Array 1 213636-214383 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMX010000002.1 Vibrio metschnikovii strain M16X Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 213636 28 100.0 32 ............................ TTTTACCGCCATGCTTCTTTTGGGATGCTTTA 213696 28 100.0 32 ............................ CAACTCGCCCTTCAAAGCGCTTAGTTACTGAA 213756 28 100.0 32 ............................ CATGAATTCGCGCACCCGTACTTTAATCGTTT 213816 28 100.0 32 ............................ TTCCAGAAGGGGCAACTCAACTAAAAGGGTGT 213876 28 100.0 32 ............................ GGACAGGTCAGCACTCAGCTAACCAAGTTATT 213936 28 100.0 32 ............................ GAAAGGAATCGGCCCCGTAGGGGAGACGCCCA 213996 28 100.0 32 ............................ TCTTTTTATCCTAAGCTCTGTTAACCCTGACT 214056 28 100.0 32 ............................ CATCTAGGAAGTGGGCGTTTGGATTACGCTTA 214116 28 100.0 32 ............................ ATTATTTTTAAACTCATATTCTTTAGCGTCTT 214176 28 100.0 32 ............................ ATTATGATTTGTTGAGGTTCTAGCTTTTGTCC 214236 28 100.0 32 ............................ TTACTGAGTTATTGATGTTAGGTAACTCTATC 214296 28 100.0 32 ............................ TTTCGGATTCCTCCGTGGCTATCTTTAGCCCA 214356 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCCGCGCTATGGGCCGAAAAATCCGGTAAAACGCTGGTGGAATGCCTAGCCGATTTGCAACAAAGCAAGCCGACAGCCTTATGCTCTTTACCGTTTATTTACTTGCATAGCCAGCAAACGAAGCAGCGCTCTCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGCAGCAACAAAGCACATCGCAAGACGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCAACCGTCCCGTATTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAAGTTACAAAGGGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGAAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 275-543 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMX010000061.1 Vibrio metschnikovii strain M16X Scaffold61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 275 28 100.0 32 ............................ CCTGAGTGTAAGCGGCTTATGAGAATGCACGC 335 28 100.0 32 ............................ TCACACAACACAAGATTTAAAACGATAGCCAC 395 28 100.0 32 ............................ AAACGCAATCGAAGCCTACAACGAACGGCTGC 455 28 100.0 32 ............................ ATATGCGCTTCATCAATAACAAAGAGCGGCCC 515 28 100.0 0 ............................ | A [538] ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AGAATGCTAACAAAGCATTTAAGAGGGACAGCCAACGCGTGGCATTTTTATTATGCGTTAGTTTTTGTGATTACGGTGTTATGCGGTGAGTTGGTAGTAGCGTTGGCTGCCCCTTAATGCGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATTG # Right flank : TTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGTTGAATAAGGAGGTTTCGTGGATATTTTAGGATTACTATCGGGTGCTTTAGTTCAAGTTTGGTACATCATACCTCTGTTACTTATCGTTTCGAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 37658-38165 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMX010000015.1 Vibrio metschnikovii strain M16X Scaffold15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37658 28 100.0 32 ............................ TTTCAAGGGTTCCTTTATTGCATCAGACTCAT 37718 28 100.0 32 ............................ TGACAGGTCAAGATTTAGTTGATCTCATGGAG 37778 28 100.0 32 ............................ CTAGATTGCTTGCGGCTTTCACCATGATAGTT 37838 28 100.0 32 ............................ TTGCAAGCCAGCCTTTGCCTTCCGAGGGTATC 37898 28 100.0 32 ............................ AGCTTCAAAACGCGCAAGATTGCGAGCAAAAT 37958 28 100.0 32 ............................ AAGCGCCGATAAACGAACCCGCTAAAAAAGTT 38018 28 100.0 32 ............................ AGCATCGTGCCATTAACGATATAAGGCTGTTG 38078 28 100.0 32 ............................ CCGAAATAAAAAAGCATTTCGAAGCGTCTTTT 38138 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AATAGATTAGGGTGAGTTTTATTATGAAAGACCACATACTGCGTTATCCAATGTATATAAGATTCTATAGTTTTGTTAGCATAATACCTGACTTGCATATATTCCTTTACGCTAAGTAAAAATTGAGATTTCATAAGACAATCCTTTGCTGTTTTTATATACAGTGCTATTGGTTTTGTGAGCTGTCAATAACTAAGTGGCACTTTACCGTTTATTTAGATCTGCTTCTCATTGCGATGGTGTATAAAGTGATGAATTAGATGGTTATTATGCTACGATTGTTCGACCTTTGAACTAAAAAGGTGGCGGTAGCGTGGAAGAAAAGACGGCATGTTTCAGTGTAATAAGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATAAGCCTGATTGCGCTCAATTTTTACTACTAAGCTTGACAGGTTTAGAGCTTTTTTATTGATATACTGATTACATAGTAAATAATTGGATTGATTCTTTTGCTAAGACAAAGAGCAAAACTCTTTTCACAGTTAATAATAAGGTTAAAAATGTACGAGTTATCAGTGGTCAAAACTAAGCATGTTGCAGACCATATATTAGAAATTGAATTTAGTGATAAGCATGTTTCTGTCGTCGATTTTGCTCCTTTTATTTTTGGTAATGGGCATCCTGATTATGACAAGTATAAAGATTCTTCCCAATTCTTAACGTTTCAATTGTTGGATGGTAATTTAAATTGGGATGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //