Array 1 2403608-2408222 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042429.1 Corynebacterium nuruki S6-4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2403608 29 96.6 32 ............................G GTCTGGTAACGATGGCGTACCCCGGCTACCTG 2403669 29 100.0 32 ............................. GCAGACCCGACACACAGCAGGCCGATGCCGAT 2403730 29 96.6 33 ............................A CTGTTCCCGTGAGAGTGCGTCAAATTTGCGTAA 2403792 29 96.6 32 ............................T CCTGTGCAATCCCATCCGCGTTCAGCTCCGCG 2403853 29 100.0 32 ............................. GACGGGGCAATGGACCTGGCAGACAGTGAAGC 2403914 29 96.6 33 ............................G GCTGCGATGGCTGACGCTGCGGTGAAGATCGTG 2403976 29 100.0 32 ............................. AAGCAGACGAACCAGTGGGAGGACGGCGAGGC 2404037 29 100.0 32 ............................. ATCGCGGCGCAGTGGGACCGCGTGCGCGAGGC 2404098 29 100.0 32 ............................. GTGAGCTTCCCGCAGGGTGTGAACATCGTCCA 2404159 29 96.6 32 ............................G GCCGAGGAGGACGGCACTCTCGAGCAGGCGCG 2404220 29 100.0 32 ............................. AACCCGTCCGGGCCGGTCGTCGCACACCTGGG 2404281 29 96.6 32 ............................G GAAGTCCGGGTCGACACCGGGCGGCCTTGTGC 2404342 29 100.0 32 ............................. GACGCCGACAATGCGCCTGCGGGTGGCCTGTC 2404403 29 96.6 33 ............................A CGACAACCAGCGCATGGCGCGCAACGGTGACTT 2404465 29 100.0 32 ............................. GATCTGATCGAAGCGGGCTATGTGGAGCGGGT 2404526 29 96.6 32 ............................G CATGAGTGATCTGGTTCAGGAAGTCCGAACGC 2404587 29 96.6 32 ............................G CAGCAGACGCTGAAGCAGACGACGCAGCAGCA 2404648 29 100.0 32 ............................. GAAGTGCAGATGTGGATCAACGAACAAACCCA 2404709 29 100.0 32 ............................. CGGTCGGGGGCGAGGGCTTTGCCGCGGGCGAG 2404770 29 96.6 32 ............................T CCGAAGGCTGTGCCCTTGACGGACGCCATCGC 2404831 29 100.0 32 ............................. GCCCTCGGCGGACCGTGGGGTGTCGTCATCGG 2404892 29 100.0 32 ............................. TCCTCGGATGGAAGGAACCATGACCCGCACCC 2404953 29 100.0 32 ............................. TCGTCCAGGTCCTCGTTGCCGCCGGCCTCATC 2405014 29 100.0 32 ............................. AACGCAAAAAAGACCCCCTAGCGCCAAAGCGC 2405075 29 96.6 32 ............................G TGCTCGGCTTCCCCGCGTCGGCAGCGCAGGCG 2405136 29 100.0 32 ............................. CTCGACATTATCGAGGACTATCTCATGACCGC 2405197 29 100.0 32 ............................. GTCGAGGATCACAAGTTGCGCCATCCGGTCGC 2405258 29 96.6 33 ............................A CGGGTCCACCTCCAGCGCCTGGTCGATCCCGTC 2405320 29 100.0 32 ............................. TCCGTGGCAGGAGGCACTCCCTGACTCACTTC 2405381 29 100.0 32 ............................. TCGCGCTGTTCCCCGTCCACGGTGACCTGCCA 2405442 29 100.0 32 ............................. TGACACCGAGGCGCCGGCACGCGTCCGGTACA 2405503 29 100.0 32 ............................. GGCGAATTCCACGGCTTCGACACCGAGGCCGA 2405564 29 100.0 32 ............................. TGCTGCACAACAAGTGCCTGGTTGTGAACGAG 2405625 29 96.6 32 ............................G CCCGCGCCGAGGTGGAACGCCTCACCGCCGAG 2405686 29 100.0 32 ............................. GGAGGCCACCTGTATGTGAGACTAAATAGGCC 2405747 29 100.0 33 ............................. CCCGTCACACGCGCCATATCAGCGACCGTCAGG 2405809 29 100.0 32 ............................. GAGACCTCAGGCTGCTAAGGGCATTGCGGCGC 2405870 29 100.0 32 ............................. ACCGACGCTGTGGCCGCCGACCTCCTGGTCGC 2405931 29 96.6 33 ............................A CTGGGCTGCGGCGTTTTCTCCGAGGGCTTCCCA 2405993 29 96.6 32 ............................G CAGTAGGTATCCACGCTTTGTGGGCGGCGAGC 2406054 29 96.6 33 ............................T GAGCCGAATGATCGGATGTTCACCCCTTACTCG 2406116 29 96.6 32 ............................G CAACCTGACGATCAACCATCTCCGCCAACGGA 2406177 29 96.6 33 ............................G GAGAAGCACAACCCGCCGAGGAAGTTCCGCAAT 2406239 29 100.0 32 ............................. AATCTCTTCCCGGATTACGTCCAGAATCCGTG 2406300 29 100.0 32 ............................. GTTCACTGGGTAGACCTCTCTCGTAGTCACGT 2406361 29 100.0 32 ............................. CACGATCCGTGAGACGACACGTTCGCCAGCAT 2406422 29 100.0 32 ............................. CCGTGCCCGTCATGCCACAAGGTAACCGTCTC 2406483 29 100.0 32 ............................. AGGGTCAGTCACCAGTTACCCTATTCATCTCG 2406544 29 100.0 32 ............................. GGGGGACGCACCGACCCCGACCTCCTGGAATA 2406605 29 96.6 32 ............................G GGCATTGACCGGTTCCGCGAGAAGCACGGCGC 2406666 29 100.0 32 ............................. CGGAACCACCGTCCACGCAGTGGCGCTAAAAA 2406727 29 100.0 33 ............................. GGGATCGGGATCTGCCACGACTGCCACGATTAC 2406789 29 100.0 32 ............................. AGGCACTCCGATGCGCCGGTGACCGCGAGCTG 2406850 29 100.0 32 ............................. TCCGACGAAGACCGAATCTCGCCCGCATCCAC 2406911 29 100.0 32 ............................. TGGCAGCACTGCGCACGCATGGTGTTCTGCGG 2406972 29 100.0 32 ............................. GTCACGTCGTTCATGACGGCGGTGATTGCCTC 2407033 29 96.6 32 ............................G CACATAGAGCCTGTTGCCGCCCCACTGAGAAT 2407094 29 100.0 32 ............................. AGTGCGGGGCGGGCATTCATCGCCGTGGTTGC 2407155 29 100.0 32 ............................. CGGCCGGACTCGGTGACGTAAGCGCCGGTCGG 2407216 29 100.0 32 ............................. GGTGACGGGGATGATGCCCCATCCGGATGCCT 2407277 29 96.6 32 ............................G TCTCGAGCAACTGGCATCGTGACCATGTGTGC 2407338 29 96.6 32 ............................G CATCCACCATCACCCCGATGTACCTCACCCGA 2407399 29 96.6 32 ............................G TCCCTGTACTACATCGGCGCTGCGGTCGTCGC 2407460 29 96.6 32 ............................G CCCGCGCAACCGCCCGCCGCAACGCGGAACGG 2407521 29 100.0 32 ............................. AGCAGCAGGCCCAGCAGCAGATGGCCCAGATG 2407582 29 100.0 32 ............................. CCGCTCGTCGTCCCTGACGGGTGGAACTACCG 2407643 29 96.6 33 ............................G CACGACCTGGATGCCATGCTCGGCGGTGGTGCC 2407705 29 96.6 32 ............................G TTCAGGTCGACGCCGCAGCCTCTAGCCCGTGT 2407766 29 96.6 32 ......G...................... ACGGGTCAGGGTGCGCAGGTCCGGGTCGGACC 2407827 29 96.6 32 ............................G TACCTCTGGCGGGCCGGGCGGAAGGGCGAACC 2407888 29 100.0 32 ............................. ACGTCCCACGCCGACACACCCAGAGCGGCCGT 2407949 29 100.0 32 ............................. ACGCTCGCAGCAGTATCCGACGCCATGACCTC 2408010 29 93.1 32 .................T..........G GCCGCCCAGGCGCACGAGGACGCCGCCAAAGC 2408071 29 100.0 32 ............................. GCGTCCGGCACGCCGGCGATGATCGTGGTGGC 2408132 29 96.6 32 ............................T CCGATTCGGCGTCGCCTGATAGGTCGCCTGCG 2408193 29 96.6 0 ............................A | T [2408218] ========== ====== ====== ====== ============================= ================================= ================== 76 29 98.6 32 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : CGACGTCGTCCAACTCTGGGATGAGAAGGACCACAGTGTGGTCGGAGGGATGAACTACAGCGACGATGCTGCTGACCACGCGGTGGAAAGCCCGGATAGGCCATGATGACGCTGGTCCTTTCCGCATCGCCGGCTCAGCTGCGTGGGCAACTCACCCGATGGTTGATGGAGGTGAGCCCCGGTGTGTACGTCGGCAGAGTCAGCGCTCGCGTCCGTGAGGAACTATGGCTCCTGGTGACCAGCAACATGGATTCGGGCCGCGCGGTGATGACCTATCCGACGAACAAGAATGAGCAGGGTTTCGTCGTGGAAGTGCATCGCGGTCAATGGACTCCAGTGGACATTGAGGGGATGACGTTGATGAAGCACCCGTTGACAACAGAGAAGGGCGCGATGAAGGCGGGGTGGTCGCGTGCTTCGCGGTTGAGGAAGGCTGCGCGACGGAGACGAAACTAAGGTAAATTCGGCCGCTGGGATCGATGATGTACTGGTCAACAAGG # Right flank : ATAGCCTCGGCGACTGCCGGAATCCTCCTGCCGCACTTCGTGCGTAAGCAGACGCGCACCGCCTCTGCCGCTGCCCACCCGCCACGCGGCAGCCCCGCCCGCACACAGCAAAACCCCCGCAGTCCAGACGATGGCTGCGGGGGTTTTCCGTCCGGGCGGCAGCCCGGAGGGGTCCGTCAGTTAGACGAACAGGCCGGCGACGGCGTCGACGAGGCCGGTGATGCCGTCCTGGAGCAGGCCGACGACGGTGGTCAGGAAGGTGGAGATGGTGTCGATCATGATGGATCCCTTTCAGTGGATTCATGGTGAAAGGCGCAAGGTTTCACGCCGCTGATCAGACAAACGGGGTGCCGGCGGGATTGTTACGCTCCTTGCGGCAACTACCCCCGTCATTCACCCCTGACCCGGCGACTGTGCAGGTCACAGACGGAAAACCGGCCCCGGACGCGAGGTCCGGGGCCGGGCTGCAGGGGGAGACTGTTACACGAACAGGCCCGCGA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //