Array 1 45011-43787 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYRE01000011.1 Streptococcus agalactiae strain GCH51 11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45010 36 100.0 30 .................................... TCGTAAAATGATAAGTAATACAATAACACT 44944 36 100.0 30 .................................... TTGGAAAGATGGCAGAGGGGTTAACGCAGC 44878 36 100.0 30 .................................... TTTTGAGTTTTCAACTTATAGAGTGTATTT 44812 36 100.0 30 .................................... ATCTGGAAGCGGTCAAGAAAGCCCAGTATG 44746 36 100.0 30 .................................... ATGGTCAGAAATCGAAGAAAACGAAGTCGT 44680 36 100.0 30 .................................... TAAGAATTTTAGATACTCTACTTGAATGCT 44614 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 44548 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 44482 36 100.0 30 .................................... CCAGTTTAGAAACAGAACAAAACTAACGAA 44416 36 100.0 30 .................................... AGACAAAGAAGATGGCAAGTCTATCAACAA 44350 36 100.0 30 .................................... ATGTTGTAGAATCATATCGACCATATAACC 44284 36 100.0 30 .................................... GCTTGGTCTCGAAGAATTACAGAAGAACAT 44218 36 100.0 30 .................................... ACAAGAAACAAACAGCCTTGATGACTTAAT 44152 36 100.0 30 .................................... GGGTCCAAATCAGCAATCTATGCTAAAAAT 44086 36 100.0 30 .................................... CAACCCTATGTTTGATAATATTTTAGACGT 44020 36 100.0 30 .................................... AAGTGAAGTTGAATTTTATTTGAGATACTA 43954 36 100.0 30 .................................... TTCTATCTTCTGAAGATATTTCACAAGTGA 43888 36 100.0 30 .................................... TCTTCTTTTTAATTCTTCTAACACTCCATC 43822 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGA # Right flank : ATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //