Array 1 598-1405 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTOK01000034.1 Pseudomonas aeruginosa strain AZPAE15010 AZPAE15010_contig_34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 598 28 100.0 32 ............................ AATCGGGGCTTTCTTGATATCCGTCCAAGCCT 658 28 100.0 32 ............................ AGGCACGCATTGCCTTGAAAGGCGTTCTCTTC 718 28 100.0 32 ............................ TATGATCATGCCCCGTCCTCCGGCTCCAATAC 778 28 100.0 32 ............................ TGAAGGCCAACCCGCAAGTCAGCAAGGGCATC 838 28 100.0 32 ............................ AGGTTCGTGGCGGACCGGAAAGACCTCAACCG 898 28 100.0 32 ............................ CTGGACGCAAGCAAGATCGTAGGGCGCTGCCC 958 28 100.0 32 ............................ ACCACCAAGATGGTCCAGGCCGTGCGTTCGAT 1018 28 100.0 32 ............................ GGCCAACCAGATCGTCTACACCGCCAACGTGA 1078 28 100.0 32 ............................ TTGATGGGTTTGTACTCAGGCCCGGAAAACTC 1138 28 100.0 32 ............................ ATCAAGGTCAACCTGGGCTCCGGCGCCGGCGG 1198 28 100.0 32 ............................ AGGTCTTCGAACTCGAACAGCTTCGCGAACTG 1258 28 100.0 32 ............................ TGTGTACCCCTGCGCGTGGAGCGCGGGGCGAC 1318 28 100.0 32 ............................ GTCATGGGCGAGCTCTACGCCAACCCGCAAGC 1378 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTTCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGTTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCCGGAGAGCCGGCGGATAACCGCAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //