Array 1 55991-55111 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUM01000004.1 Ligilactobacillus salivarius strain FWXBH9_2 scaffold4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 55990 36 100.0 30 .................................... AACAAAAATCAACATAAAATGTAAGACTTG 55924 36 100.0 30 .................................... ACAAATATTACTCGGACGATCCAAGAATAG 55858 36 100.0 30 .................................... TTTAGTGTTGACGGAGAACCACAACGTGGT 55792 36 100.0 30 .................................... CGAAAAGACGGCCGGTATCAAACTAGCCCA 55726 36 100.0 30 .................................... AGCGCACTGAACGGTTCATCCATCAACACA 55660 36 100.0 30 .................................... AAAGCATTAAACGTCTTATCGTTCATGTCT 55594 36 100.0 30 .................................... TGATATTGGAACAGAAAGCCAAATGAATAG 55528 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 55462 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 55396 36 86.1 29 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC T [55362] 55330 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 55212 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 55146 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 13 36 95.7 34 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTATCG # Right flank : TAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.30, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //