Array 1 66367-64356 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJB01000004.1 Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 strain JCM 12249, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 66366 36 100.0 30 .................................... CAGGGCCTGCGCACACAGCAGCAACTCGCA 66300 36 100.0 30 .................................... AACGCCTCGCTACTTGCTTTTGGTGCAACG 66234 36 100.0 30 .................................... TGTTTCAAGCATCACAACCAATGGGAAACG 66168 36 100.0 29 .................................... GGCATAAGATTTTCAAGATTATACTTCTT 66103 36 100.0 30 .................................... ATAAATCGTGTCCATATATTATAATGCTAA 66037 36 100.0 30 .................................... AGATTGTACCCGTTAGAAGCATGGGCGTAA 65971 36 100.0 29 .................................... AAAGTAGCCCACGATGCACATGCACGCCG 65906 36 100.0 30 .................................... TTGGCAGGTATTCCGCACTATGCAGGCGGA 65840 36 100.0 30 .................................... TGAGAGAACCAATCTCTGGGAGAATAGACG 65774 36 100.0 30 .................................... GGTGACCGCTGCGCTTGTCAGGCTGAAATA 65708 36 100.0 30 .................................... CAATATGAACGAACAAATTCAAAGCATCCT 65642 36 100.0 30 .................................... TACGCGTCACCGAACTTGCACGCATCCACG 65576 36 100.0 30 .................................... CTCGCGTATGGAATGACATTGCCCACATCA 65510 36 100.0 29 .................................... GAATAAATCTTATTATAAGCAGCGATGCG 65445 36 100.0 30 .................................... CAGGTAGCAATAAAAAGAAAGTGGACAAGG 65379 36 100.0 30 .................................... TCATAAAATGAATTAGCAAAAAACTTGTCA 65313 36 100.0 30 .................................... CGTGTCAGTTTTCGTAATATAGAACAAGGG 65247 36 100.0 29 .................................... AACCATTGGCGCACGTGATCAACATCAAC 65182 36 100.0 30 .................................... ATTATATATCTTATTATAAGCAGCAATCCT 65116 36 100.0 30 .................................... CCACATGCAGCGTGACGATGGCTGAGCGCG 65050 36 100.0 30 .................................... TAACATCCTTAATTTCTCTTGCAATAACCT 64984 36 100.0 30 .................................... TATACGAGTATGAGCGGAATATCACCCGCG 64918 36 100.0 30 .................................... TGGTCTTATAATATTTGTTGTCGGCTTCTT 64852 36 97.2 30 T................................... GCACGTTGGGGTTGTTCTTGTTGTAGGGCA 64786 36 97.2 30 .............................T...... AGAAAAAGGCCATCGTAGCTGGACTTGACA 64720 36 100.0 30 .................................... AAAAGACGGGTTTCAGGGAAAGCATTGTCG 64654 36 100.0 30 .................................... TGTTGGTGAGCCAATCATAGAGGTTGCACA 64588 36 100.0 30 .................................... TACGCAGAACTTCTACTCGGCGCGCAATAA 64522 36 97.2 29 ...................................T GGTGAGGTCCATCTTGCCGAAGGGCGAGT 64457 36 100.0 30 .................................... CGGCCTTATCCGTCATGTGAACGTGCAGCG 64391 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.7 30 GTTGTGGTTTGATGTAGAATGAAGATATAATACAAC # Left flank : CAATGACAACCGCCTCTCTAGAAAAATGTTTCTCAAAAGAAGCCAATAAGATGCAACTACCTATACTCAAATGACCTACCTTCGCCTTAATCGTTACCATATCATGTGGCTTTTCCTAATGTTCGACCTTCCCACAAACACCAAACTTGAGCGTAAAGAAGCTGCCCGTTTTAGGAAAGACCTCGAACGCGATGGCTTCACCATGTATCAATTTAGCGTGTACGTACGCTATTGTGGTTCATACGAGAGCATGAACGTACACATCAAACGGGTTAAATCGCTTGCTCCCACCAAAGGTATGATAAGCATCTTGGCCGTAACCGATAAACAATATTCCAGCATTATCAACGTATGGGGAGAAATTGCAGCAAAACAACACCCAAAGCCCATTCAACTAGAGTTTTTTTAGTAACTTTGTATTAAATAAGCCTCATCAAACAACTTCATATCGCCCAATATGGTTTTCAAACAGTTGAATATCAGTAATGTAAGTGGTATAT # Right flank : AAAGCACTGGAATAACCAACCTAGCAAATGTCCATTACTAAAACCCGAGAGGTTTTCAGCCTACAAAATGTCCATTACGCCATATGATACAACTACTGCACTTTCTATCTCAATAGTACTTGGGACAAACAACTTACGTTGTTCTGAATTCATCGAGCTCACATTAATTATGGTGTGTCCTTTTACGCCTTCTGTTTGTTGTAAGGATAGGCGCGTAGGGAAAAGTGATTGGGGATGGACAATAACGAAAAGGGGATGGCAGAAGCTAATCTGCCATCCCCTTTTGGGTTTTGCCACTTGGCAAATGTGTGAGACTTATTTCACCATTACCTTGGCAACCTTATTGTTTATTGTAACAACATATACGCCTTTGGGCAGAGAGAAGCTTTGGCTTGTGCCGTTCATCTTGGCCTTCTGTACCAGACCGCCATTTATGCCATACACGTTAACCACGCTTCCTGCTGCGGCTTCTACCACGATACCGCCTTCAACAACCTTGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGAATGAAGATATAATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //