Array 1 46469-45179 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABALU010000013.1 Neisseria meningitidis strain 1814 NODE_13_length_47146_cov_35.225832, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 46468 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 46402 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 46336 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 46270 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 46204 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 46138 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 46072 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 46006 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 45940 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 45874 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 45808 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 45742 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 45676 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 45610 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 45544 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 45478 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 45412 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 45346 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 45280 36 100.0 30 .................................... CGTCTGCTTTGGAACTGAAGCAAGGCGACA 45214 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACAAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //