Array 1 13821-14714 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALTO01000002.1 Streptococcus agalactiae GB00557 ctg7180000005213, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13821 36 100.0 30 .................................... CAAAACAATCAGAGTTCCGCATGATGCAGA 13887 36 100.0 30 .................................... ACGAGCTAACGGTTACCTAATCAGTCGCCG 13953 36 100.0 30 .................................... TATCGATATTGATGATTTAACATCAATTAT 14019 36 100.0 30 .................................... TTAATTAAGGTATTTATACCACCTTTTTGT 14085 36 100.0 30 .................................... AGAGTGTGTCCAAGACCAGAGTTACTGTTT 14151 36 100.0 30 .................................... CTATTGGTTAGAATTTTTTTACAGGAAGAA 14217 36 100.0 30 .................................... TGCTAAAAGGTAAATTTAACATTCCAGGTA 14283 36 100.0 30 .................................... TGTTTTAATCATCCAAAATATGTTGCTTAA 14349 36 100.0 30 .................................... TCATCTGGTGTAACTTGTTCGGCCATCATC 14415 36 100.0 30 .................................... TCTAAAATCAAGGAACTGAGAAAAAATAAA 14481 36 100.0 30 .................................... TATTTGATAGCGGTAACGGGTCATATACAA 14547 36 100.0 30 .................................... TGGTGGTATTTATAATGTACGAGCAAATCG 14613 36 100.0 30 .................................... GATAAAAAGTGGGAGCTGAATTAAAAGGCA 14679 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATCACGATTTTAGAACTCATTAAGGCACTAGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CATTTGAACGATTTTTATATTCCTGATATGTGTTTTAGAGCTGTGCGGTTATTATGCTAGGGCACCGTTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATACGAAAGACTATAATTCCAACCTTATGGTTAAAGGGCTAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //