 ................................. AGGAATATTTTCTGACACTTCTTCAGATTTTCTGC 50398 33 100.0 34 ................................. ATGAATACAAGCCAATGCGTCTTACTCCGGCGAT 50331 33 100.0 33 ................................. GATACTGAATCCCGTTTAGGATTCAGCACAGTG 50265 33 100.0 35 ................................. TAGTCTATTCGCAGTTGACTAGAACTAGTCTTTAC 50197 33 100.0 38 ................................. TCTTTGTTGCTAAAAACCTTACTAAGAAATTCTGTAAA 50126 33 100.0 35 ................................. ATAGTCTGCTCGTTCTCGTTGTAATTGTGTCTCGG 50058 33 100.0 36 ................................. CTGATTGTAATACGGCTCTGACCATATCTCCATGTT 49989 33 100.0 34 ................................. TTAACCAAGTGTTTCAATACGCCATGAGTTTTAC 49922 33 100.0 36 ................................. ATATAATACCAACCACCCAACTGAATTTGTCATCCC 49853 33 100.0 35 ................................. AAAAATGGGTGATGGAGCTAAAAAGTTGGAAAACA 49785 33 100.0 33 ................................. GTTGTATTCGTGATGTGGGGATGGGTGCAACAC 49719 33 100.0 34 ................................. AGAATTCACTATTGAGTAATCCGCCATGGGAACA 49652 33 100.0 34 ................................. CCGTCATTGCCGAAGACGGCACGGAGTACCGCGT 49585 33 100.0 35 ................................. TTCATGCCCGGTACGTTCTCTACGATGTACATTTC 49517 33 97.0 33 ..............A.................. GATAACAAGCGGATGCTCATGGGTAAGTTGGAC 49451 33 93.9 35 ..T.................T............ AACAGACCGGCAATCGTATTGGGTGATGGAGATAA 49383 33 97.0 0 ........................A........ | ========== ====== ====== ====== ================================= ====================================== ================== 17 33 99.3 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGATGTGAGCACGATAGATAGTGAAGGCCGAAGAAGACTATCTAAAGTGGCAAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAGTTTAGACGATTAAGATTCGAACTGGAAGAGTTGATTGATAAGGATACAGATAGTCTCCGATTCTATAACTTAGGTGATAATTACAAAAGTAAAGTTCAACATGTGGGTGCCAAAGATTCCTATGATATGGGTGATCCGTTAATACTTTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGGAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATGATCGGAAATTTGTGATAACCGTTTTAAAGAAGTAGAACTATCGAAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : TGGGGAAGAGATAGAGCACGGCTTCGTTATCTAACTGTGCTCCTAATACCACTAATGAATTCACACGATGAGGTATACCCAAAAGCGAAGAATAAGACAGGGATTTTTTTTATGTGTACCCCTCACTTTTTAACTCGGCTTTGGTGAAGAGAACAAGAGGATTATATATGCACCAAAAAATGAAGCTTCATTAAAAAAACACCAGGGCTTCGAGTTAAATCACTCATAAGCCCTGGTGTTTTACGGTATCCTATTAATTCTATTCTGCGCGTACTTTAAAGAATGAGATCAGTTCTTGCAGTTGCTCGGATACAACCGAGAGCTCATCGGAGGCACTCACAATGGCTGCCATGGAGGCTTCCTGCTCATCAATTGACTGCTCAATTTGTTTACTGCTGCTTGCTGCCTTGCTGACATTGGCAGACAGTTCATCGGCCGTAGCAGACATTTCTTGTGTGCTTGCCGAGATCTCTTCAGTAGAACTGGAGATATCCTGAATC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 62960-62388 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANHX01000050.1 Paenibacillus sp. PAMC 26794 5104_50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 62959 31 93.9 34 --............................... TTCCCGGTGCCGATAAAGGAACGGGCCGGAATAT 62894 33 100.0 34 ................................. ATGTACGTATCTCTATGTACATCAAGCTCTCTAG 62827 33 97.0 35 ...............A................. TTCCGGAAGAGTAACTGATTGAATGGCTGTACGCC 62759 33 97.0 35 ..............................G.. AGAGACATGTGGCAGCGAGGATGTTGTCTGATGCA 62691 33 97.0 33 ...............T................. GGTCTCCCAAAATAGGAGGATATACAAGATATG 62625 33 97.0 35 .........T....................... GTACTCATTTCGGGATCACCAGCTTCTGTCCCGGC G [62605] 62556 33 90.9 35 .........T.........A..C.......... GAACGGGGATTGCGATACTGGATACGTGTGCACTC 62488 33 84.8 35 ................C.C..A........GT. ACTCTTAATGATTTCAGGAAGTGGTTCGGGGAAGT 62420 33 72.7 0 ...A....TTA............T.C.G...TC | ========== ====== ====== ====== ================================= =================================== ================== 9 33 92.3 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : | # Right flank : AAAGTGCATGTATTGAAATTGGAGGAGACAATGGATGTACCTGAACTTGGTACTTATATTCAGCGCTGTTGGTGTAGAGTTTCATGTATATTTTTTAAAAGAATTAGTGGGTTCAAAAATTCTGGTACACAGTATAGATAGACCATCTATTATTTTCGAGGTGATAGATGTGAGCTTGTCTTTTTAGATTACTGGACGCCCGATTTTGGGGAACATTGAACCTTAATGGAATTAAGAGAGGATCTTTTATTCAAAAGTTATAAGAAATGATATTATATGTGCTAAATCAGAATAATATAAATTACCATTTTTCAAAAAGTAATTATTGGAACTCGTGTAGCATGAACATCAAATTATCTTATTGGAAAGGAGCATCGGTTGTGGTTTTAAATATCGTAGATCAAAGTGAAATGTAGGCAAGTTAACTTCTATAAAGTAAATCTGCACAAACAAAACTCCTTTTTTCAAATTCACTAAAAAGAAAAGTCTCTCGCATCGTA # Questionable array : NO Score: 6.62 # Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 883-38 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANHX01000051.1 Paenibacillus sp. PAMC 26794 5104_51, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 882 32 100.0 35 ................................ CTACTTTAGCCGGGATTATGGCGACTTATCTTGTA 815 32 100.0 37 ................................ CCCTGCATGGATGGCAATCTCTCCCCGATGCTTGGTA 746 32 100.0 36 ................................ CACTGCTCCTTATCTGCGAGTGAGTGGTGGAGTTAC 678 32 100.0 37 ................................ CAGTTCCCTTGTGATTGCATGTGTACCGTAACGTACA 609 32 100.0 34 ................................ TATACGCTTGTACGATTTGGTTAGCTTCGAAAAC 543 32 100.0 36 ................................ TCATCCTTGAGCAGGAAGGGTGCTTCCCCTTTGGTG 475 32 100.0 36 ................................ TGTATCGAACTTGGGGTAAAGTCAGATTTGGAAGCT 407 32 100.0 35 ................................ TTGCTTCGTTGGAAGCGCGTCGATATAAGTTCCGC 340 32 100.0 36 ................................ TCTTCTCTCCACCTTGGCTTGTAAAAGGACGATCGA 272 32 100.0 34 ................................ TTTCGTGGTGCATTTACAGTGCGGCTTGTAAAAG 206 32 100.0 36 ................................ TCGAAATCATTCATTAGCCATAGTAACGAATTTATC 138 32 96.9 37 ...............A................ ATTCGGATAAGTGTGTATGGACGCTCATACTTGCGCA 69 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.8 36 GTCGCACTCCGTATGGAGTGCGTGGATTGAAA # Left flank : TAAACAGTTCTTCTTTATTATCGAAAAAAGTATAGATCGTTCCCTTGCCCACATTGGCAAGTCTCGCAACATGCTCCATCGTTGTGGCCTTGTAGCCAAACAGGGCAAAGGATTTCTCGGCAGAATCCATCACCTGTTGCCTTCGATCTATCGTTTTCATCACATATACACCTCCTTGTAGGTTGAAAGGATAATGGTAAGGTAAGCCCTTTATTGACCGTTTTACTATTATGGTCAGTTGGTCGTTAACAACTGTAGCACTTGAACAGGGAAGATGGATGTGATCTTTGTCATAAACGGATAGGACAGGTGCGAATGTGATGCTCACATGAAAACCCTGAGGGATTCGCACCTCAGAATTTGTCGAAATGGGCAAAATTGTTACCTTAAGGCAACATGTAGGCATAATTTGATTGAATAATGATATGGAAAGTCATAGAATAATAGTGAAAAAACGTGTTTTTAATGGCTCAAATCGTTAAGATACGTACTTTTTCGCT # Right flank : ATCATCAACGCATACGTGTCCGCGTCACTGTCTTTGGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 2 6932-6494 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANHX01000051.1 Paenibacillus sp. PAMC 26794 5104_51, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 6931 33 100.0 33 ................................. CCAGCGATCTGCGATCTGAATATTCTTACGTTG 6865 33 100.0 36 ................................. CTATACCAGTACCTACAGGCGCGGTAGCAACACCCG 6796 33 100.0 34 ................................. TGTCCGATGTATGAAGAATTTATAATCGCGTTTA 6729 33 100.0 35 ................................. AATCTATGTGTAGTAGATCCACCACTAACTTGCAG 6661 33 100.0 35 ................................. TATGAATCTCAGCAAGTATTCACACGCCTTACGAA 6593 33 100.0 34 ................................. ACGAACACTCTCAAATGATTTACTCCAGAATAAA 6526 33 93.9 0 ..........G..T................... | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 99.1 35 GTCGCACTCCATACGGAGTGCGTGGATTGAAAT # Left flank : TGCAGCCGGACATTCTGCTGTTCGATGAGCCGACATCGGCACTCGATCCCGAACTGACGGGAGAAGTGCTGCGTGTCATCAAACAGCTTGCACAGGAGAATATGACCATGATGATTGTCACGCATGAGATGGGCTTCGCCCGTGACGTTGCTGATCGTGTATTCTTCATGGATAACGGGGAGATCGCAGAGGCAGGTCCACCAGAACAGATCTTCGGCAATCCGAGGCTCGCACGTACCCGGACTTTTTTGCAACGGGTGGAAGTGGAAGGATAGAAGGCTGAACGTAGAGGTAGCCAGGTGCGAATGCCAAGCTCACATGAAATCCCTGGGAGATTCGCACCTCAGAATTTGTCGAAAGGGTCATTTTTGTTCCCTTTTGGCAATAAGTACTTGAATATTCTGGATGTTGTACATTAAAATGAATATAATAATTAGCTCGATAAACGAAAACACGTAATAAGTATATATTCATATGCTGCTGTTACGTGTTTTTTCGCT # Right flank : ATGACGAGCTTGCTGCGGGCTTGGTATAATGGAGGCAGAAACAGAGGAATGGAGTGAAGAGTATGTCGGAATTCAGAAGTAAAACCTACACACTCATGCACAAAAATGAACCCGTGGCTGAGATTAAACTGGATGAAGCGACAGTCTCTATTTCAGCTATTGGACAGGTCTATGCGAAACACCATGTACCCGTAGGCATACCTGTCAAGAAGGGGAAGATAGATCGTGCGGCACTGAATGAATGGTGGAGAGGCCGAGCGATTCCTGCCAGCCGGGACGGGATTCAAGAAGCACTGCTCGAATTGAACTTGTCTGTGACACAAAAACTGTTGGATAAAAGCTATGGACTTAGCTTGTCCGATCAATACTGGATTCGTCCATCTGCAACGGATTTGAGATGGAGCTCCATTAACTTTTTCGACAATTCCTTTTCTGAGGATGTGGGAAATGTATTGTTCGGGCAAGGTTCGTCAGATGTCATGAGTCTGATGTCGCCAGAC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATACGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //