Array 1 208092-206168 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBE01000001.1 Lactobacillus helveticus strain TMW 12286 seq1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 208091 29 100.0 32 ............................. AAACCTCTGTTTTTTCTTGTAGTACAGAAAAG 208030 29 100.0 32 ............................. GTAATATCCAAGAAATCAAAAATAAGTTATGA 207969 29 100.0 32 ............................. GTAAGACCGGTTCCAATTGAAAAAATACAGGC 207908 29 96.6 32 ............................C AGAGTTAGGCAAGCAAAGCCAGTAGCGCTTAA 207847 29 96.6 32 ............................C GATCATAACTTTCATCTGTTCGAATCCCAATT 207786 29 96.6 32 ............................C ATGCATCCTTAAAAGCAAAAAGGTCATAATAG 207725 29 100.0 32 ............................. AGTCCATAGTGTCAACGACTTTAAACTTAAGG 207664 29 96.6 32 ............................C CACCTACAAATTGAATCATGCAGTCACCTTCT 207603 29 100.0 32 ............................. AAGGAATGTAAAAAATTAGGCTATGAAGTAAA 207542 29 100.0 32 ............................. GAGACAGTCAATGCTTATCCTATCTATGATTG 207481 29 100.0 32 ............................. GCCTTTGGCTTGTTTCTTGCGCCAGTCACCCA 207420 29 100.0 32 ............................. CAGGCAAAGGAATTCATGCGATTTTCAAAGGC 207359 29 96.6 32 ............................C ATCATCAAGGGTCAAAACGCCATCTTGTACTA 207298 29 100.0 32 ............................. GCTATTAAAGTCTGGACTATCTAATGTTTGAG 207237 29 100.0 32 ............................. CTGCATTAGATTGACGATTGCATAAATTTCAA 207176 29 100.0 33 ............................. AAACCAGATGCACCAGCTAGCTATAACGCCACA 207114 29 100.0 32 ............................. GCAGGTTATCAAAGAAGCGGGATACAAGCCAT 207053 29 96.6 33 ............................C TTGCAATGCTGGATTTCTAAAACCAATGGAGAA 206991 29 96.6 32 ............................C TTGCTGCGGAACTGGCTTCTTTAGCTCTGCCG 206930 29 96.6 32 ............................C CACTCTGCTAGCGTGACACGGGCAAGAGAAGA 206869 29 96.6 32 ............................C AACCCCAGTAGAAATGGAGCTAGTACACTAAG 206808 29 100.0 32 ............................. TTGTAAAAAGATATTGGACTAAGAAAAGGAGT 206747 29 96.6 32 ............................C TACAAAGAATGGCTACAAAGCATTAATGATGA 206686 29 100.0 32 ............................. TTCTTTACTGATATAATTTTACTTATTTTTTA 206625 29 96.6 32 ............................C AAGGCGGTAGTATTGAAAACTTAATGCATATT 206564 29 96.6 32 ............................C TGTGGTTATCGTGTCTCGTTGATCTTTTATCA 206503 29 96.6 32 ............................C TAGTGGCATTACTGAAAATGTAATGTCTTGGG 206442 29 96.6 32 ............................C ATATAAAAATGATGAAAGAATAGACGGCTATG 206381 29 100.0 33 ............................. TGATGGATATAGTCAATACACTATAGTTAAAGA 206319 29 96.6 32 ............................C AACAAGTTCAACGGTCCAATCGTCAGATATTA 206258 29 100.0 33 ............................. TAGAGAATATCAAAAGAAGCATCCCAAAAAGCG 206196 29 72.4 0 .....................CAACCAAA | ========== ====== ====== ====== ============================= ================================= ================== 32 29 97.5 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : AGTGATATCCCTTTTTAGCATGATGATCAACTTGAGTTAAAGCAGCATCCTTATAGATAGTAGCAATGTGCTTTAAGCGAATGATCTTAGTATTAGATGAGAGATAATCGCTCTTATTGAAAGCTGGAGCTTTCTTTTCTGTAGTAGAACTTTGAGACTGATTAGAGTTCTGTACTACTTGAGTATTTGATTGAGCATTTGATTGAGCATTGCTAACAGCATCGGCTTGAACGTGATTAGTAGAAACAATTCCTGCACCAAGCAAAACTGCCACGATAGCTGTGTTCCACTTTGTCTTTTTCAACATATATTTTCTCCTCCATAATTTTTGGAAATTCATTGGTTATTTTACTCGTGTTTTAGAAGTTTTTAAATTAGGAAGGAAGAATTTAAAATGAGTAGAAGATATAAATAAAAAAGAATAAAATAAATAGGATGAAACTGAATAAATTTTAGTTTTCATAAAATTGAAATGGCTCAATGATAAGGGATCTTTTAGT # Right flank : AACAGGACTAACTCAGCCAGATTAGTCCTATTTTTCATCTATATTAAAATATTTCTTCGCTGCATCGCTCATGCGATCAGGCGTCCAGACCGGATACCAAACAAATTCAACATCAACATTTTTTACTTCCGGCACTTTTTTAACTGCCTGAGTAATGCTATCAATTAGGTAGCCAGTTAACGGACAAGTAGGGGTAGTCAAAGTCATATTGATTAAACAGATTCCATCTTTGTCCAGATCGATTTCATAAATTAGACCTAAATTGACTACATCAACATTCAATTCTGGATCGATAACTGTCGCCAATTGATTGATAATATCGTTTTTAATTGTTTCACCGTCACGCATTTTGTCACGCATCCTTGCCAAAAATTTTAGCTTTGATTGCTTGGCCGGTTGGAGTACCGGCTAAGCCGCCGATTCCGGTCTCACGCAGGGATGCTGGCATTTGATGACCAACTTTTTTCATAGCATCGATACATTCGTCGGCTGGGATCACG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //