Array 1 4137471-4138537 **** Predicted by CRISPRDetect 2.4 *** >NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4137471 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 4137532 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 4137593 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 4137654 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 4137715 29 100.0 32 ............................. GTCGCCGAAGCAGTTCGCATCATTCGACCGGA 4137776 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 4137837 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 4137898 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 4137959 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 4138020 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 4138081 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 4138142 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 4138203 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 4138264 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 4138325 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 4138386 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 4138447 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 4138508 28 82.8 0 ..................TCC...-C... | T,G [4138526,4138536] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : CGTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4141681-4142747 **** Predicted by CRISPRDetect 2.4 *** >NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 4141681 29 100.0 32 ............................. GTCACCGCCGTCGACATGAGCGACGACCTGAC 4141742 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 4141803 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 4141868 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 4141929 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 4141990 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 4142051 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 4142112 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 4142173 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 4142234 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 4142293 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 4142354 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 4142415 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 4142476 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 4142537 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 4142598 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 4142659 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 4142720 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 18 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCCCGCGCCTTCCTCCATCACCGCCTCACCCACAAAATCCCACCCCGGCTCACCACCGACCATGCACAACCCCCCGCCCCCACCCGCCGCATCCTCATGGAATGCACCGACTGCGGACGCCCCGGCCCACCGGAAGCCCTCCCCGACGGCCTCTGTCACCCCTGCCGCACAACCCACACCGCAGACCCCGAAAACACACCCCACCCCGCCGACATCGCCGACATCAGGGCCCACATGAGCAACCTCCGCAGCCTCCTCAAACCCGTCTGAGCTCAACAACCCGCCTGCCTCACAGCCCCGGCACGGACAGGCCTCAGCGAGGTGCACCGACGTCCTCCTTCAAGAGGCCGCCTCTCGCCGCCTTGGAAGGGCAGAATCACTCCCGACACGCTTAAAGCTTCGAGCAGGCCTATGCACACCAACCAGAGGGCGATATGTCCATTTCTCGGGAAGTTGTCAAAAAGCACCACGCGCCTGAGTAAACCCGCAGGTCACGGACT # Right flank : CATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4152730-4154037 **** Predicted by CRISPRDetect 2.4 *** >NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4152730 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 4152791 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 4152852 29 96.6 32 ............................T CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAG 4152913 29 100.0 32 ............................. ACCCCCTGACCCCCGGGCTGCCCTGTCGCCCC 4152974 29 96.6 32 ............................T TCGGCGGGGGTGTTGATCGGGGGCCCGTGCAT 4153035 29 100.0 32 ............................. ATGCCCCAAGCGCCTATGTGCCGGGTCTACGA 4153096 29 96.6 32 ............................T CCGCGGCGCTCGTACGGCATCCACTCGGCCCG 4153157 29 100.0 32 ............................. TCGGCCTGTGTCAGGCGCCCATGTTTCTGCCA 4153218 29 100.0 32 ............................. GTCCACTCGGGCTCGACGCCTTGTTCGTCGAG 4153279 29 100.0 32 ............................. CGGCCGGACACGTACTGCCAGATCTCCGGGGA 4153340 29 96.6 32 ............................G ATCATCGGCTGGACTACAGCCGCTTGGGACTG 4153401 29 100.0 32 ............................. TGGACGCTCAGCAGGGGGGACATCGGCGTGAG 4153462 29 100.0 31 ............................. AGGCCCTTGTGGGCCTCTTGTTTCGTGATCC 4153522 29 100.0 32 ............................. CTGCGGCAGATCGCGGGCTCGTGGACCGTCCC 4153583 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 4153644 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 4153705 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 4153766 29 100.0 32 ............................. TTCTCCGGCGCCGACCAGGCCCGCACCGTCAT 4153827 29 100.0 29 ............................. GGGGGCAGCCTGTTCCCGTACGCCGACGC 4153885 29 86.2 33 ..C...T..C..............A.... CCGAGGACGGACGCGCGGGACTTGGTGCGGCCG G [4153890] 4153948 29 93.1 32 .............A.......G....... AGGTCCCGGCCGCAGTAGTCCTCGACGAGCCC 4154009 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.1 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : GCCGCAGACGGTCAGGCCCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTCGGGCGGCTCCCGCTCTCCCGCTGGACGCCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTTCGATCGCGGTCGCCGCCGCCCGTCGCGCTGCGGTCGGCGTACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGAAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGACGCATCAGTGAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //