Array 1 7954-9903 **** Predicted by CRISPRDetect 2.4 *** >NZ_AEMI01000021.1 Leuconostoc gelidum subsp. gelidum KCTC 3527 contig00021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7954 36 100.0 30 .................................... CACCCTTGGGTGCCTTTAATTCAGCAGGTA 8020 36 100.0 30 .................................... TATATGATAACTGTACTGTGTGTATTTCAG 8086 36 100.0 30 .................................... AATACAGATGAGTTATATAGGTTATTTAGT 8152 36 100.0 30 .................................... TAAAACATATTATCTTGAGCAGTACATTGT 8218 36 100.0 30 .................................... AGAAATAAGCAATCTGTCCTACCTTTGCAT 8284 36 100.0 30 .................................... TATCATGCATAGCTTGATACAACTGCCTAG 8350 36 100.0 30 .................................... TCAACGCGCGAGACTAGAGTTTATAATTCT 8416 36 100.0 30 .................................... AGAAATAAGCAATCTGTCCTACCTTTGCAT 8482 36 100.0 30 .................................... TATCATGCATAGCTTGATACGACTGCCTAG 8548 36 100.0 30 .................................... TTAACTTTAGGAAAAAATCAGTGAGCATTA 8614 36 100.0 30 .................................... CCGTTTCTGTATACAAGCCCCAGAAACGGG 8680 36 100.0 30 .................................... GCCAATATTTTAAAAATCTGCCTAGTTGTT 8746 36 100.0 30 .................................... TGGGCTGATAAGCAGAAAAACAACACGACT 8812 36 100.0 30 .................................... TTCACGCGTGGTTGAAGCTGTTTATTAGTA 8878 36 100.0 30 .................................... AAGCTGTTAATCCACTACCAGACACTTGAA 8944 36 100.0 30 .................................... TGCAATATATATTAGAGCCTATAATTCTAA 9010 36 100.0 30 .................................... CAACATCAATCAGTGGAGCGTTGACTTCTT 9076 36 100.0 30 .................................... AGTATAACGGTAGCTCCGTGATAATCTCAT 9142 36 100.0 30 .................................... AATTATATTAAACTTACTAAGTTTCATACA 9208 36 100.0 30 .................................... TTTAAACCGCGAACTTCTAGCAAAGCACTG 9274 36 100.0 30 .................................... CACGGCTAAAGCCAACAGTGACGCTAGTAT 9340 36 100.0 30 .................................... CTACGTACGTAAGGATAAGGACTCAGATAG 9406 36 100.0 30 .................................... TAGTAGCCAACAGTTCTATTACCAACTTGA 9472 36 100.0 30 .................................... ACTCAACTGGCTTTGAGCCATCAATCACGT 9538 36 100.0 30 .................................... GATCACGTATTGTGCTTCTTCGATTGAATA 9604 36 100.0 30 .................................... TAATACATTAGGTCAAGTGTATAAGTCTAC 9670 36 100.0 30 .................................... GCAAACGGATTGGACTTCAAGGCAAATTGC 9736 36 100.0 30 .................................... TCTAACATCTTCAACGTTTTCATTGAGCAT 9802 36 97.2 30 ...................................T CATTGGTCGCATCAGCAAGAACACCATTCG 9868 36 94.4 0 ..............................C...A. | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.7 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCCGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAACAATCTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAGGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : CTTATATACATGGCAATCTATATTGAAATTAAATACCATATTAATAAGATTAAAGCGCTTAGGCGCTTTTTATATGCCATACATGTCAAAAAAGAAGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCAAGTGAAAGAATTACTTGTTTCAACAATAATTATTGGTGGCGTTCTGGGCACGATGTCTACGGTTAATGCTGCTGAAAATACAGCACATGTATCGACACAAGTGTCAAGTACAACCGTATCAGGTTCGAGTGCTGTATCACAAGCGCCAAGCACTAAGGCATCAAGTTCAACAATAAATGAGTCTAAAAAAAATGATAGTTATAATGTAACGCCGTCAACTCGATCTATTCAAATATCTCCAGCCAAATTTAAAACCGGTTCTGTAATCGCATTGACTAATTCAGCAAAAACGTCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //