Array 1 395056-396016 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP013651.1 Streptococcus sp. A12 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    395056	    36	 100.0	    30	....................................	ATTATGGCCTAATCGGTCTGATATCTCTTT 	
    395122	    36	 100.0	    30	....................................	GAAACTTTGGGCACACGCTAAAGGACAAAT 	
    395188	    36	 100.0	    30	....................................	AATTGGGATTGGGATAAAGTTATCTCAGAA 	
    395254	    36	 100.0	    30	....................................	CGAGGCCTTGGCCTATAGAGCGACACTGAC 	
    395320	    36	 100.0	    30	....................................	GTCCAATAACTGTCCTACCAACCATAGAAT 	
    395386	    36	 100.0	    30	....................................	CAAACCCTGACTAACAAACTTATAGAGCAA 	
    395452	    36	 100.0	    30	....................................	GGGTGGGAGCGGTGCTAGCACAGAATTAAA 	
    395518	    36	 100.0	    30	....................................	CTCCATCCTCAGGAAAGTTACGTTTTAACA 	
    395584	    36	 100.0	    30	....................................	AGCAAATTTTTCTTCATTAGCAAGTCTTTG 	
    395650	    36	 100.0	    30	....................................	TAAGAATATGGACGGCATCTTAGCTGATCT 	
    395716	    36	 100.0	    30	....................................	TGTACTCGCACTCGAGAAGCATTGGACGCT 	
    395782	    36	 100.0	    31	....................................	CCAGTGAAGCCAAGCTAGCAGAATTTAGACA	
    395849	    36	  97.2	    30	............................T.......	AGAAATCTGGAAACGTGCGCGTAAATGGCA 	
    395915	    36	  97.2	    30	.............A......................	CCTAGATTTCTCCAAACCGTCGGCAATCGT 	
    395981	    36	  97.2	     0	...................................T	|                              	
==========	======	======	======	====================================	===============================	==================
        15	    36	  99.4	    30	GTTTTAGAGCTATGTTGTTTCGAATGGTCCCAAAAC	                               	       

# Left flank :   ATCAATTGAATGAAAAACCAGAAGTGAAGTCAATGATAGAGAAATTAGTCGTGACGATCACTGAATTATTAGCTTATGAGTGTTTGGAGAATGAATTGAATCTAGAATATGATGAAATCACTATTCTAGAGTTGATCGAAGCGTTAGGTGTTAAAGTAGAAACAATAAGCGATACTGTATTTGAAAAGTGCACGGAAATTGTACAAGTTTTCAAATATCTATCTAAAAAGAGACTCCTTGTTTTTATAAATGTTGCTGCTTACTTATCAGAGAAAGAAATTGAATGTTTAATAGAATATATTAGCTTAAATCAATTATCTGTCTTATTTTTAGAACCAAGGCAAGTATACAATTTTCCACAATTTATACTAGATAAAGATTATTTCTTAAATACTGAAAATATGCTATAATAGCAGTAATGACGGGATTCAGACGGACTGAAGTCTAGCTAGGACCAATAGCGCGATTACGAAATTTCGTAAGAAAAATTATTCTACGAG
# Right flank :  TGCCTTCAATAATTTGCAGTACTCAGCAGCCTCTATTACCCGTAGTCATTTATTGTTTTTTTAAGCTTTTATTGTTACAATATCCATATAGACAAAAAGACTGGGATTCCAGCCTTTTTAATTGTTTTAAAGAAAGGTTTTTTATGAAACGCAAATCGATTTTGTTTCTATTTTTATTCTTGCTCTCGATTGGTCTGGCCTATGAGACGCAGTCTATCACAGCTGGTTGGATGACAGGCAGTCAGTATGGGATCATTGGTATCTCTGTCCTCTTGCTCCTAGTTTATGCGATTCCTGCAGTTTGGGCTCTCTTTCATTTCGCCAAGAAGTGGAAGTTGTCTTGGATTCCGGTTCTTTTTTCTCTTCTAGGTGGGGGCTTTATCGCAGGTTGGCTGTCAAGTTTTGCCAATACCTATTTCCACGAGATGATTCAAGCGGTAGCGCCAAATAGCGATTTTTGGAACCAGTATGAGAGTGCCATCGCAGGACCACTCTTTGAG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTGTTTCGAATGGTCCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.90,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//