Array 1 44508-42191 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSAQ01000034.1 Prevotella copri strain AF11-14 AF11-14.Scaf34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 44507 30 100.0 35 .............................. TACAACCTAATCATAATTCTATTCGTTTAATTGTT 44442 30 100.0 35 .............................. TACAACCACGTAATACGTTATATGATAAGATAGCA 44377 30 100.0 35 .............................. TACAACAGAAGGTGGTTTATGCCCGGCAGCAAGTT 44312 30 100.0 35 .............................. TACAACCGAATGGCAAGCTGCCAAAACACTTCGTA 44247 30 100.0 36 .............................. TACAACCTGGCACCAAAGCGGACGGCGCAGCCGACA 44181 30 100.0 36 .............................. TACAACCTGGCACCAAAGCGGACGGCGCAGCCGACA 44115 30 100.0 35 .............................. TACAACAGCTGAGGAGTAGGCAATGTGCCCACAGA 44050 30 100.0 35 .............................. TACAACTCTTATATTTTCATATTGATGTTCGCTGA 43985 30 100.0 36 .............................. TACAACTTGTCTCGTCGATGAGATCAACAACAGAAA 43919 30 100.0 36 .............................. TACAACCGTAGCGCCCAGCGGACGGCTTTGCCGACA 43853 30 100.0 36 .............................. TACAACAATCGACAGCGGCAAAGATATTATCATATA 43787 30 100.0 35 .............................. TACAACAAAGAATATCATTATAAAGAAATTGATAA 43722 30 100.0 35 .............................. TACAACCACGTAATACGTTATATGATAAGATAGCA 43657 30 100.0 36 .............................. TACAACTGATTTATGGTGACACTATTTCAAAGCAAA 43591 30 100.0 35 .............................. TACAACTCTTTCAATTAGTTAAAGAAGGAAGAGAA 43526 30 100.0 35 .............................. TACAACACAATACGCTACTACATTATTTGCGAGTA 43461 30 100.0 35 .............................. TACAACAGCCGTTTGCGTGCGCTTGGTGCAGACTA 43396 30 100.0 35 .............................. TACAACAGCAAATCAACATACATAATTACTGCAGT 43331 30 100.0 35 .............................. TACAACAGTCAGGCATTCGAAGATTGCGTCAACGT 43266 30 100.0 35 .............................. TACAACGCAACGTGGGCAGCCACTATAAGTTCAAT 43201 30 100.0 36 .............................. TACAACTTGGGCAATGCCAAAGTAAGCCCGTGCGGC 43135 30 100.0 35 .............................. TACAACTTATATGTATAACTAAAAGTATTAAATTA 43070 30 100.0 35 .............................. TACAACCTCGTATGTGACTTTCTGAAGGTCGCATA 43005 30 100.0 35 .............................. TACAACGTGCTTGGGTGATTCTCTGACCGGTGGCT 42940 30 100.0 36 .............................. TACAACCATCGCTCATCATGCGTGAGGAAGTGGAGA 42874 30 100.0 36 .............................. TACAACGCACAGGCGTACAACGATAAATGCCGATAA 42808 30 100.0 36 .............................. TACAACTTTCCTTCTTACTTACCAGGAAGATGCTGA 42742 30 100.0 36 .............................. TACAACTAACACCAGCAGAACCATTGCCTTGTGGAG 42676 30 100.0 35 .............................. TACAACGGCAATGATGGTACCATCATTAAGCCGCA 42611 30 100.0 35 .............................. TACAACCGGCAAGTCGAGAGCAGAAAACCTCGTTA 42546 30 100.0 35 .............................. TACAACACTAATTTTAAAATCTATACAAATGGATA 42481 30 100.0 35 .............................. TACAACTATGTATGAGTTGATAAAGAAAATCAACA 42416 30 100.0 35 .............................. TACAACATTTCGGGCTACGGCAGCTATTGCTGTAA 42351 30 100.0 35 .............................. TACAACATATTACTTTGATTTTAAGTTTCCGTATG 42286 30 100.0 36 .............................. TACAACACATTCACCCTTGACGCATGGTTGTGATCG 42220 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ==================================== ================== 36 30 99.9 35 GTTGTGGTTTGATGTAGGAATCAAAAGATA # Left flank : ATATTATTCTGGAGAAATAAAAAAACTTTCCTTACCTATTATGACATGACTGAAGATAGACTAAATGCTTATCATATAATGTGGTTATTTGTGTTTTTCGATTTACCTGTTACTACGAAAAAAGAGATGAAGGCTGCTTCTCTTTTTCGTAAAAACTTAGAGAAAGATGGTTTCTCTATGATGCAATTTTCTGTCTATATCCGTCATTGTGCATCAAGGGAAAGTTTGGAAGTGCATGTAAAACGGGTAAAATCTTTGCTTCCGGAGGCAGGAAAAGTAAGTTTGTTAAGTGTAACAGATAAGCAATATGGAGATATCTATAACTTCTGGGGTAAGCCAATAAGTATTAATAAGAGTAAAATATCGAAAAAAGTTATCAGCGAACCTATTCAATTGGAGTTTTTTTAGTACTTTTGCAATAGAAATTATATCCTGCACGCCATTTCTTATTAGAAGAAGTGATTGATATATGTTGTGAATCAGTATGTTATATTCTATAG # Right flank : TATAATGTGGATATATGGGGGCAAATGTTTTGGGGCATATGCCCGTGGTTATCATAATACAATCGTATGTAAGGAAGAATTTTTCCCCTACGTACTTCTCCTCTTTCCATGAGAGAAGAAAAAACTGAACCAACAGAAGTGTTTTCTGGGGAGATTTTGGACGAAGGTTTAAAGCGTACAAAGAAAGTGTTGAAGAAAATAGAAAACGGCTAAAGTACTCAGTAAAACTATTCTTCGGAACTAAGAAACACCATTTGCTCAATAGATAAGAAAAACAATGCTGATGTGACGATAAGGGCCAACACGCCGTAGATTGGGGATTGTTGGCACTGTATCCTATGCAGGCAACCCAAACAACGAAGGACAACAAGGCTGTTGTCCCCCAACGCTCATATTTCTTAGAGTGCTTCGGGGGGAGTATCTTCGCCTACTACTTCAATGCTAACGATTTCTACCTTAATTTCATGTTCAGGCTTGTTCGATTCTTCGTTTTTGTTTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAATCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //