Array 1 63814-75195 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDMP01000025.1 Nocardioides albidus strain CCTCC AB 2015297 scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 63814 28 100.0 33 ............................ CATCGACTATGGACCGGAGAAGTCCTTCCCCTT 63875 28 100.0 33 ............................ CCGTACGCCGGCCATGCCCACCAGATCGCGACG 63936 28 100.0 33 ............................ CTTCCCGCACGACACCTCGCGCGGGATCCCAAC 63997 28 100.0 33 ............................ CCGTTCGGGCGCAGACTGTCCATATGACGCCCA 64058 28 100.0 33 ............................ CTCGGTCTCCGGGCCGGAGAAGCCGCAGGCCGC 64119 28 100.0 33 ............................ CCGCACGCCTGCGTCACCGCCACGGCCACCGAG 64180 28 100.0 33 ............................ CCGGCCGCGCAGCCGCAGCAGATCAGGATCATC 64241 28 100.0 33 ............................ CAGCCTTGACGGGCGCTGCCCCGCCAGCCGGAA 64302 28 100.0 33 ............................ GTTGACGGCGGCCGAGGTCTGGCGCTCGGCGAG 64363 28 100.0 33 ............................ CCGGCTCGAGCTGGCGTGGGGTGACACCCTCAC 64424 28 100.0 33 ............................ CTGCTCGAGGTCCTCGTCGGGCTTCAGGACGCC 64485 28 100.0 33 ............................ CCGTTCGTCGTCGGAGAGGCTGGTCCAGCCGTA 64546 28 100.0 33 ............................ CAGGCAGCGCCCGACGCTCCCGATCAGAGAGCT 64607 28 100.0 33 ............................ CTTCGACCAGCTCGTCGACCACCGACCGTCCAG 64668 28 100.0 33 ............................ CACCTTGCCCTCCCACGGGCGGCACAGGTCGCA 64729 28 100.0 33 ............................ CGACGACGCGTCGCCGGTGGTCGGGCAGGTCGT 64790 28 100.0 33 ............................ CCCCGGGCACTTCGGGGGGTGGGACCTCATGGT 64851 28 100.0 33 ............................ CGGCGACGCGTCGCCGGTGGTCGGGCAGGTCGT 64912 28 100.0 33 ............................ CCCCGGGCACTTCGGGGCGTGGGACCTCATGGT 64973 28 100.0 33 ............................ CGGCACCGGCGCCGAGCCGAGGATCGAGGTCTT 65034 28 100.0 33 ............................ CGGCGAGGTGACCGGGCGACCGACCGGCTGACC 65095 28 100.0 33 ............................ CACCGCCTGGCAGCCAGCCCTGCGCCCGTTCCA 65156 28 100.0 33 ............................ CTGCGATGGGCGGGACACGGCCCCCGTGCGGGG 65217 28 100.0 33 ............................ CGCGTCCTCGAACCTGAAGTCGTTTACCCGTGG 65278 28 100.0 33 ............................ CGCGGCGTCGCCCATCGAGTCGTTCTCGATCTG 65339 28 100.0 33 ............................ CTCCGGGTCATCCACCAGGAACACGTCACGAGA 65400 28 100.0 33 ............................ CCGGGCCAACACGCAACGGTCGGACCACACGCC 65461 28 100.0 33 ............................ CCTCCTCGCCACCATCCTCAACGTCGGCCGGAC 65522 28 100.0 33 ............................ CTCGTATCCGACCAGCCGCATCCCTTCCTCGAC 65583 28 100.0 33 ............................ CATCACCACCGCCGCCCGCCGAATCACCCGCGA 65644 28 100.0 32 ............................ CCTGTCCGACCCGCACTTCTCGGCGCTGTATG 65704 28 100.0 33 ............................ CTGCGGCTGGGCCGCGGTGGCGGGAACCGCGAA 65765 28 100.0 33 ............................ CACACCTTTCAAGTCCTGACGAAGCGCCACGGA 65826 28 100.0 33 ............................ CTTCTCCCAGGCGGGGGCGTCGCCAGGGGTGTA 65887 28 100.0 33 ............................ CATCACCCGCGCGCTCGTCGACCGCTTCGCCCC 65948 28 100.0 33 ............................ CCGCCACCCTCGACGACGCCACCCTGAAGGTAG 66009 28 100.0 33 ............................ CTGCTGCGTCAAGGATCGCGTCGACCACGCTCA 66070 28 100.0 33 ............................ CCTGCCTGGGCCTGTCGCAGGAGTACCTAGCGG 66131 28 100.0 33 ............................ CTGCCGAGGCGGGCTGATCGGCTGACGCAGGGA 66192 28 100.0 33 ............................ CCCCGATGGGAGAACAACCATGAACATCTACGT 66253 28 100.0 33 ............................ CCGGTTCTGGCGGCCGTCCGGCGCACGGTTCAA 66314 28 100.0 33 ............................ CGAGATCGACTACGAGATGCGAGACACGAAGGG 66375 28 100.0 33 ............................ CGTGGCCGCCGACAGCGCGACCATCAGCGCGAG 66436 28 96.4 33 ................A........... CCACCGTCGCCGGACCCAACGGCCCCGGGGGAA 66497 28 100.0 33 ............................ CAGCACCGGCGCCACCGACGCCCAGATCGGCAA 66558 28 100.0 33 ............................ CAAGGGAGCCGGCGCTGGCGGTGACGGCGGCGA 66619 28 100.0 33 ............................ CCCAGTGGCTCGGCATCCGCTGCTGCTTGTCGC 66680 28 100.0 33 ............................ CGATCCGGCTGGAACCGAGTCTGGCGGCGTGAT 66741 28 100.0 33 ............................ CATGTGGGTGGCCGCCGTCGAACTGCCATCGAT 66802 28 100.0 33 ............................ CCCCTGCGGCTACTCCCCGGGACGCAAGTCCGA 66863 28 100.0 33 ............................ CCCGGGGCGGCACCTCGGCGGCCATGTCCACGA 66924 28 100.0 33 ............................ CACAGCGGACGTGAGGATGAGGACGGCGAACGA 66985 28 100.0 33 ............................ CCGGTGCCGACCAGCGACGCCCAGCCGTTGGCG 67046 28 100.0 33 ............................ CTGGATCGAGACGTCGATCGTCGTGCTCGACGG 67107 28 100.0 33 ............................ CCCGAACAACCCGCCGGTGTCTTTCTGGTTGAA 67168 28 100.0 33 ............................ CCCGTGACGTCACCCCAGCTCTCCCGCGACGAC 67229 28 100.0 33 ............................ CTCGCGTACCACGCGAGCGAATGAGGTGGTGTA 67290 28 100.0 33 ............................ CCTGCTAGCACGGTCCACTCTTCGGGGTTCATC 67351 28 100.0 33 ............................ CCGCGCGGGGTCGGTGTCCCACGACATGCGCAG 67412 28 100.0 33 ............................ CCTGTTTCTCAACTTCACCGGCCCGGGGCTCAT 67473 28 100.0 33 ............................ CACCGGCACCCCGGTCGTCATGTTCGTCTGCGC 67534 28 100.0 33 ............................ CATCGAGACGCATCTGCCCCTCGACGCGGTACT 67595 28 100.0 33 ............................ CCCGCAGATCCGCAGTGTCGTGGTCGACGTCGC 67656 28 100.0 33 ............................ CTGGCGCAGCTCAACGCGATCTCGAAGTCGATG 67717 28 100.0 33 ............................ CTCGATCGACGTGTCCTGGAAGGCCGCCGGGTC 67778 28 100.0 33 ............................ CTGGGCCGAGGCGCGGACCGTGCTCGCTGCGTG 67839 28 100.0 33 ............................ CTCCGCTGGGACCCACGACCGCGGCGGTGTCGT 67900 28 100.0 33 ............................ CACACCATCGACGTGTCGATGGACGAGAACGGG 67961 28 100.0 33 ............................ CCGGTGCCGTGAGACCTGCAGCCGAGCCCACGC 68022 28 100.0 33 ............................ CAGTGCGCGAAGTACGCAGAAAGTGTTGCGAAG 68083 28 100.0 33 ............................ CCGTGCCTCAGCGATGAGAGCCTCGAGCGACAC 68144 28 100.0 33 ............................ CCGCCAGCACCTGCATCGACACCAGCCGACGCC 68205 28 100.0 33 ............................ CCGAGCCAGGGCGTCACGCACGGCCGCGAGCGC 68266 28 100.0 33 ............................ CTCCGCCTGTCCTCACCTAACACCTACGCACTG 68327 28 100.0 33 ............................ CTCGAGCGACACGCGTTCGCAGGCGTGGAGGTA 68388 28 96.4 33 A........................... CAAGTTCATCGGTTGCTACATCGCCGACGGGCT 68449 28 100.0 33 ............................ CTACGGCCGCCACCGCCGCGGGATCTCGACGAT 68510 28 100.0 33 ............................ CCCCGCGACGGCCGCCCGGCACGCCTACCGGAT 68571 28 100.0 33 ............................ CCGCCAGCTGGTAGTTGCGGACGAACTCACTGC 68632 28 100.0 33 ............................ CACGTGGGTGGCCTGGTCGTAGGCGAGCAGCGG 68693 28 100.0 33 ............................ CTGCGCGCGGTAGCCGTCGACGAGCCGCTTCGC 68754 28 100.0 33 ............................ CGTCGCCTTGGACCCGAACAGGTCGCCGCTCGT 68815 28 100.0 33 ............................ CGGGGTCGCGTCCCGTCGCGGTTCGGTGACCGG 68876 28 100.0 33 ............................ CGTCCACGCCAGCGTGTAGGCCGGCGTGGTGCG 68937 28 100.0 33 ............................ CTCCTGTGTAGCGCGCAGGTCGCGGCCGCCCTC 68998 28 100.0 33 ............................ CGGCCACCGCGCGGTCGTTGACAAGGTCGAGAG 69059 28 100.0 33 ............................ CCCGTCCCGCAGCTGGATCGCAGACTCGAGCGA 69120 28 100.0 33 ............................ CCAGGCGATCAGCCCTGCGACGATCCCGATGCC 69181 28 100.0 33 ............................ CTCCTTCGCGCCCTGAGCGCCGGAGCGGAGGGC 69242 28 100.0 33 ............................ TCGTTCGCTGGGCGTGGATTCGCAGCCGAGCCC 69303 28 100.0 33 ............................ CGCGCCGCAGCCCGGCGCCGAGCCGCGCCAGAA 69364 28 100.0 33 ............................ CTGACGGTACGACTCCCACGAGCCGCCAAATCA 69425 28 100.0 33 ............................ CAAGGACGCCATGGCGTGGTCCCAGTCGATGAG 69486 28 100.0 33 ............................ CGCAGGCACCTTCGAGACCCGCGGGACGGTGAC 69547 28 100.0 33 ............................ CTGGCCGTACTCGTCGGTGGCGTCGAGAATGTC 69608 28 100.0 33 ............................ CCCGCTGTGCATGTGGGCGCTGATGCTCGTCGG 69669 28 100.0 33 ............................ CTTGGGGTCGCCGTAGAACAAGGCCAGCTCGTG 69730 28 100.0 33 ............................ CACGGTCCACCGGTCCTTCTTTGCCCAGCGGAA 69791 28 100.0 33 ............................ CCTCGCCGCGACGATCACGGCGAGCGAGGGCGC 69852 28 100.0 33 ............................ CTCGACGGGGAAGACATCGACGAACTGGCCGAC 69913 28 100.0 33 ............................ CTGGCACAGGTCTCCGTCACGAATGCTACGGCA 69974 28 100.0 33 ............................ CCTGCGCCGCAGCTGACCGAACCCGCCCTTCAG 70035 28 100.0 33 ............................ CAGGTAGCCCGGCGGCGCCTTCCGCAGCAGCCG 70096 28 100.0 32 ............................ CACGATCCGGCAGACACCCCGCCCGTGGGACG 70156 28 100.0 33 ............................ CCTCATCAAGGCCTTCCAGGGCCGGTAGGGACT 70217 28 96.4 33 .......T.................... CCATCACGGCAAGGGTGAGCCGAAGTGGCTGGA 70278 28 100.0 33 ............................ CTGCACCAGTTGCCCGCGCGGCACCCACGCCTG 70339 28 100.0 33 ............................ CAAGACGTACAGCCAAGTCGATGCCGGTGTCAT 70400 28 100.0 33 ............................ CCTGGGCGGCGCGTCGAGCTACCACGCGATGCG 70461 28 100.0 33 ............................ CCCGATCGCGCGGATCGGCTCGCCGGTCAGCGG 70522 28 100.0 33 ............................ CTGGTCCGCGCTCGGATGACGGAAGGGGTGATG 70583 28 100.0 33 ............................ CGGGCCCGAGTCCCACAGGTAGCCCGTGACCGG 70644 28 96.4 33 ...............C............ CTCGGGGCGGGCTGCGCAGTTGCAGTTGCCGTG 70705 28 100.0 33 ............................ CGCGGCGGTCGCTTGGAGGGTCCGGTTGTAGAG 70766 28 100.0 33 ............................ CCCGGCGACCGGGGTCTTCACGGTGCCCGCGGG 70827 28 92.9 33 ............GG.............. CTGCGCCAGGAGGGGGGCCTCTTGCGCCTTCAG 70888 28 100.0 33 ............................ CTCGCCGTTGTCGGCGGTGGTGTCGTAGATCGG 70949 28 100.0 33 ............................ CCCCAAGGCGCTGATCCAGGTGATCCGGTCGCT 71010 28 100.0 33 ............................ CGCGTTGGGCTCGAAGATGCGGTCGTCGTCGGT 71071 28 100.0 33 ............................ CCCGGTGAACCCGTCGCGCAGGAACTCGAACAG 71132 28 100.0 33 ............................ CCGAGGGCGGTGCCGAGTGAGCCACTTCATCCG 71193 28 100.0 33 ............................ CAGCCCGCCGAGAGCGAGGCTGGCGCGTCCAGC 71254 28 100.0 33 ............................ CCCGAAGATCACGATGTAGCAGGCCACGGTCAG 71315 28 100.0 33 ............................ CCACAAGTGCATCTCATCGATCACGACCAGGCC 71376 28 100.0 33 ............................ CCTCCTGCTCGTGTTCCGCGACGTGTCGGGGGT 71437 28 100.0 33 ............................ CCACCACGTCTCATCGATGAACAGACAGAACCC 71498 28 100.0 33 ............................ CCTTGATGGCAACCAAGTACGACGGCAAGGATC 71559 28 100.0 34 ............................ CGGGGCGTGGACCAAGGTCCCACTGGACACGCAG 71621 28 100.0 33 ............................ CAAGCCCCTACCTGCCTGCGAGCGCACCGCTCG 71682 28 100.0 34 ............................ CTCCGAGGGCATCGAGGACAACTTCGCCCGCACC 71744 28 100.0 33 ............................ CCTCGCCGTTGACGCGATGGCCGCGGCGACCAG 71805 28 100.0 34 ............................ CCACTTCGCGGCCGTCTCGTCGAGCGGTGCGATG 71867 28 100.0 33 ............................ CTGCTGTTTGGAGACGACTAGTGGCGACCCCGG 71928 28 100.0 33 ............................ CTCGGGCGTCGGGGACCTCGATGAGCACCGGCT 71989 28 100.0 33 ............................ CGTGCCCAGCAGGGTGTCGGGGTCGACGACGAG 72050 28 100.0 33 ............................ CACCGGCCGTCACATCGACGACGCCGGATTCGA 72111 28 100.0 33 ............................ CGGGTGCTTGTCCGTCAGCTGGGTCTTCAGCCA 72172 28 100.0 33 ............................ CCGACGACGCCGGCACCGGCCGGTCGGCGCGCT 72233 28 100.0 33 ............................ CTCGCCCTCCTCCTCGGGGGTGAGGGGCGGCTG 72294 28 100.0 33 ............................ CCGCGACGGCCGGTTCACCCTCGACAACCCGGC 72355 28 100.0 33 ............................ CGGACGGGGCTAAACCCGGGTTAGAGCCGGTTT 72416 28 100.0 33 ............................ CTGCACGACACCGCCGATGCCGAGCACGCCGAA 72477 28 100.0 33 ............................ CTGGGCGCCGGGGTCGACGTCGCCACCGGCGTA 72538 28 100.0 33 ............................ CTTCGCGCTCAGCCAGCCGGTGACGCCGTCCTT 72599 28 100.0 33 ............................ CCGGCGTTGACGGTTTCGCGCCGTAGCGCTGGC 72660 28 100.0 33 ............................ CATCCGCGCCCGGGGGATCATCCGCGCCCTGTG 72721 28 100.0 33 ............................ CCCACGACGTCTGCGCGCCGACGTACGCCCCGG 72782 28 100.0 33 ............................ CCTCGGCTACCTCGACCCCGCCCAATACCTCAA 72843 28 100.0 33 ............................ CAGCGACGAGTTCGCGTCGCTGGCGTCGGCGGT 72904 28 100.0 33 ............................ CCGGCCCTGACCAGCGCAGACGCCAGGGTCCCA 72965 28 100.0 34 ............................ CCTACCACTCAGTGTGCGTCGAGCACGCCAAGGA 73027 28 100.0 33 ............................ CCTACGCGCAGGTGGCCCTCTTGCTCGCCGTCA 73088 28 100.0 32 ............................ GCCCCGGCCAGCCGCTCGGGCCAGGGCCGGTA 73148 28 100.0 33 ............................ CCACGCTGCGGAGCTGCCCCGCCCCCCGCAGCC 73209 28 100.0 33 ............................ CTTCTGCGCCTGGGCGCCGCGCGCGACGATCGG 73270 28 100.0 33 ............................ CGTCCGCAGCGTGGCGTGCGTGTGCGGCGACCG 73331 28 100.0 33 ............................ CCAGGCCGCGACCGGCCTGTCCGCGATGGCGAC 73392 28 100.0 33 ............................ CACCAGGCGAACGTTCCGAGGAGCACTGCGCGC 73453 28 100.0 33 ............................ CCGCAGGCCACCAAGGGATGCGTCGCCCACCTC 73514 28 100.0 33 ............................ CGGCGGCAACATGTCGCTCCTGACGCCGTACTA 73575 28 100.0 33 ............................ CCCTTAGAGCGCGCAGGACCGTTCCGCGCTCGG 73636 28 100.0 33 ............................ CCCGTCCGAGAACGAAGAGTCCACCGAGACCAC 73697 28 100.0 34 ............................ CTGCGACGGGTCCCACTCGTCACCGAAGGGGACG 73759 28 100.0 33 ............................ CCCTCAGCGCGGTAATGCAGAGACGCTGTTCGT 73820 28 100.0 33 ............................ CGCGAGGCTCCCCAGCAGGATCACCGAGAGCAT 73881 28 100.0 33 ............................ CCACGACCTCGCGGCGATGGTCAATGCCGCCGA 73942 28 100.0 33 ............................ CTTCGAGAAGCAGCGCGGCCGCCGCTACCAGGC 74003 28 96.4 33 .......T.................... CGTCGTGTCTCGGACCTGCGCCACCACCGTGTC 74064 28 100.0 33 ............................ CACCGCAGCCACCCGCAGCGACGAGACCGCCCG 74125 28 100.0 33 ............................ CGTGAAGCCGGCGAGCTGACGGAATGACGGGGC 74186 28 100.0 33 ............................ CCAGCAGAAGATGCTCAACCGCACTGCCCGGCT 74247 28 100.0 33 ............................ CACGTACCGGCCCTGGCCCGAGCGGCTGGCCGG 74308 28 100.0 33 ............................ CGACAACTCGTTCATCCGGCAGGCCGACGTCGC 74369 28 100.0 33 ............................ CCGTGCTCGACATGCAGCCCGTCGCCGGCCCGG 74430 28 100.0 33 ............................ CGACTCGCCGCACTGGCCGCACGTGACGGTGAC 74491 28 100.0 33 ............................ CAGGCCAACGTCTTTCGCCACCAGGGACTTGCC 74552 28 100.0 39 ............................ CAGCGCGTCGACGACCTCGACGTCCGCGTCCGCGTCCGC 74619 28 100.0 33 ............................ CAAGCCGGTCGTCGGGCCGGGCGGCGAGCGGGC 74680 28 100.0 33 ............................ CAAGAGCGTCCGGCTGCGCCGCTGGCGCGGCTG 74741 28 100.0 33 ............................ CTGGTGGCGCGAGTTCATCGTCTCGCACTGGTT 74802 28 100.0 33 ............................ CGCGGCGACCTTGTACGAGGTCGACCCGCCGAA 74863 28 100.0 33 ............................ CAGTCGTTATCCGTCTGCTCACGTCTCTGGAGA 74924 28 96.4 33 ......A..................... CCGGAAGCGGATGCGTCAGGCCGTCAGCGGCGG 74985 28 100.0 33 ............................ CAGTCGCTATCCGTCTGCTCACGTCTCTGGCGA 75046 28 96.4 33 ......A..................... CAGCTGGGAGCCCTTGTGGAAGAGCGGGGTGTC 75107 28 100.0 33 ............................ CACGCTGGTGCAGATGCGCCGGCGCGACGTCGT 75168 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 187 28 99.8 33 GTCCGCCCCGCGCCAGCGGGGATGAGCC # Left flank : CCTCCTACCTGATGCGGACGATGACGGGCAGGACTGGAATGTGGTCCACCTGTGGGATGGCGGCTCGCGGAATGTCACCGGCGGAACGTCGTACGACGTCGACGTGCCGTGGTAGTCCTCGTCCTGACTGCCTGTCCAGCAGGTCTCCGCGGCCACCTGACTCGGTGGCTCCTCGAGGTGAGTCCCGGCGTGTTCGTCGGCCAGATCTCAGCCCGGGTCCGCGACCTGATGTGGGCTCGCGTCCTTGAGCTCAGCAAAGACGGCCGGGCGATCATGGTCTTCCACGCCGACACCGAACAAGGGCTGGCATTCCGCGTGCATCGTCACGACTGGCAGGTGGTCGACGTCGATGGCCTATCTCTCATGCTCCGACCCCACGAGGTGGGCGGTCAGTCGGAGCTGAGGCCCGGGTGGAGCAGCGTCGCGAGAGCCCGGAGGGCTCGTCGGCGAAAGTGAATTCGGATCCTGCCGGTGACCGGTATCGTCGCAGGTCAGCAAGT # Right flank : CCAGCTGGGCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAACCTCTGATGGTCCGCCCCGCGCCAGCGGGGATGAGCCCGCGTTCAACGGGCTACCGCCGTCCTCGATCACGTCCGCCCCGCGCCAGCGGGGATGAGCCCCGCTCCGCCCCCACGACCGCGTTCTCGAGCTCGTCCGCCCCGCGCCAGCGGGGATGAGCCCCAACTCCGCGACGCGGGCATCCCGGTCTATGAGTCCGCCCCGCGCCAGCGGGGATGAGCCCGTCTCCGCGTGGCTGTCGGTGATGTAGAGGCCGTCCGCCCCGCGCCAGCGGGGATGAGCCCCGGCCCTGGCCAGCACAAACGTGCAGGTCAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGCCAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 75390-75844 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDMP01000025.1 Nocardioides albidus strain CCTCC AB 2015297 scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 75390 28 100.0 33 ............................ CGCGTTCAACGGGCTACCGCCGTCCTCGATCAC 75451 28 100.0 33 ............................ CCGCTCCGCCCCCACGACCGCGTTCTCGAGCTC 75512 28 100.0 33 ............................ CCAACTCCGCGACGCGGGCATCCCGGTCTATGA 75573 28 100.0 33 ............................ CGTCTCCGCGTGGCTGTCGGTGATGTAGAGGCC 75634 28 100.0 33 ............................ CCGGCCCTGGCCAGCACAAACGTGCAGGTCAGG 75695 28 96.4 33 A........................... CCCGCAGCCGCGGCCGATCTCGTGCTCGCGCAT 75756 28 100.0 33 ............................ CCAGGACGAGACCTTCGAGTTCACCTCCCTCGA 75817 28 96.4 0 ...T........................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 99.1 33 GTCCGCCCCGCGCCAGCGGGGATGAGCC # Left flank : CCAGTCGTTATCCGTCTGCTCACGTCTCTGGAGAGTCCGCACCGCGCCAGCGGGGATGAGCCCCGGAAGCGGATGCGTCAGGCCGTCAGCGGCGGGTCCGCCCCGCGCCAGCGGGGATGAGCCCAGTCGCTATCCGTCTGCTCACGTCTCTGGCGAGTCCGCACCGCGCCAGCGGGGATGAGCCCAGCTGGGAGCCCTTGTGGAAGAGCGGGGTGTCGTCCGCCCCGCGCCAGCGGGGATGAGCCCACGCTGGTGCAGATGCGCCGGCGCGACGTCGTGTCCGCCCCGCGCCAGCGGGGATGAGCCCAGCTGGGCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAACCTCTGATG # Right flank : CCTCCTCGGCCGTCGCCCACGCGTGATCCGGCGGGCCTTCCGCTCGAGCCCGGGCGCCGCGCACCTCAACCACCGGCGGCTTGCGCGAGCCGGATCGGCGATGCTGGGGTCATGCCTCTGCTCGACTCCGCACTCCCCCTCGTCGCGGCGCCCATGGCCGGTGGGCCGTCGACGCCCGCGCTGGCCGCGGCGGCGAGCGCTGCGGGGGCCTTCGCGTTCGTGCCGGCGGGCTACCTGTCGGCGGAGACGTTCGCCGACGACCTGGCGACCGCGCACGCGAGCGGCTCCCCGTTCGGCGTCAACCTGTTCGTGCCGCAGCGGGACAGGGTCGACCCGGCGGCCTTCGCGGCCTACGCCGACGCGATCCGGGACGAGGCCGAGGCAGTCGGGGTCGCGCTGCCGACCGAGCCTCTGCACGACGACGACGCCTGGCGGGAGAAGGTCGACCTGCTGCTGGCCGACCCGGTGCCGGTGGTCTCCTTGACCTTCGGGCTCCCCGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGCCAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [11.7-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //