Array 1 37767-37211 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB903850.1 Mycolicibacterium hassiacum DSM 44199 A3G5DRAFT_scaffold_18.19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 37766 36 100.0 36 .................................... ATGGCAAGGCATGCGCGCATCCTCGAATACGGCTCG 37694 36 100.0 40 .................................... CTGCGTCGAAGACGGGCTGATGGAGTCCGCACCGAATGGC 37618 36 100.0 40 .................................... CCGAAGATCGGGTGCACCCCGGCGGCTCGGCAGGCCTTCT 37542 36 100.0 37 .................................... CAGCAACAACATTGCCGGACGCAACCGTGGGCTCATA 37469 36 100.0 35 .................................... CTGACGCAGCCGCCGCACCTCATCAGGGTCCATCC 37398 36 100.0 40 .................................... CTGGCGAGCACATCGTCCAGTTCGGCGAGTTCCAGATCGG 37322 36 100.0 40 .................................... GCCGGTACTCATCGCGCTTGTCCGGCGGGGTCTCGTCGAT 37246 36 97.2 0 .................C.................. | ========== ====== ====== ====== ==================================== ======================================== ================== 8 36 99.7 38 GCTGCAATGCGGCTCCGTCTCAGGGACGGAGATCAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CGAGTGAACCGCACGTGATCGGGTTGGAGGGATGACAGCTGCAATGCGGCTCCGTCTCAGGGACGGAGATCACTCGTTCGGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCGCGCGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCAATGCGGCTCCGTCTCAGGGACGGAGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 291-549 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB903866.1 Mycolicibacterium hassiacum DSM 44199 A3G5DRAFT_scaffold_32.33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 291 36 100.0 37 .................................... TGTAGTTGATGATCGTGGTGCCGTTCATCGTCACGAT 364 36 100.0 40 .................................... GCCCTACTACGGGCTGAACGCCGACGGCAGCCCCGACGGG 440 36 100.0 38 .................................... CCGGGGGTACCGAACCATGTTCCGGCCGAGTCCTTCTC 514 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 4 36 100.0 39 GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Left flank : CGTTTGAGGACCAAGGTCACCAAGGGGCCCGGATCACGAGCGGCCGGACTAGCGATGGCCTACAAGCTCATCGACGCCGCCGCGGCCCGCTGGCGTGCCGTCAACGCCCCACACCTGGTCGCCCTGGTCCGCGCCGGCGCGGTCTTCCATAAAGGCAGACTGCTCGAACGACCCACCGACATCACCCCGCCAACATCGCCCTCAGACGGCGGTCAGCACGCCGGAACGGAGGTCGCCTGAAACACCCCGATCCACAGGTATTGACAATTCCTCTGATACCGGCTGCATACG # Right flank : CCTGCGAGCCAAAAATACCATGCCTGGCCTGCGGTTTTGTCCCCTCGGCGCGAGGGCTCGCCACTTCGGAGAGCACCTTTGTGGTTTCCGAACGAGCTATGCGGCCGAGGAGACTATCTGACCTGCGATTTCTTGACGCGACCGCTGGCGGGGATTTCTGCAGCGAGGCAGCCCTCGCACATGTCAGATAACGATCACCGACTGGTCCGTGATTGGTCGAGTGCGCCCGATACAGACGAAGCGGTCCTCTTGTATGGCGGAAACCAGGCCCAGATCGCAAAGAAGTACCGAGTCTTCGCTCGCTTCGATGATCTGACTCAACTCGTGGCGAAGTCGCCGCAGCTTCGCTGGGCTGGCATCAACGACGAACACGCTGTACTGGACTCGATCACCGTAGGCCTGCAGCTTGTTTGAGAGTCTCGATCGCCGCTGGTCACTCGGAACGTCGTATGCGATAAGGAATCGCCGCGCGTCTTTTCGGGTCATCTCGTAGTGATACC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 296-446 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB903869.1 Mycolicibacterium hassiacum DSM 44199 A3G5DRAFT_scaffold_35.36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 296 29 100.0 32 ............................. TTCAATGGCGGCGGCAGTGCGCAGGCGTATGT 357 29 96.6 32 ............................C GTGCTGTGCCAAGTCGTGAAACCCGGGCCGTG 418 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGCTCCCCGCGCAGGCGGGGGTGATCCG # Left flank : GAGCAGCTTGATCCGACGCCGGGCCTCACGCAGCTCACCGGACTCGCTGGTGGTTCTACCGGGCTTGGTGCCCTCGTCGATGTCGGCCTGGCGAAGCCATTTGTGCAGCGTCATCGGGTGCACACCGAAATCGGTGGCGATCTGCTCGATCGTCACACCGTCTTCGCGGTTGCGGGCCACGCGCACGACGTCGTCGCGGAACTCACGGGGATAGGGCCTTGCCATGGGGACATCCTTCCAGCCTGCCCACGCTGGACAAGCCAACTCAGATGTCACCTGTTCGTGCAGCAGACCCG # Right flank : ATCCCTGGTTTCAGCGCTCAACGGGCTCTCCCGCTGGCGAAAATGGTCACCCGCAGCTTGCGTTCCTCCCGTCCAGTTGGCCTGCCGCGCCTTGTGCTCCGTGCCGACGCGCTGCACGATATAGTCGCCCTTATCGAAAACGCAACGGGATGTGTTTCAGGAAGTGGCCGATGACTGTCGCGGGATCAGATCAGGATGCCGGGGTGGAGTTCGATCCGTTCTCCGCCGAGTTCTACGACGATCCGCACGCCATCTATCCCCGACTGCGCCGGGCGGCTCCGGTCTACTACAGCCGCAGACACGACTTCTACGCGCTGAGCCGGCACGCCGATGTCGCTGCGGCGTACAAGGACTGGGAGACCTTCTCGTCGGCCTACGGTGAGGACCTGGGCATGGTGCGCCGGGGTGAGAATCCGCCGGCGAAGATGATCATCTCCATCGATCCGCCCGAGCACCGGGTGATGCGCAGCCTGGTCAACAGGGTCTTCACCCCGCGGGCG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCAGGCGGGGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //