Array 1 81892-82312 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV814399.1 Corynebacterium sp. HMSC072D12 Scaffold79, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 81892 36 97.2 28 ..................A................. AACCCTTCTGTCTGCCGTACAATTGCCC 81956 36 100.0 28 .................................... TCACCCGCAGCCTCATCACCCTCGACCT 82020 36 100.0 28 .................................... GGCATCCCAGACGTCCGCATCGTCCGCC 82084 36 100.0 28 .................................... CTGGGCGCACTCGTCGCAGAGCAAGGCT 82148 36 100.0 28 .................................... GGCACCTTCGACGCCGCAATGCAGATGG 82212 36 100.0 29 .................................... GGCAGGCACATGCAAACCATCCCCGAAGG 82277 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 7 36 99.6 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : TGGCCACGAACTTGATCTCTGAGCGGGAGTAGCGGTCGTGGCGCGCACCCGCGCGCTCGGCCAATCCCTGGTAAATGCGGCGCTTGCGCAGCAGTCCATCACGAAGTGCGAGTGCCTCCATCAGCGTGATCTCATCGTCGAACGCGGTAGCCGTGTTCGTGGCGTTGATCGCGATGACGAGCTCATCGATGCGCTTGGTTACGCCCTCCAGCTCACGGAGGAGATCCGTCGGGTTCTCATCCGGTTCATCGCCTTCCTGGATGCGGACGGTTGCCGCGAGTCGGTCACTCAGCGAGTTGAGGCGCTCCTGCGCCTGAGCGCGCTCGGCCAAGGCTTCAGCAAGTAGCATGATTCCTCCTTAAGAAGTTAGAAGAATTAAGCTAGGGCTACGGCGCTTCGCTGTCAATAGATGATGAGATCAATTTCAGAGTCTTTGCGACAATTCGACTTTCCGCGTCCCTGGAAATCCTTCACTAAGCTATTGATAGCAGGGTAGTGAG # Right flank : CCGAAGCAGCCCTAGAAGGCGCGACCAACGCTGGGGTTCAGTTCTCATTACCCCTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGTTCTCATTACCCCTGATAGACTTCCAGGCATGACCCTTAACAACGACGAGGTGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCTCGGACGCACATTTGACTATGCGCGATAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCTTCAGTGCAGAAGAGATTGCTCAGATTCAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCGCCGCCGCGCTCTGGTGTACGCCGACGGGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCAGTGTGGCCCCAAAAGGGTCGTTTAACTGGAGTTTATCGGTGATCCTCCGCTAGAAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,1.15 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 2 82526-82754 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV814399.1 Corynebacterium sp. HMSC072D12 Scaffold79, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 82526 36 100.0 28 .................................... TCGGACGCACATTTGACTATGCGCGATA 82590 36 100.0 29 .................................... TTCAGTGCAGAAGAGATTGCTCAGATTCA 82655 36 100.0 28 .................................... GCCGCCGCGCTCTGGTGTACGCCGACGG 82719 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 4 36 100.0 29 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : GTTCAGTTCTCATTACCCCTGATAGACTTCGGCATCCCAGACGTCCGCATCGTCCGCCGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCCTGGGCGCACTCGTCGCAGAGCAAGGCTGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCGGCACCTTCGACGCCGCAATGCAGATGGGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCGGCAGGCACATGCAAACCATCCCCGAAGGGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCCGAAGCAGCCCTAGAAGGCGCGACCAACGCTGGGGTTCAGTTCTCATTACCCCTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGTTCTCATTACCCCTGATAGACTTCCAGGCATGACCCTTAACAACGACGAGGT # Right flank : CAGTGTGGCCCCAAAAGGGTCGTTTAACTGGAGTTTATCGGTGATCCTCCGCTAGAAAATCGTGAGCTGAGGTGGGGTATTCTCCATTTCGGAAGGCTCTGATTTGGAAAAGCGAATCGCTTTCGACCATTGAATATCAGTGACGGATATGATTCTCACATCTCCGCCTTCTGGTAGACCAGACTTGATTTGCTTGACGGTTGTCGCGATACGGGAGGCGAGGGGGAAATACTGAACGTAAACGCTTAGTTGGGATCTACAAAAGCCAAGGTCTAAGAGGTGGTTTCGAAACCGGTTGGCCTCTCTGGTTTGAATTCTTGATTTAACGGGAAGATCGAACATGACCACGCACCACATTGGTTCACTATCTTTCGCCGGCATCGAGTTTTCCTTCCCAGACGGGAACGTTTAGGTGTTTTAGATTTCCCTCGATATATAGGCCATATTGTTGGCTGAACTCATTAAAAGCTGTGCTTAAGGATTTTCCACTGGAATTGAAG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //