Array 1 3585454-3582561 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134328.1 Bacillus freudenreichii strain NCTC4823 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3585453 32 100.0 34 ................................ CATACTCAAGTCTTTTAATTTTGAGATTTTTTCC 3585387 32 100.0 34 ................................ TGAGCTTGAAAGACAAGAAACCTACATTGTTGAT 3585321 32 100.0 35 ................................ AGGAGATTTATGCGGCAAAAGGCACTCACGTTTCA 3585254 32 100.0 34 ................................ TCGTCAATCCAGTTGTCACCGGTGCAGCAGACGC 3585188 32 100.0 33 ................................ TTCGTCACCAAACTCGTCCGCCAATCGCTTGTA 3585123 32 100.0 34 ................................ GCCTGACTCGACGTATTAACCGCCGACCCTGCGT 3585057 32 100.0 35 ................................ CCTGTCCGACTGTTGGCGCTACGATACGTCCGACC 3584990 32 100.0 36 ................................ TCCAAGCGTGGCGACTTGTGGGAAGAATGGCGGAAG 3584922 32 100.0 34 ................................ CCGTCTGCTGATTAAAGACGATTTTACAAACGAC 3584856 32 100.0 34 ................................ CGGAAAAGCAATATTATTCCCATAAACCATTAAA 3584790 32 100.0 34 ................................ CGTATGCAGTCCGGAGACCAAGCGCTTATGCACC 3584724 32 100.0 34 ................................ ATTGCAAGATTTACATACTTTGGTAGCCATCCGC 3584658 32 100.0 34 ................................ CGAAAAGGTAAAATCGTTCACCGTCCTGCTCGAC 3584592 32 100.0 34 ................................ AACAGGAATATCCAAAGGTTGCAAAAGTCTGCCG 3584526 32 100.0 35 ................................ AATTACATTGAGTGGGCAAGGATCGTTAAAAGCGC 3584459 32 100.0 36 ................................ GGAATTGCAGCGGCCGGCCGGCCTCGACTACGACCC 3584391 32 100.0 34 ................................ ATTTACAGCACCAACAAAGGACTTACATTTCTAT 3584325 32 100.0 36 ................................ TTTCATTCAGCTGATCTACAACTCTATCAGCTTCAC 3584257 32 100.0 34 ................................ CTTGTACATTGTGATGTCCTCATTGATGTTTGCG 3584191 32 100.0 35 ................................ ACACTCTCGCTCTCACACCTCGGACACCCCGTCCA 3584124 32 100.0 35 ................................ ATCACGCTGCATACTTTCTCAACTGACACCAATTT 3584057 32 100.0 36 ................................ TTAATGGTGTGTTAATGGCTCTTTCTTTCGTCCATC 3583989 32 100.0 35 ................................ AAATAACAACATCATAATGAAAACTACTGATGATG 3583922 32 100.0 36 ................................ CGGCGTACCTTCGAATGTAACTCCGTCGTATGTCAG 3583854 32 100.0 33 ................................ AAAATCGCATGGCCCGTCATTACCGGCCTAACA 3583789 32 100.0 33 ................................ TCTAATCCGATCAACGTAACGTCAAAGCCCGCC 3583724 32 100.0 35 ................................ TGCAGCTACTCTGGCACTCTTGTAATTTCCTGTTG 3583657 32 100.0 35 ................................ AAAGGGTCCGATTGCAGTCACTTTAAATACTGCAT 3583590 32 100.0 36 ................................ AACCTCTTGTTGCTGTAATAAAAACTCTAGGACTTC 3583522 32 100.0 36 ................................ TTAGACTTGGCATTAACCTGAACTTGATAATCCTTG 3583454 32 100.0 34 ................................ AACATAATCATAATCAACTCACATTAAATATTTA 3583388 32 100.0 34 ................................ CGTTCTACGGACCAACGAGCGATCAGGCAATCCC 3583322 32 100.0 35 ................................ TCCGAACTACGCATTATCCCTTATTTCGAATTGCC 3583255 32 100.0 34 ................................ AGTGGATCAATGGAATATTGCTCACACAACTCAA 3583189 32 100.0 33 ................................ CAAATCTCATGTCTTCATGCGCGGCACTAATAA 3583124 32 100.0 34 ................................ TGAATGGTTATCCTGGCAACAAAAAGTGATTCGT 3583058 32 100.0 33 ................................ TGGATCAATCGTATCATCAAAACTGAAAAATCC 3582993 32 100.0 36 ................................ ACAAACTACATTATCATCTTGTGTATGTGTATATTT 3582925 32 100.0 34 ................................ ACCTTGTGGACCAGTAGGACCAGCTGGACCTTGT 3582859 32 100.0 34 ................................ CTAGTTGTGTGTTTGCTGGTGTTACACGATCCAC 3582793 32 100.0 36 ................................ TGGAACGGATCTCCCGGGTCATGTGTGTGCCGTTGT 3582725 32 100.0 34 ................................ TTCAACCTCTTTTATCAGCATGTTGGCGTTTAAC 3582659 32 96.9 35 ...................T............ CGGGATTTGGTTGACACCATGCACTCAACCGCAAC 3582592 32 96.9 0 ...................T............ | ========== ====== ====== ====== ================================ ==================================== ================== 44 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : CGAATATCCACCATTTTTTTGGAAGTAGGTGAATGAAGTGCTCGTGTTAATAACATATGACGTCAGTACTACTACTCCAGAAGGTAGGAAAAGACTTAGACAAGTCTCCAAAAAATGCTTGGATTATGGACAAAGAGTCCAGAATTCTGTGTTTGAATGTGTTTTAGATTCAACACAACTTAAACAGTTGAAATATCAATTAGAAGAAATTATCAATAAAGAAACTGATAGCTTAAGATTTTATAACTTAGGTAAAAACTATAAAAGCAAAGTAGATCATATTGGAGCAAAGGAATCTTATGATATTGAAGGTACGCTGATTATATAGAGTGGTGCGAATATATAGCTCTCATACTTTTTCAAGGAGACTCGCACCAAAATTAGTTCGGCTTTTCTTAATAAATTAATAAAAGAATTCAAATGTATTCCTTTTTATGGGAATAAATGGCGTATTTATGCATGTTTTTCCTTTTTGTGGATAAAAATGCATGAATTTCGCT # Right flank : TGCAATGGACAATGCAGCTTGTGAGCCTACTTTTCGCTCAAACTCAAGTTCCATTATTTTTTAATAAAATGAATCTTTTTCCCCGCTCATTCAGTATATATGTTTAGAAAATATTTTAAGGGGTGGCTGTTATGGGTATTTTAGCAAGGTTTAAAGATATTATGTCGAGCAATATCAATGCATTATTGGACAAGGCGGAGAACCCGGAGAAAATGATCGATCAGTATATGAGGAACCTCAACAGCGATTTGGGCAAGGTCAAAGCTGAAACCGCTTCAGTGATGGCAGAGGAACAGCGTTCGAAACGGGCTTTACATGAGTGTTCAGCTGACATTGAAAAGATGCAGAGCTATGCAGTCAAAGCTTTGGAAGCAGGCAATGATGATGACGCAAGGAAATTCCTGGAGAAGAAGGCTTCTTTGGCTGAAAAAGAAGCGGAACTGCAGCAGGCATACAGTTTGGCGGCTTCTAATGCGGTTCGGATGAGAGAAATGCACGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //