Array 1 1830362-1833302 **** Predicted by CRISPRDetect 2.4 *** >NC_017527.1 Methanosaeta harundinacea 6Ac, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 1830362 36 100.0 37 .................................... AACCGTAACCAGGCTCCCCTAGAGTAGTGCTTTTCTT 1830435 36 100.0 37 .................................... TTTTAAGCGGGTTTGGAATTCGGCGATTGGTTTTCTT 1830508 36 100.0 36 .................................... AGCTCCAATTCAGCGAAACGGCATCGGTGCCAACGG 1830580 36 100.0 40 .................................... TTTGCGCTGACAAGATCTTTGTCGAAGGGTATATCGTTAA 1830656 36 100.0 37 .................................... ATTATTTGAAGAAATCGAAAAAATTTCAGAGAAAGAA 1830729 36 100.0 37 .................................... TATAGACGATTCCGCCTACTATGATCAACATTGTTGC 1830802 36 100.0 37 .................................... TCATTTTCCCTAACTTCTCTACCACGATTAGGGGGTA 1830875 36 100.0 40 .................................... AGCCATAGCCTCCTGATGACCTTCCGGCCCCAGACCTTAT 1830951 36 100.0 43 .................................... ACCTCCGTTCCGGTTGCAAGATGTCCATCGATGTCTTCCCCAG 1831030 36 100.0 39 .................................... GATAGAAGAGGTAGATCGAAGCCCCCTTCATTGCTGACT 1831105 36 100.0 36 .................................... TTGTCAACGGTGAACAACTGGGGGGTACCGCTGAGC G [1831124] 1831178 36 100.0 35 .................................... ATCTACTGAAAATTCAAAAGATGCGTTATAGTTCA 1831249 36 100.0 37 .................................... CGAGAGGGCGGCTCGGCCCAAACCCGCTGAATCGGTC 1831322 36 100.0 42 .................................... ATGGGGGCGTCCAGGTTGGCGAGGTCGCCGGGTTTCGCGGCC 1831400 36 100.0 43 .................................... TGCGATCTCGGCACGGTATTCATCTACCTTATCTGGGAAGTTG 1831479 36 100.0 36 .................................... GCCGCAACAAATTCCTCTGCCGCGACCAAGACGGGC 1831551 36 100.0 40 .................................... CATAGCGTCATCCTCCTATGGATTGCCGGAATCGTTCCGG 1831627 36 100.0 39 .................................... TTACAAAACCGTGCCCGCGTTGGTTATACAACGCTTCTC 1831702 36 100.0 37 .................................... CATTATTTCGCTCCTCAATCTCTCTCGTACGATCAAC 1831775 36 100.0 40 .................................... TCCCTAACACATGGAGATCTATCTTGCTGAACATTTCGGC 1831851 36 100.0 39 .................................... TCAAAACAGCAAGACTATAGATGATCATAGCTGTCCTCG 1831926 36 100.0 37 .................................... CGGTCGACGCCGGCCGGAGGATGATCATCTCGACGGA 1831999 36 100.0 44 .................................... ACGATCACCCAGACCTGCGAGGGAGGGCCCCGGGGAGGGACGGC 1832079 36 100.0 35 .................................... GAAAATAATGGCTTTAGCTTCTTCTAGAACATCCT 1832150 36 100.0 37 .................................... AGAGTGGATATTTTGATTGCTTAGAACCAAACCGGAA 1832223 36 100.0 36 .................................... TTATCATCCTGAACATCGTCCAGCATGACCACTATC 1832295 36 100.0 36 .................................... GTCATCAGACGTCAGCCCCTCCTGTTTTAAGTTCTT 1832367 36 100.0 40 .................................... ATCTCTAATCTTGAGCAAGCCCGCGCTGACGAGACCTTCA 1832443 36 100.0 37 .................................... TGTTTCGGGCTTCCCTAAGGAGGCCGTCAGCATATTC 1832516 36 100.0 43 .................................... GCCAACCCGACTATCTTATCCAGCATCGCTTTTTCAAGATCGC 1832595 36 100.0 43 .................................... ATAGTAGCGTGCCCCGTGAGCGCGCAGGATAAAGTTGGTGGCG 1832674 36 100.0 39 .................................... GTTTACCTTTGGAACCCATATCTTTTGCCAATATTCTTC 1832749 36 100.0 41 .................................... AGGAAGTCCAACACAAACTGAATAACCTGTGCGTCTGTGAG 1832826 36 100.0 39 .................................... GGGCGGCCATCAGGCGCAACCCTCAACGCAGATACTTAA 1832901 36 100.0 36 .................................... CGCACGTATTGAAAAGAAGGTAAACAAGGAGAGAAG 1832973 36 100.0 36 .................................... ACAAGGGCGATGTCTTCAACCTTGCCGGGCAGATGC 1833045 36 100.0 37 .................................... GATAAAGGCGCCACAACAATGATATCATCATAATGAC 1833118 36 100.0 38 .................................... TTGATATAGGATGCCGAAATATGACGCAGTGAGCACTA 1833192 36 97.2 39 G................................... GAATTGGAGCCTATCCATCCCAAATGGATACCAGGTTTG 1833267 36 91.7 0 G.............................C..G.. | ========== ====== ====== ====== ==================================== ============================================ ================== 40 36 99.7 38 CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC # Left flank : CAAGGGCCGGGTGGAGATGATAGCAGCGCTGACGGGTCTCATAAAGCATGACGAGGACAGGGTGATGATCATCGATCTCGGCCCGGTGGAGGGGATGGCGGAGGATAGGATAGAGTTTCTGGGGGTGCACAGCCCCAAAGAGAAGGAGAATGCGATCATCGTATGATGCTAAAATCGGCGATCTGACGAGACCAAACCGCAATCGATTTAAACCTTGAGCAATATCTGTGAGAGCAGAAGCTCTGGACAATAAGCCCCCTGTAACATCAGGGCCGTCCATCCAGTGGGACGCCAGGAGGGACCGAAGAGGTCCCTTTATAAGCAGAGGCTTTGCGAGAGGTAGAGTGGTGTCCAAAACCCTGGGACCCGCTCGAAAAGCCCCTGCATAGCGAAAATGCCTTCATTCCAGGGTCAACATTCTGAATGTTTTCTATGGAGTTGATGAACCTCTCGAAAATCGCCTTTTTTTCGATAGCAGTAAAGGCCGAAAAACGGCCGGC # Right flank : CATCGCCCCGGAGTGCTCTGTCTCCGGGGATTCAGCAACCGGAAAAAAGTCTGAAAAGGGAAAAGGTTATAGTTTTTTAACGAGCTGCTCGGTGAGGGAACCCATCCCGGCGGATTCTTTCTCAAGGGTTAGGCTATGCCTGTAAGTTCCTTTTTCAAAATTGAAGACCTTCACCGGAACCCAGTTCTGTAGCCTCGTGCCTATATAAATCGCAAGATCGATCGGCCCTGCATAGAAGAGGAGAACCTCTGTGACACCGCTCTTCATGGCCAGATCTTTCAACCCGTTTATCTTCACCATAACCTCGGGATAGTCCTTGGGCTCCAGCCAGGTATCTCCACTCTTCCAGCTGATGAGCTGCACATCCCAATCTTGATCCTTCAGATAGTTGCCGACTGAGGCCTCCAGATCCTTACCGATGCCGATAGCTATGGCCAGGGGCCGTTTTGATAGCCCAACCTCCTTTCCCCCCAAGGGAGACTATCGTCCGGGCCAGCTCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.30,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : NA //