Array 1 33281-29949 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAUU01000017.1 Endozoicomonas acroporae strain Acr-5 Endo._Acr-5_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33280 28 100.0 32 ............................ CGACAAAGGTCCCTTTTGCCAGGGCCGCAAAC 33220 28 100.0 32 ............................ ATATTGCCACCGCTGCCACAACTGCCACTTTG 33160 28 100.0 32 ............................ TGCCACCAGTGCCAATAGAGTTATTTTTGTTC 33100 28 100.0 32 ............................ CTGCAGGAAGACAGTGCCGGACAGGTGCTGAA 33040 28 100.0 32 ............................ TTTTATTCGATATCACATAGGTGTCGCTGGCA 32980 28 100.0 33 ............................ CGTAGGCGGCGATCACAGCCGCCGTTGACCTCC 32919 28 100.0 32 ............................ TGAGTTCTTTTCGCTTTGTCTCTGACAGCATC 32859 28 100.0 32 ............................ TGTGTCAGATGCCGAAGGTGTTCACCCAGGCG 32799 28 100.0 32 ............................ TTATTGAACGGTGCTCTGTCATGGTTTCGGGA 32739 28 100.0 32 ............................ ATTGGCAGACTGAACAACGGCATCAGGTCGCT 32679 28 100.0 32 ............................ TGCCTCAAGGGAAATGCTGGCAGGAAGAACCA 32619 28 100.0 32 ............................ TGGAGGCTGGCTTGCGCTCACAGGGCGTGGTC 32559 28 100.0 32 ............................ TCATCATGACGGGTGTCCCCATTGGCACATGT 32499 28 100.0 32 ............................ GTGAATTGCTGGTTTCTTTTGTCCAATGTTAC 32439 28 100.0 32 ............................ AATTATACAGCGTGGGAAAACCGCCTTATTGA 32379 28 100.0 32 ............................ AGGTGAGCAGGCCAATAGCGGCGCACTGCCAC 32319 28 100.0 32 ............................ GTTTCAGAAATTATCAGCACCTGGGCGCCAGC 32259 28 100.0 33 ............................ AATAAAACCGAGCTATCTATTACCCTGCTCTCC 32198 28 100.0 32 ............................ AACAAAGTTCTATTTGATTTTTTGCCCCTACA 32138 28 100.0 32 ............................ AGGAACGTTATCCAGATTCTGGCTCTGTTGCT 32078 28 100.0 32 ............................ TCAAGCTGTTTTTTGGGTGCAGGATAGACATA 32018 28 100.0 32 ............................ AAGAGATTCAGCAACGTCCCTGGCAACAAACC 31958 28 100.0 31 ............................ CCGGGCGCGAAAACCCAGAGCAAACGCTTCA 31899 28 100.0 32 ............................ TGGCGGGGGTAATGAACTCATGATGAGCCTTT 31839 28 100.0 33 ............................ CATACGGGTATCCATCGCCTTGGCCGCTGTGCG 31778 28 100.0 32 ............................ TGGTGTTGCTAAGTGGGGTTACGGGAAAGTTA 31718 28 100.0 32 ............................ ACAACTATTGTTGCTGCCATCACTGCTATTGC 31658 28 100.0 32 ............................ ATGCCCCCATCATTAATAGGCCCGCCATCATC 31598 28 100.0 32 ............................ AACATTATGAAGCTGGAAGGAAAGCCGCTGGT 31538 28 100.0 32 ............................ TTAGACGACGGCAGACTGTCAGCTTGCAATTC 31478 28 100.0 33 ............................ CTTAAATCGAATTTAAATACGTTTCACGGTGGT 31417 28 100.0 32 ............................ TGAACAGGCATTAGAAGGAACCACCATCTACA 31357 28 100.0 32 ............................ ATCAAGGCATTAAGTTCAGCGGTCACGGTGGC 31297 28 100.0 32 ............................ AGATTCAGGGTCTGTTGCTGACTGTTATTCTT 31237 28 100.0 32 ............................ AGTATGGCTTGCTGTTTGGCCGTATTGGTATC 31177 28 100.0 32 ............................ ATCCAGGGCACTGCGGATCTGCATCTGACCCT 31117 28 100.0 32 ............................ GTACAGGTAAGTCCGCAATTGCAGACAAAATA 31057 28 100.0 32 ............................ CGCCATCGTGACAGGCACCAGCCCCCAAGCTG 30997 28 100.0 32 ............................ TGGTTCAGTCGTTTGGCTTCAGCCTGGGCGGC 30937 28 100.0 32 ............................ GTTATTGGCGTTGTTGCTGGTTTGGCGGTTGT 30877 28 100.0 32 ............................ TTGATATCAAGGAATCAGAAGGGAATAGATAA 30817 28 100.0 32 ............................ CGTTCAGAGCATTCAGAATGGCGCTCTGTTCC 30757 28 100.0 32 ............................ ATTCAGGCATTGCAGGATAAACGCACACAATT 30697 28 100.0 32 ............................ TTCCTTCCCTGGCGCACCAGTATGACGGATTG 30637 28 100.0 32 ............................ TTGCCACCGACCAGGCAGATGCGTTTATAGAG 30577 28 100.0 32 ............................ TGCCGTTGCTCGCAATCTGGACCCGAGTGACA 30517 28 100.0 32 ............................ GTTTTGAAACACCCAAGCCTCAGACAGCCAGA 30457 28 100.0 32 ............................ ACTCTACAGGCTCACACCGTCGCCCATTCCGG 30397 28 100.0 32 ............................ TATCAGTGTCAGCGGTTAGCGGCTAACGATTT 30337 28 96.4 32 .........A.................. TGCTCAAAAGAAATCGGGCTGTCACTGGTTCG 30277 28 100.0 33 ............................ ATGGTGGGCTGATACTGGGGCTTTGATTGTTCT 30216 28 100.0 32 ............................ GGTCTACTGGAAGGTAGCCCCGAACCAATACC 30156 28 100.0 32 ............................ CAACCGGCAAACACCATCTGGAAGGTGTAGCT 30096 28 100.0 32 ............................ GGTTTCGGTACGGTCGGGCACATCGGCCACCA 30036 28 96.4 32 ....................T....... GCCACCCAATAACAACACCCTGAGATGGTGCA 29976 28 96.4 0 ......................C..... | ========== ====== ====== ====== ============================ ================================= ================== 56 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AGGCAGGTGGTATTGGCAATGGGGATATTCCAATACTGGTTATTATTTTTGGCTTCGGTGAGATAGAGCACCCGACCATCTTTCTGCATGATCCGGCACTTTTCCAGGTAATAGATATTGGCCCTTTTTGAATGCAGAATCGCCTTGAGATCAGTCAGCACTTCCATTGTGAGATACTCCTGTGCTGAACTCTGTTGTTCATTTTACGCATCAGATACTGACGGGTAGCAGAGATAAAGCGAAACGATGCTTGTATTTTGATCAACTTATCTGCCTTGTTTTGCAATTTATGCTGCCCAGCTGGCAGGGTGAACCTTAGTGCATTGTGCCGGTGAGTGAATATTGATTCAATTGACCTGAGTTCTATATTTCACCCTTTTTTTTGGGTAAAAAAATGGAGCTTATAAATCAAGTGGTTACAGATAGTGTTATTTTTTGGGTCAAAAAGCCTTTTTAGAGTTCTATCCCTTTAAATACGGGGGAGGTTATACTCAAAACTC # Right flank : TGGCAGAAGGCGACGGCGAGCCCTGAAGCGGTTTAATGACTTAGGACACCTCATTAAGCACAATAGTGCCATTGATGACGAAGTAGAAAGTGACAAAGCAGCGTAAGAATTATTCTCCGGAATTTAAGCGTAAAGCCATTGCTATGCTATGGTAGTTGAATAGGGGCAGGCTGCTACAGAAGTGGCCAGAAGTCTTGGTATCCATTAACCTAAGACGCTGGGTACGTGAGCAGAATGAAAAAAAGGAAATGTCTTTTCCTGGCAAAGGGCAGCAAGCTCTGACGCCTGATCAACAGCGAATAAAAGAGCTGTAAGCTGAAAATCGCCAGTTGAAAATGGAGCAGGAAATCCTCAAATGCTGGTCAAGCAAATATTAGGTGATTACCTGAAACCTGAAAATCTACGGGGTACCGTTCAAACAGACCCTGAAAAAGAGGAAGACTTAATCGTCGCCTTTTCTGTCTGTATTGAACAGGTTGAGGAAAAATATTGGATGGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 42443-47560 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAUU01000017.1 Endozoicomonas acroporae strain Acr-5 Endo._Acr-5_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================================================================================================================================== ================== 42443 28 100.0 32 ............................ ACCACAGAAATCGCTTATAAGTTGGATACTGA 42503 28 100.0 33 ............................ CAACAGAGACTTATTGGCCACATCCAACAGGAT 42564 28 100.0 32 ............................ CGGAAGGTGAAATCAATGCTGATTTTCACCTC 42624 28 100.0 32 ............................ ACAGAAAAAACCCGCCTGATAAAGATCAGAAA 42684 28 100.0 32 ............................ ACAAATCTTAGAAATAATCTGGTCAGAGGTCA 42744 28 100.0 32 ............................ GTGAAGGTTAATTTTATTGGTGCTACTCGTCG 42804 28 100.0 32 ............................ TGGGAATCAGGGCGGGTACTGCCGCAGAGCAA 42864 28 100.0 32 ............................ AAGGATCTGGACCTTGAGTTTGTGCATTCTCC 42924 28 100.0 33 ............................ CGCCAGCTCTGACAGAACAAACGCCTCACCGTA 42985 28 100.0 32 ............................ CTGATACCGTATTCAGGCTGAATAAAGGTAAT 43045 28 100.0 32 ............................ ATCACAGGCCGCTCGTCTGGACCGTCAGCAGA 43105 28 100.0 32 ............................ AGAGCCGCCCAAGTAGAGTGTGTGCTCATTTT 43165 28 100.0 32 ............................ GGAAGCTTTCAAACTGTCGGCAGACAACTTGA 43225 28 100.0 32 ............................ CGGAACGAACCGCGCTTGATGCCTGCTTTCAA 43285 28 100.0 31 ............................ GGAAAGCTCCAGTTCAGTTTTTTATGAATAG 43344 28 100.0 32 ............................ AGCATCACTGGCCGTGTACTGGAAGGATCATT 43404 28 100.0 32 ............................ ATCCGCTGTTGACTCGCTAACAATCACTGGAG 43464 28 100.0 32 ............................ AGTCTGGATGAATCAGAACGTCAGCGACTCAG 43524 28 100.0 32 ............................ GGGCCAAACGATCAAAAGCATGTCGTTCATAA 43584 28 100.0 32 ............................ TGCAAGGGCAAACACGTCTGGCCGGATGGCAA 43644 28 100.0 31 ............................ CCAAACATGAACACGACACAAAGAAACTGAC 43703 28 100.0 32 ............................ ATAACCCCATTTAGCAACACCAGGCAGAATTT 43763 28 100.0 32 ............................ ACATGAGAAACCACCATAACAGGTGTAATGAG 43823 28 100.0 32 ............................ ATATTGTCCCGCGCCATCAATCACCGGCGTTC 43883 28 100.0 32 ............................ TCCAGGCTTGCACGGCTTGCGACCGTGGCAGG 43943 28 100.0 32 ............................ TGCGGGCGCTGGATCGGCTGGGCAGGGCGCAC 44003 28 100.0 32 ............................ TGGCAGCTACGCCCCTCATCCCGACACTGCAC 44063 28 100.0 32 ............................ GAAATACTTTCTGGCGGCGGTCTCGATATCCC 44123 28 100.0 32 ............................ ACCCACTCCGAAAACTTGGGGAACTTGCTCAG 44183 28 100.0 32 ............................ AATAACAAAAGTGTCTGAGGGATTATTATGAA 44243 28 100.0 32 ............................ CTGTTCTGTCACGTACGTTTGAACCGGTTTTC 44303 28 100.0 33 ............................ TGTTTCATCTGCAATGGGAAAGTAATTCCCTGT 44364 28 100.0 32 ............................ AATGACATAAGAACCCCAAATAAAAAGGGGGA 44424 28 100.0 32 ............................ TATCATCGGTTTTCTCTTGCTTCTGGACGATC 44484 28 100.0 32 ............................ TGATGGGCAGTGTGCCATGCAAGGAGCCAACC 44544 28 100.0 33 ............................ ACAGTGTTGCCGACCTGCCCACGGGCACTACAT 44605 28 100.0 32 ............................ GTCGATAGTTCCGCAATATTGCTTAGAGCCGG 44665 28 100.0 32 ............................ AAACATCAGGCGACAAAGATAGAATAGATAAA 44725 28 100.0 32 ............................ TGCCCGTGTTCCGCCACGGCTGCGACTGCCAC 44785 28 100.0 32 ............................ TCTTTAGTTAGTGAGTGAGTGATCTAAATAGC 44845 28 100.0 32 ............................ AAATTATGGGGCGTTTTACTGAAGGCTGTAGA 44905 28 100.0 32 ............................ GCTGTTAATGACAGCCTGAAACGCCAGAACGT 44965 28 100.0 32 ............................ TCCATCTCTTCCGCCAGCACCAGGTAGTCTTC 45025 28 100.0 32 ............................ AGAATGGCTGGGGGTGCAAGTGCCGGGTCCGC 45085 28 100.0 32 ............................ GGCAGGCCGCTTTTGATCCTGGGCATATGGAT 45145 28 100.0 32 ............................ AGAAAAACCATTTTTATCGACAGCATGACCGT 45205 28 100.0 32 ............................ TGGCTGAAAGTTGGATCGAGGGATGACTCGTT 45265 28 100.0 32 ............................ ATAAACTCTTCGAAGTCTTCGCACTCATCCGC 45325 28 100.0 32 ............................ AGTAGAGGAGGCCGCCACGATCCAACCGCCTG 45385 28 100.0 32 ............................ TTCCCGAGGGTGGTATTGTCGGCGGTGACCAC 45445 28 100.0 32 ............................ GCTGTTGCTGGCGGTGAACAGCTCCGGGCCGC 45505 28 100.0 32 ............................ TGAGCCAGCCCGAAATCTGGAAGGCTCTGGGG 45565 28 100.0 32 ............................ TGAATACACCGGAAGTCAGCTTGATCGGCATG 45625 28 100.0 32 ............................ TTGCGGCTCTAGGCTTTCCGCCAAAAGTTCCC 45685 28 100.0 32 ............................ TCAAATGCTTTCATTTATGAAAGGCATGATTC 45745 28 96.4 32 ........................A... TGTATCTTTCAGCACTCGCTTAGATGCCCTGA 45805 28 100.0 32 ............................ AAAGAGGTGGGGGCCGGGCTTTACCAGGTCTT 45865 28 100.0 32 ............................ TGCACGGTTACCCGGGCACGATTGCCGGACGC 45925 28 100.0 32 ............................ TCTACCGGTGCGGCAGGAGCGAAGCAGTGAAC 45985 28 100.0 32 ............................ TTTATATAGAGAGGGTGAGCCCTGTTGCCGGG 46045 28 100.0 32 ............................ TGTATCAACACCGGATCAAAGGCAGTTTGCAG 46105 28 100.0 32 ............................ TGTTCGCCCACTTCCAGTGGCCACCAGTCCCG 46165 28 100.0 32 ............................ AGCAGGGTCGGCTTGTTGCCCAGCTTCTTGTC 46225 28 100.0 32 ............................ GCCAGTAGATACCTCTGCCTTTCGGGCTTGCC 46285 28 100.0 32 ............................ TTTGCTGAAATGCCCTTACCGGGACTGCACTG 46345 28 100.0 32 ............................ CAATTCCGGCGCAACGCATCGGGGCTGAGAAT 46405 28 100.0 33 ............................ CGATGAACAGAGAAAGTCTGTGTAGAGATAGAG 46466 28 100.0 32 ............................ GTACAGCCACCTCAGAGCTCATAGGACGGTTT 46526 28 100.0 32 ............................ AAGCGAAGCAGCAAAAATAGCGGGGCTGAAAA 46586 28 100.0 28 ............................ ATCATTGCCTCTTTAGTTAGTTAGTTAG 46642 28 100.0 32 ............................ TTTGCCACGAAAGCCAGCGAGATTGCTGCCAA 46702 28 100.0 32 ............................ TGGAAGACATGCCCTACGGGTACACCTATTTG 46762 28 100.0 33 ............................ TCAATAACCAGGGGAGCTGCAATGGCATCTTAT 46823 28 100.0 32 ............................ GGATGAATACGCAGTGCGCCTTGTATCTCAGG 46883 28 100.0 32 ............................ GTCATCGTAATAGAACTGCAGGGGCTGGAGCC 46943 28 100.0 32 ............................ ATTGGCCCGCGCCCATTTGAAAGCCACTCTAT 47003 28 100.0 32 ............................ TGTCGGGGCGGGTGTGAGTTCAGCCGGATTCC 47063 28 96.4 32 .....................C...... AGATTTTAAGAACTGAAGACTTGGAAGAAAAA 47123 28 100.0 32 ............................ CTAGAGAGTGCTAGGGATTCTTTACGTGATGT 47183 28 100.0 32 ............................ AGTCAGAAAGGAAAGTCTGGCCGGTCTGTCCG 47243 28 100.0 202 ............................ GCAAGCCCTCTGATCCAATGTGCCTAGTACATGGTTTCAATGAGTTTGACGTGTACGATCTCCGTTCACCCTGAGCGGAGTCGAAGGGTGCTTGGCACGATCTATCAGAGTCCGGAGTTTCCGCCCTTCGACAAGCTCAGGACGAACGGAGTGCGGAGGCACGACAACCCGTCAAACTCATTGAAACCATGTACTAGGGCCA 47473 28 100.0 33 ............................ GTCGATTTCTACGACAATGGCGTCTACTTTTGC 47534 27 71.4 0 .......A..T..A..C..-.CCC.... | ========== ====== ====== ====== ============================ ========================================================================================================================================================================================================== ================== 83 28 99.6 34 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TAGAGCGCCATAACAAAGCCAGGGCTGTAGATGGCCAATTTAACAGCTACGGGCTGGCTTTGGATCACGCCACTGTTCCTGAGTTCTAGTACAGAAAAGCGCTAATGCCCATACACACTCCCATGCTTGCGTGGGAGTGCATACCGGAGCCTTCTGGATGTGGAACAATCCATTTCTACCCGGAATCATTGAAGTTAAACGGAGGTTCTAATTTGTGCAGCGGTTCGGTGTGCATTCTCACGGGAGTCCGTGGGAATATGTTCGGAGGGCTTGAACAGCCTCGGGACCTTGGGAATGAGGGTCTGTGTGCATAACAAAGCGCGGCCACATTAATGCCTATAGGAAGCCACTGTCGCCAGCGGCACTCAAAGACCCTTTTTTTTCGCTCTCTAAAAATATATTTACAATCAATGACTTAAATTCACTCTAAAAAATAGGGTGACTCTCCCTTTTTTCGATGGAACCCTTGCAGCAACTACTCTTTGCGCATATTGTCTTTG # Right flank : AACAAGACAAACGCCTCACCACTATCAACAACTTTTTGGATATAGAGGGATGCTTACACCTCCCCCCACAACACCATAAATGGAACCAAATAATCATATTGAGGTCGAAAGGCGGTGTTTATAGCCAAGTGTGCAGGGTTTATCTTGAAAGCGACAGCATTAACTTACTCTCACCCAAAGCCTGTTTTACGGGTTGGTCGACAAACCGGCTCCAGCGGGATTCCTGCCCCCTCCGGCAGCACATTTATCGGTAAAAGAATTTCAAATCTTCAGTCTCACAGAAAGAGAACCACTGCCCCGGATGAAGGCAAATGGATTGAGGATGCCTTTTGGAAAAGAAAACCATTAAACGGGCGTCAAGTGACCTCGGCGGTGGTGCTTCAAGCTTATTATAAATATGACAAGAGCTCTCTGAGGCCTGGCCTCTTCCTGCAAAAACTTTGCTTGCAGAACATTCTACATGGCAATAAAAAGATTACCGCGGATCAGGTCATGCAAGA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //