Array 1 522311-521625 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEDN01000070.1 Enterobacter chengduensis strain GN02587 contig70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 522310 28 100.0 32 ............................ AGGAGCGAGGCCTTGACCTCTGGAGTCAGGTG 522250 28 100.0 32 ............................ ACCCGCTTCTTTAAAGAGCAGTTCTTCACGCC 522190 28 100.0 32 ............................ TAGAAGAACACCGCTCTCACCCATCAATAAAT 522130 28 100.0 32 ............................ ATCGCGTCAGGGCAGTTTAAGGCTGCCGCCGC 522070 28 100.0 32 ............................ CATCCACGTTGCTTGCATGCCTTAAACAGCCC 522010 28 100.0 32 ............................ AGCCGCGCTTCACCAGTAGCGGTTCAAGCGTC 521950 28 100.0 32 ............................ AAATGAAAGTTCTTTGCCAGAGAAATGGCTGG 521890 28 100.0 32 ............................ AGGGCGAAGGGATGCAGCTGGACTGGAAGGGC 521830 28 100.0 32 ............................ AGCAGGTATACAGACGGGCGACCGGATGCGGG 521770 28 96.4 32 .......A.................... AAAGGGATGGATGCCGGACAGCCTGGCGGTAA 521710 28 92.9 30 ..............CC............ ATAGAAAATAAGGTCTCTCCCCCTTACTTT C [521685] 521651 27 78.6 0 C.......T..A....A....C.-.... | ========== ====== ====== ====== ============================ ================================ ================== 12 28 97.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAACTCAATCAGCCGCATCCCCCTGTTTGCAGGTAAACCGGCGTAGCGCCAAAGCGCGTTATCAGCAGGTTGCTGGGCGGGGATCCATGTTCTCATGTTACCTCCGGATTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGGTAGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTGAGAGAAGAAGGGCGTTTGACCCTAATTTTTGGAGTGTTTGTAATGCATTGATATTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTTAAAGTAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGAGATATTATTTCA # Right flank : CGAACCGCCAAATAATTGCTCAAATAATCAACTGCACCACAAAAAAATAAGGCCGGGAAAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGGAT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 532681-532173 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEDN01000070.1 Enterobacter chengduensis strain GN02587 contig70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 532680 28 100.0 32 ............................ GCGCAGGCTGGCTTTGATGAACGTGAAATCGA 532620 28 100.0 32 ............................ GCTGGAAAGTGGCTTATTCAGTTCATTTCGTT 532560 28 100.0 32 ............................ TCTCTCGCACCGCGTGGTGTATGGCCGACATT 532500 28 100.0 32 ............................ ACGAGCCAAATCCAAGGATGTCATATGGGTTG 532440 28 100.0 32 ............................ TGAGCGGCCCCCAGCGTTCAGTCAGTTCGTCG 532380 28 100.0 32 ............................ ACTGCAATGCTACGTTGAAAAGCGAGGGATGG 532320 28 100.0 32 ............................ CGCCCGCATCGAGAGGAGGTAAAAGCCCTAAC 532260 28 100.0 32 ............................ TGGTCGATGGTAGATTTGCGGTTACGAGCCAT 532200 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTCCTCAAACTCAGCCCGTATGCCGTTGCCTTGGAGCTTACCTGGAAGAAGTAAAATCCGGCCTTACAGAATCCATGCGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGGCGAATTTTGACGGCGATATGTTGCCGCACATCACCGGGCTACTCCATGACATTACGCATTCTATGGCCGCAGACGTCGTTGCGCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGGGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGGCGTGACCCTTTTTTTTGGTCTATACGTAACGTATTGATTTGTCTGGTGCGGATTTACGTGCCAGAAAAAAGGGTTTTATGCGTATAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTGGTTTCTTTCCA # Right flank : ACGCGCGGCACTCCGACGTTAACTGCCCCACACCACCCTTCTCAAACCAACCCACTCTAAAATATTCACCAACCCAATTTAAAACCTCATCCTATCAAGCCCGCACTCTCTATTTTTCATAAAAAATAAAAAACTCATTCACAAACAAATTATATTCTAACGAATATATTATTCGCAAAAATAACACTTCAGCTAAAAACCTGATTTTTCATCGTATTCTCACGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTTTATCCGTTATTCGCTAACATACTGCGCATTCAACACCCTGAAATAAAAGCCCTTGCCATGCCCGTAAACAGCATCACTCCTACAGAATTAAAAACCATTCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAGAAATGTCGTGTTCAGGTGAATGGTGGACGTGTTGAATATGTGACTCAGGAAGGGAAAGAATCATTTTACTGGAATATTCCCATCGCGAATACGACTGCGGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 550386-549877 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEDN01000070.1 Enterobacter chengduensis strain GN02587 contig70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 550385 28 100.0 32 ............................ AGCAAAAGCGGAAGTTGATGCCACTTCCCCTG 550325 28 100.0 32 ............................ GCCGCAGGTAAACAATAGCGGCCCGGTAAATA 550265 28 100.0 32 ............................ TGTAGAAGTCGTGCGCAAACCAACTGAGTACG 550205 28 100.0 32 ............................ AGCGCGGATAGATGAGGAAACAATCGCCTGAC 550145 28 100.0 32 ............................ GTCACCGTGACGGACCACCACGCGCTTGTGAC 550085 28 100.0 32 ............................ TACGCCTTGTCAATTCGCTCCTGATTCTGAGC 550025 28 100.0 33 ............................ CCATGCAGCTAATAGCAAGTGCGGTTGAGGAAT 549964 28 100.0 32 ............................ AGTCGACGCGTTCTGACGTTGCCAGGGTGAAC 549904 28 82.1 0 .....................AACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGTGTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGATTGCCTGGATTTATCGCCTACGGCGTGTTGGTTGGCGAAGTGCTGGTGCCAGTCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGCGAAACGTTCGCCCTCGATAAGGTTGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGTTACGCGGTGGGGAAAGACCCAGCGTGGCGTTGAGGTTTGGGCTCGGGTATGAAGGAAGGGGTCTACGGACCCTTTTTTATTGGCTATTTGTAACTCATTGATTTTATTGTGCTGAAATGTATGCAAAGAAAAAAAGGGGTTGAGACGATTTTTTTAGGTAATTTCTTTATCTGACAAGATGATAGGTGTAGATTGTTCCA # Right flank : TCTAGTTCGGTCAAACACTGTGCTGCCTGTTTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAAGAGCCTGCATGGATAAAGTAGGTCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGCATGTAAAAAGTAGGCCGGGTAAACGCAGTGCCACCCGACAAAAAGCCTGCATGGATAAAGTAGGTCGGGTAAACGCAGTGCCACCCGACAAAAAGCCTGAATGGATAAGGTAGGTCGGGTAAGCGCAGTGCCACCCGACAAAAAGCCTGGCTGGAAAAAGTAGGCCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGCATGGATAAGATAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAACGGCGGCACCGCGTCAGATTATGCGAGAACTAAATCCCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAACTTCCGCGTCGGAGAGCGTCATGGTGCTGGTGACGGTATACTCCCCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //