Array 1 103361-102537 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAIGS010000005.1 Streptococcus pyogenes strain K40818, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    103360	    32	 100.0	    34	................................	TGCCACGAATGGTGCGAGTAGGTGGGATTTGAAG  	
    103294	    32	 100.0	    35	................................	AAGAGCTTATAAAGCAGCTCGAAAAATCCTTGAAC 	
    103227	    32	 100.0	    33	................................	AATGCTGTGGCAGGTTTTAATATCGATTACCAA   	
    103162	    32	 100.0	    36	................................	GGTGCTAAAACAGTTGTTTGGAACGGACCTATGGGG	
    103094	    32	 100.0	    34	................................	TTAACACCGTCCGTTTTAGGATTTACAGGAGTCG  	
    103028	    32	 100.0	    34	................................	AAAAGATAGCTGATTATTTCGGGTTAATGAAATC  	
    102962	    32	 100.0	    35	................................	ATGAGGACACAAGTAAGTCCTGACAACAGCACTGC 	
    102895	    32	 100.0	    35	................................	GATTTGGACAATTGGTAGAAGAGTGGAAGACATCA 	
    102828	    32	 100.0	    33	................................	ATGAATTGGATAAGGTTTGCCTGATAGTATTAA   	
    102763	    32	 100.0	    33	................................	TGCTACAAGTGACTTGTCATTATTCTTTGTTAA   	
    102698	    32	 100.0	    33	................................	GAGATGATTATAACAAAAAAGTCCGACGGGAAG   	
    102633	    32	 100.0	    33	................................	ACTTTGGTAATGCGACACCTAAAAATTATGCGG   	
    102568	    32	  93.8	     0	.....G.........................G	|                                   	
==========	======	======	======	================================	====================================	==================
        13	    32	  99.5	    34	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                    	       

# Left flank :   AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTAACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAAAACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  ATGAACCCGACCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGCGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCATTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA

# Questionable array : NO	 Score: 9.23
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//