Array 1 688674-688044 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVOP01000001.1 Enterobacter sp. EGD-HP1 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 688673 28 100.0 32 ............................ CTTTTTTTTATGGGGATAAGCCTGGCCTTCCT 688613 28 100.0 32 ............................ CTTCATGTACCATCCCTATGTAGACTTTTCGG 688553 28 100.0 33 ............................ CTAACAACACCTCGACCAATAACCGCGTCAACT 688492 28 100.0 32 ............................ AGCTTCGCGGCCAGCACGCGATAACCCATGGA 688432 28 100.0 32 ............................ TTTGACGTCACCAAAACACGCGACGACGTCAG 688372 28 100.0 32 ............................ TGAAGGAGATAGAGAAGAATGGTTGAACCGAA 688312 28 100.0 32 ............................ AGACGCAGGCCGAGGCGGTTGGCGATTTCGTC 688252 28 100.0 32 ............................ TCAGGGTAACCTTGCCGCTTTCGGCGTTTCTG 688192 28 96.4 32 ...........C................ ATCATCTTGAGTGGCCCCCAGCGCTCAATCAG 688132 28 96.4 32 ...........C................ TGGTAAATCTCTGGTATGCCGCCTTCACCGAT 688072 28 100.0 0 ............................ | C [688047] ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAAACGTGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTACGGCGGGCCACGTTACGTTCGTTAATCCCGGTGACGCGCAAAATGTCCGCTTTCGACATTGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGCCGCATACCCCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCGGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTACCTCCGGATTCATGTCATTTGTCATGTGTAAGTATAGCCATTTGTCAGGGGGAGTGAAATGAGTGTTTTGTATGCAGGAGGTGATGAGAAGAAGGCCGTTTGACCCTAATTTTTAGTGTATTTTTAATGTATTGATTTTAAATGAATATTTTGGTGGGTAAAAAAGAGGGTAAAAGAGGGGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGTGGGGATATTATTCCA # Right flank : ATAGAAAATAAGGTCTCATCCCCCTTACTCTCCACACTGTCTAACAGATAGCCCTAAAGCTGAAACGAACGGCCAAATAATTGTTCAAATAATCAACTGCACCACAAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTGCACTGCCGCACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 699394-698162 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVOP01000001.1 Enterobacter sp. EGD-HP1 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 699393 28 100.0 32 ............................ ATGGCGCAACCCGGTGTGCACGGCGAGGATCC 699333 28 100.0 32 ............................ TCCTTCAGCAGCTGGTCAATCAAGCCCACTTC 699273 28 100.0 32 ............................ AACCTTCTTCGCGCGCCCGTTCTTTGTGACAA 699213 28 100.0 32 ............................ GATAGTATGTAAAGAGAAATCACGATGTTGTT 699153 28 100.0 32 ............................ ATATTTCCATCCGCCATTAGGTGCAGATAATT 699093 28 100.0 32 ............................ AGTAGGAATACCAAAATAATCAGCAATATCAC 699033 28 100.0 34 ............................ CCATACATCGGATAGTGTGGAGTGTGGTGATCAA 698971 28 100.0 32 ............................ TGTGTCATCCCTGAAATCACCGTGCACAATAG 698911 28 100.0 32 ............................ TGCAAAAGGCCAAGTTCTACGGCTCTGGGAAC 698851 28 100.0 32 ............................ TAAATCACCTCCAACTGCCATAGTTTTATTAA 698791 28 100.0 32 ............................ AATAGAAGTATTAAACAAATGTAATATTAAAT 698731 28 100.0 32 ............................ GACAAGCTGGCTAAGGATGGATACAGCCCTAT 698671 28 100.0 33 ............................ AGCCCATCCCGCGAATGTAAAGACGAGGGTAAA 698610 28 100.0 32 ............................ TGAAATCAGGCCTAAGGGCATTGTCTCCTTCC 698550 28 100.0 32 ............................ TTCAATAGTACCGGCTTTTGAAAGAATCGCTG 698490 28 100.0 33 ............................ CACGAAGCGTACATGTTCGACGATAATTGTTTC 698429 28 100.0 32 ............................ TCCTGCTGCGGTGCTGCTGGCAGTAGCATCCA 698369 28 96.4 32 .............T.............. TGGGAACAGGCGAAATTACCTGTTGATGTAGC 698309 28 96.4 32 ............G............... AGGAGGGGAAGCAAACTCAAGCTCGTTACCCT 698249 28 85.7 32 TC.........G........T....... GAGACAGCTGCGCTGGCTCGGTGGGGAGCATG 698189 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================== ================== 21 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAACCGCGACAACAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGCGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTGCGCATTCGATGGCCGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATCCAAGGCGTCAGGGGCGTTACTCTGACGCCATTGGTTTATACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATGGTGCGGATTTACGTTCCAGAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCATTCCA # Right flank : AAACTACCCTTCTAAAACATTCATCTTATCTATTTAAACCTTAATACCATCAAACTCGCACCCTCTATTTTTCACAATAAATAAAAAATCTATTCACGCACAAATTATATTCTAACCAATATATTTTTCGTAAAAATAATGCATTAAATGAAAAAGTAATTTTTCGCTTTATTATCACGGCAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGTGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTAAATGGTGGGCGCGTTGAATATGTCACCCAGGCAGGAAAAGAGTCATTTTACTGGAATATTCCCATCGCTAATACCACAGCGGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCGATGCGGGAGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 715712-714423 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVOP01000001.1 Enterobacter sp. EGD-HP1 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 715711 28 100.0 32 ............................ ACAATGTAGATTGTTTAACTTCGTATGTGTCA 715651 28 100.0 32 ............................ GACTTGTCGTAGCGCTTAGCTGAAGGATCGAA 715591 28 100.0 32 ............................ CCTGGGCTTTGCGCTTGCGCTTAATTTCGGCA 715531 28 100.0 32 ............................ TGTGGCTTGAGTGGCCCAACGCTATCTAACGC 715471 28 100.0 33 ............................ TTTGCTGTAAATAAAGCTGAAAAGCACCTGCAA 715410 28 100.0 32 ............................ TTCCCTGGCCCCGCGGTTAATTGCCTGGGGAG 715350 28 100.0 32 ............................ AGCCTGGCCGCGCTCAATCTCCGGGGTTTGCG 715290 28 100.0 32 ............................ ATGAGAGAGCTATTGGAAAATAGCTTTGCTGA 715230 28 100.0 33 ............................ CTGGAGCTACCGTTTAAATGACTACTACGATTG 715169 28 100.0 32 ............................ CGAACAGGCGCCAGCGTCCTTCTTCTGTGCGC 715109 28 100.0 32 ............................ CGCAGACCATAAACGCCATTCCGACATTCATC 715049 28 100.0 32 ............................ TGAAAAGTGAAGAGACGGCGGCTCCGGCACAA 714989 28 100.0 32 ............................ ACTACGCCCGCGGCTTCCTCGTCGCCCATTAT 714929 28 100.0 32 ............................ GCACAAAATTACGTCGCAGTCGCGGCAACTAA 714869 28 100.0 32 ............................ ATTGCTACCCGGTTGAAAAAATTGTTCACGCG 714809 28 96.4 32 ...........................A TATATGCCACTGCTGAAAATTATATCCACCCT 714749 28 89.3 32 ...T................A......A ACGGACAGCCAACAGGCGTGCCAGTTCGCGGC 714689 28 96.4 32 ...........................A TGAAAGGCATTACAAATCTCAAGATTGGAAAT 714629 28 96.4 32 ...........................A CAGAAGGGGGAGAGGCGAACAGCCTGCACGCC 714569 28 96.4 32 ...........................A ATCTCATTACTGGGCAGCCACATCATTTACGC 714509 28 92.9 32 ..........................GA CAATCCGTAACGCGGTATACGTCCACGTCTCC 714449 27 82.1 0 ..T..................A.-.C.C | ========== ====== ====== ====== ============================ ================================= ================== 22 28 97.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAG # Left flank : CGGTTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAGAAAGGGTTGCCCGGATTTATCGCCTACGGCGTATTGGTTGGCGAAGTGGTGGCACCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGGGAAACACTCGCCCTCGATAAGGTAGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCTGTTGCATTTTTAGGCGCAGGGCGGTTTGCGGTAGGGAAAGCTCCGGCGTGGCGGTGAAAGTTGGATGCTGGAATGAAAGAAGGGGTCTACGGACCCTTTTTTATTGGTGATTTTTAAGTGGTTGATTTTATTGTGCTGACTTGTATGTCATGAAAAAAGGGGTTAAGGGTGATTTTTTAGGGGAATTCTTTATCTTACAACGTGATAGGTGTAGATTGTTCCA # Right flank : AATGTAGGTCGGGTAAACGTAGTGCCACCCGACAAAAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGATCGAACGTTTAACGCTTATGCGAGGACCAGATCGCCCTGTGGATGACACGAGCAGGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGTCAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTCGTCTTACAGCAGCCGCACAAGCCCGCGCGGCAGGCCGCCGCTACCGGTACCTTGTTGCTTTCCAGTGCCTCCAGCAGCGTGGTCCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTTAACGCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGTGTCACGCCAAGCGCCTTCACCTCTTTTTCGACGATATCCATGTACGGTGCCGGGCCGCAGGTCATCACGGTGCGAGAAGCGACGTCCGGCACGCTTTGCAGCAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //